Guide to the Human Genome
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Search of human proteins with 133908616

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|133908616 glycerol-3-phosphate dehydrogenase 2,
mitochondrial [Homo sapiens]
         (727 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial...  1445   0.0  
gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial...  1445   0.0  
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]         49   1e-05
gi|58218968 calmodulin 3 [Homo sapiens]                                48   3e-05
gi|4502549 calmodulin 2 [Homo sapiens]                                 48   3e-05
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]         48   3e-05
gi|5901912 calmodulin 1 [Homo sapiens]                                 48   3e-05
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]         48   4e-05
gi|223278387 calmodulin-like 5 [Homo sapiens]                          47   8e-05
gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens]     46   1e-04
gi|4885111 calmodulin-like 3 [Homo sapiens]                            45   2e-04
gi|23312386 serine/threonine protein phosphatase with EF-hand mo...    45   2e-04
gi|32698884 calcium binding protein 7 [Homo sapiens]                   44   5e-04
gi|14249340 phospholipase C, delta 4 [Homo sapiens]                    44   7e-04
gi|11067753 calcium binding protein 5 [Homo sapiens]                   43   0.001
gi|63054822 calneuron 1 isoform 2 [Homo sapiens]                       43   0.001
gi|157743275 calneuron 1 isoform 1 [Homo sapiens]                      43   0.001
gi|223718250 plastin 1 [Homo sapiens]                                  43   0.001
gi|223718246 plastin 1 [Homo sapiens]                                  43   0.001
gi|4757902 caltractin [Homo sapiens]                                   42   0.002
gi|23312378 protein phosphatase with EF hand calcium-binding dom...    42   0.002
gi|23312374 protein phosphatase with EF hand calcium-binding dom...    42   0.002
gi|23312380 protein phosphatase with EF hand calcium-binding dom...    42   0.002
gi|4757974 centrin 1 [Homo sapiens]                                    42   0.002
gi|21264326 rhomboid protease 3 [Homo sapiens]                         42   0.002
gi|4507615 troponin C, slow [Homo sapiens]                             42   0.003
gi|21624641 calcium binding protein 4 [Homo sapiens]                   41   0.003
gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo ...    41   0.003
gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo sapi...    41   0.004
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]        41   0.004

>gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial
           [Homo sapiens]
          Length = 727

 Score = 1445 bits (3740), Expect = 0.0
 Identities = 727/727 (100%), Positives = 727/727 (100%)

Query: 1   MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ 60
           MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ
Sbjct: 1   MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ 60

Query: 61  LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR 120
           LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR
Sbjct: 61  LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR 120

Query: 121 YLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLY 180
           YLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLY
Sbjct: 121 YLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLY 180

Query: 181 DLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYG 240
           DLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYG
Sbjct: 181 DLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYG 240

Query: 241 AATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEFDVRAKCVINATGPFTDSVRKM 300
           AATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEFDVRAKCVINATGPFTDSVRKM
Sbjct: 241 AATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEFDVRAKCVINATGPFTDSVRKM 300

Query: 301 DDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPWQKMTIAGTTDTPTD 360
           DDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPWQKMTIAGTTDTPTD
Sbjct: 301 DDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPWQKMTIAGTTDTPTD 360

Query: 361 VTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSADTQSISRNH 420
           VTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSADTQSISRNH
Sbjct: 361 VTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSADTQSISRNH 420

Query: 421 VVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVGLFLQGGKDWSPTLY 480
           VVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVGLFLQGGKDWSPTLY
Sbjct: 421 VVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVGLFLQGGKDWSPTLY 480

Query: 481 IRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRLVSEFPYIEAEVKYG 540
           IRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRLVSEFPYIEAEVKYG
Sbjct: 481 IRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRLVSEFPYIEAEVKYG 540

Query: 541 IKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLY 600
           IKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLY
Sbjct: 541 IKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLY 600

Query: 601 YEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMD 660
           YEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMD
Sbjct: 601 YEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMD 660

Query: 661 ENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPIPV 720
           ENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPIPV
Sbjct: 661 ENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPIPV 720

Query: 721 DRSCGGL 727
           DRSCGGL
Sbjct: 721 DRSCGGL 727


>gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial
           [Homo sapiens]
          Length = 727

 Score = 1445 bits (3740), Expect = 0.0
 Identities = 727/727 (100%), Positives = 727/727 (100%)

Query: 1   MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ 60
           MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ
Sbjct: 1   MAFQKAVKGTILVGGGALATVLGLSQFAHYRRKQMNLAYVKAADCISEPVNREPPSREAQ 60

Query: 61  LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR 120
           LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR
Sbjct: 61  LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR 120

Query: 121 YLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLY 180
           YLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLY
Sbjct: 121 YLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLY 180

Query: 181 DLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYG 240
           DLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYG
Sbjct: 181 DLVAGSNCLKSSYVLSKSRALEHFPMLQKDKLVGAIVYYDGQHNDARMNLAIALTAARYG 240

Query: 241 AATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEFDVRAKCVINATGPFTDSVRKM 300
           AATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEFDVRAKCVINATGPFTDSVRKM
Sbjct: 241 AATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEFDVRAKCVINATGPFTDSVRKM 300

Query: 301 DDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPWQKMTIAGTTDTPTD 360
           DDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPWQKMTIAGTTDTPTD
Sbjct: 301 DDKDAAAICQPSAGVHIVMPGYYSPESMGLLDPATSDGRVIFFLPWQKMTIAGTTDTPTD 360

Query: 361 VTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSADTQSISRNH 420
           VTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSADTQSISRNH
Sbjct: 361 VTHHPIPSEEDINFILNEVRNYLSCDVEVRRGDVLAAWSGIRPLVTDPKSADTQSISRNH 420

Query: 421 VVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVGLFLQGGKDWSPTLY 480
           VVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVGLFLQGGKDWSPTLY
Sbjct: 421 VVDISESGLITIAGGKWTTYRSMAEDTINAAVKTHNLKAGPSRTVGLFLQGGKDWSPTLY 480

Query: 481 IRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRLVSEFPYIEAEVKYG 540
           IRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRLVSEFPYIEAEVKYG
Sbjct: 481 IRLVQDYGLESEVAQHLAATYGDKAFEVAKMASVTGKRWPIVGVRLVSEFPYIEAEVKYG 540

Query: 541 IKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLY 600
           IKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLY
Sbjct: 541 IKEYACTAVDMISRRTRLAFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLY 600

Query: 601 YEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMD 660
           YEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMD
Sbjct: 601 YEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMD 660

Query: 661 ENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPIPV 720
           ENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPIPV
Sbjct: 661 ENTLHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPIPV 720

Query: 721 DRSCGGL 727
           DRSCGGL
Sbjct: 721 DRSCGGL 727


>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
          Length = 167

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 21/74 (28%), Positives = 43/74 (58%)

Query: 615 RSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLN 674
           R + SL P +I+  ++ F +FD D+ G+I   D+   + ++     E  L E+  ++++N
Sbjct: 14  RKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN 73

Query: 675 KNGQVELNEFLQLM 688
             G V+ ++F++LM
Sbjct: 74  LGGHVDFDDFVELM 87



 Score = 39.7 bits (91), Expect = 0.010
 Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 625 IDRYKKRFHKFDADQKGFITIVDVQRVLESI-NVQMDENTLHEILNEVDLNKNGQVELNE 683
           +   +  F +FD +  G I+  +++  +  +   Q+    + EI+ +VDLN +G+V+  E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160

Query: 684 FLQLMS 689
           F+++MS
Sbjct: 161 FVRMMS 166


>gi|58218968 calmodulin 3 [Homo sapiens]
          Length = 149

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 620 LLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQV 679
           L    I  +K+ F  FD D  G IT  ++  V+ S+     E  L +++NEVD + NG +
Sbjct: 5   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 680 ELNEFLQLMSAIQK 693
           +  EFL +M+   K
Sbjct: 65  DFPEFLTMMARKMK 78



 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 18/65 (27%), Positives = 41/65 (63%)

Query: 626 DRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFL 685
           +  ++ F  FD D  G+I+  +++ V+ ++  ++ +  + E++ E D++ +GQV   EF+
Sbjct: 84  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143

Query: 686 QLMSA 690
           Q+M+A
Sbjct: 144 QMMTA 148


>gi|4502549 calmodulin 2 [Homo sapiens]
          Length = 149

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 620 LLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQV 679
           L    I  +K+ F  FD D  G IT  ++  V+ S+     E  L +++NEVD + NG +
Sbjct: 5   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 680 ELNEFLQLMSAIQK 693
           +  EFL +M+   K
Sbjct: 65  DFPEFLTMMARKMK 78



 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 18/65 (27%), Positives = 41/65 (63%)

Query: 626 DRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFL 685
           +  ++ F  FD D  G+I+  +++ V+ ++  ++ +  + E++ E D++ +GQV   EF+
Sbjct: 84  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143

Query: 686 QLMSA 690
           Q+M+A
Sbjct: 144 QMMTA 148


>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
          Length = 227

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 559 AFLNVQAAEEALPRIVELMGRELNWDDYKKQEQLETARKFLYYEMGYKSRSEQLTDRSEI 618
           +++ VQ +EE L    EL G  L                 ++   G+    +   DRS  
Sbjct: 23  SYMVVQTSEEGLAADAELPGPLLMLAQNCAVMHNLLGPACIFLRKGFAENRQP--DRS-- 78

Query: 619 SLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQ 678
            L P +I+  ++ F +FD D+ G+I   D+   + ++     E  L E+  ++++N  G 
Sbjct: 79  -LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 137

Query: 679 VELNEFLQLM 688
           V+ ++F++LM
Sbjct: 138 VDFDDFVELM 147



 Score = 39.7 bits (91), Expect = 0.010
 Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 625 IDRYKKRFHKFDADQKGFITIVDVQRVLESI-NVQMDENTLHEILNEVDLNKNGQVELNE 683
           +   +  F +FD +  G I+  +++  +  +   Q+    + EI+ +VDLN +G+V+  E
Sbjct: 161 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 220

Query: 684 FLQLMS 689
           F+++MS
Sbjct: 221 FVRMMS 226


>gi|5901912 calmodulin 1 [Homo sapiens]
          Length = 149

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 620 LLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQV 679
           L    I  +K+ F  FD D  G IT  ++  V+ S+     E  L +++NEVD + NG +
Sbjct: 5   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 680 ELNEFLQLMSAIQK 693
           +  EFL +M+   K
Sbjct: 65  DFPEFLTMMARKMK 78



 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 18/65 (27%), Positives = 41/65 (63%)

Query: 626 DRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFL 685
           +  ++ F  FD D  G+I+  +++ V+ ++  ++ +  + E++ E D++ +GQV   EF+
Sbjct: 84  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143

Query: 686 QLMSA 690
           Q+M+A
Sbjct: 144 QMMTA 148


>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
          Length = 370

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 20/70 (28%), Positives = 41/70 (58%)

Query: 619 SLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQ 678
           SL P +I+  ++ F +FD D+ G+I   D+   + ++     E  L E+  ++++N  G 
Sbjct: 221 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 280

Query: 679 VELNEFLQLM 688
           V+ ++F++LM
Sbjct: 281 VDFDDFVELM 290



 Score = 39.7 bits (91), Expect = 0.010
 Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 625 IDRYKKRFHKFDADQKGFITIVDVQRVLESI-NVQMDENTLHEILNEVDLNKNGQVELNE 683
           +   +  F +FD +  G I+  +++  +  +   Q+    + EI+ +VDLN +G+V+  E
Sbjct: 304 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 363

Query: 684 FLQLMS 689
           F+++MS
Sbjct: 364 FVRMMS 369


>gi|223278387 calmodulin-like 5 [Homo sapiens]
          Length = 146

 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 620 LLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQV 679
           L P +  +YKK F   D D  G I   ++   L++    + E  L ++++EVD + +G++
Sbjct: 5   LTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEI 64

Query: 680 ELNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPI-PVDRSCGGL 727
              EFL   +A +K R     L +  +  +++ D  + +  + R+  GL
Sbjct: 65  SFQEFL---TAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGL 110



 Score = 39.3 bits (90), Expect = 0.013
 Identities = 15/58 (25%), Positives = 34/58 (58%)

Query: 632 FHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLMS 689
           F  FD D  G IT+ +++R +  +   + +  L  ++ E D++++G+V   EF ++++
Sbjct: 87  FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 144


>gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens]
          Length = 866

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 37/261 (14%)

Query: 45  CISEPVNREPPSREAQLLTLQNTSEFDILVIGGGATGSGCALDAVTRGLK-TALVERDDF 103
           C  E   + P S E Q      T     ++IGGG  G   A      G+K   L+E+ + 
Sbjct: 30  CGREGEEKPPLSAETQWKDRAET-----VIIGGGCVGVSLAYHLAKAGMKDVVLLEKSEL 84

Query: 104 SSGTSSRS---TKLIHGGVRYLQKAIMKLDIEQYRMVKEALHERANLLEIAPHLSAPLPI 160
           ++G++  +   T   H G+    K I    I+ Y  ++E   +     +      A  P+
Sbjct: 85  TAGSTWHAAGLTTYFHPGINL--KKIHYDSIKLYEKLEEETGQVVGFHQPGSIRLATTPV 142

Query: 161 MLPVYKWWQLPYYWVGIKLYDLVAGSNCLKSSYVLSKSRALEHFPMLQKDK-LVGAIVYY 219
            +  +K+      W   +              Y++   +  E FP+L  +K L G     
Sbjct: 143 RVDEFKYQMTRTGWHATE-------------QYLIEPEKIQEMFPLLNMNKVLAGLYNPG 189

Query: 220 DGQHNDARMNLAIALTAARYGAATANYMEVVSLLKKTDPQTGKVHVSGARCKDVLTGQEF 279
           DG  +   + +A+A  A + GA       V SL  ++D              DV T Q  
Sbjct: 190 DGHIDPYSLTMALAAGARKCGALLKYPAPVTSLKARSDGTW-----------DVETPQG- 237

Query: 280 DVRAKCVINATGPFTDSVRKM 300
            +RA  ++NA G +   V KM
Sbjct: 238 SMRANRIVNAAGFWAREVGKM 258


>gi|4885111 calmodulin-like 3 [Homo sapiens]
          Length = 149

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%)

Query: 620 LLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQV 679
           L    +  +K+ F  FD D  G IT  ++  V+ S+     E  L ++++E+D + NG V
Sbjct: 5   LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 64

Query: 680 ELNEFLQLMSAIQK 693
           +  EFL +M+   K
Sbjct: 65  DFPEFLGMMARKMK 78



 Score = 40.0 bits (92), Expect = 0.008
 Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 603 MGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDEN 662
           +G  +R  + TD  E           ++ F  FD D  GF++  +++ V+  +  ++ + 
Sbjct: 70  LGMMARKMKDTDNEE---------EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE 120

Query: 663 TLHEILNEVDLNKNGQVELNEFLQLM 688
            + E++   D + +GQV   EF++++
Sbjct: 121 EVDEMIRAADTDGDGQVNYEEFVRVL 146


>gi|23312386 serine/threonine protein phosphatase with EF-hand
           motifs 2 [Homo sapiens]
          Length = 753

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 15/130 (11%)

Query: 581 LNWDDYKKQEQLETARKFLYYEMGYKSRSEQLTDRSEI--SLLPSDIDRYKKR------F 632
           L W   + Q    +A   L Y+   K+ +++   R  I  SLL +    Y+ R      F
Sbjct: 605 LPWRMLRPQLVNSSADNMLEYKSWLKNLAKEQLSRENIQSSLLET---LYRNRSNLETIF 661

Query: 633 HKFDADQKGFITIVDVQRVLE----SINVQMDENTLHEILNEVDLNKNGQVELNEFLQLM 688
              D+D  GFI++ + ++  +     +N+ + ++ + ++   +D NK+G +++NEFL+  
Sbjct: 662 RIIDSDHSGFISLDEFRQTWKLFSSHMNIDITDDCICDLARSIDFNKDGHIDINEFLEAF 721

Query: 689 SAIQKGRVSG 698
             ++K    G
Sbjct: 722 RLVEKSCPEG 731


>gi|32698884 calcium binding protein 7 [Homo sapiens]
          Length = 215

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 19/77 (24%), Positives = 43/77 (55%)

Query: 612 LTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEV 671
           L+++  + +   +++  ++ F  FD D  GFI+  ++   + S+    +E  L  I+  +
Sbjct: 22  LSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL 81

Query: 672 DLNKNGQVELNEFLQLM 688
           D++ +GQV+  EF+ L+
Sbjct: 82  DMDGDGQVDFEEFVTLL 98


>gi|14249340 phospholipase C, delta 4 [Homo sapiens]
          Length = 762

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 20/62 (32%), Positives = 36/62 (58%)

Query: 632 FHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLMSAI 691
           F + D +Q G ++  +VQR+L  +NV+MD+     +    D +++G +E  EF+Q   A+
Sbjct: 143 FQRGDKNQDGKMSFQEVQRLLHLMNVEMDQEYAFSLFQAADTSQSGTLEGEEFVQFYKAL 202

Query: 692 QK 693
            K
Sbjct: 203 TK 204


>gi|11067753 calcium binding protein 5 [Homo sapiens]
          Length = 173

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 18/66 (27%), Positives = 41/66 (62%)

Query: 624 DIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNE 683
           +I+  ++ F +FD D+ GFI+  D+  ++ ++     E  L E+  ++ +N  G+V+ ++
Sbjct: 29  EIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIRMNLGGRVDFDD 88

Query: 684 FLQLMS 689
           F++LM+
Sbjct: 89  FVELMT 94



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 625 IDRYKKRFHKFDADQKGFITIVDVQRVLESI-NVQMDENTLHEILNEVDLNKNGQVELNE 683
           +   +  F +FD +  G IT+V++Q+ ++ +   ++    + E++ E D+N +G V+  E
Sbjct: 107 VQEMRDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEE 166

Query: 684 FLQLMS 689
           F+++MS
Sbjct: 167 FVKMMS 172


>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
          Length = 219

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 599 LYYEMGYKSRSEQLTDRSE--ISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESIN 656
           L Y+  Y +RS      SE   ++   ++D  ++ F   D D  GFI+  ++   + S+ 
Sbjct: 10  LLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLG 69

Query: 657 VQMDENTLHEILNEVDLNKNGQVELNEFLQLM 688
               E  L  I+  +D++ +GQV+ +EF+ ++
Sbjct: 70  YMPSEVELAIIMQRLDMDGDGQVDFDEFMTIL 101


>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
          Length = 261

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 599 LYYEMGYKSRSEQLTDRSE--ISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESIN 656
           L Y+  Y +RS      SE   ++   ++D  ++ F   D D  GFI+  ++   + S+ 
Sbjct: 52  LLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLG 111

Query: 657 VQMDENTLHEILNEVDLNKNGQVELNEFLQLM 688
               E  L  I+  +D++ +GQV+ +EF+ ++
Sbjct: 112 YMPSEVELAIIMQRLDMDGDGQVDFDEFMTIL 143


>gi|223718250 plastin 1 [Homo sapiens]
          Length = 629

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/97 (20%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 614 DRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEV-- 671
           + S  ++   +++  ++ F+K D D  G+++  ++Q + +  ++ +    + EI+ ++  
Sbjct: 2   ENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILS 61

Query: 672 --DLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMK 706
             D NK+G++   EF+ LM  ++   +S +   I+ K
Sbjct: 62  VADSNKDGKISFEEFVSLMQELKSKDISKTFRKIINK 98


>gi|223718246 plastin 1 [Homo sapiens]
          Length = 629

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/97 (20%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 614 DRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEV-- 671
           + S  ++   +++  ++ F+K D D  G+++  ++Q + +  ++ +    + EI+ ++  
Sbjct: 2   ENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILS 61

Query: 672 --DLNKNGQVELNEFLQLMSAIQKGRVSGSRLAILMK 706
             D NK+G++   EF+ LM  ++   +S +   I+ K
Sbjct: 62  VADSNKDGKISFEEFVSLMQELKSKDISKTFRKIINK 98


>gi|4757902 caltractin [Homo sapiens]
          Length = 172

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 19/59 (32%), Positives = 36/59 (61%)

Query: 630 KRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLM 688
           K F  FD D+ G I+  +++RV + +   + +  L E+++E D + +G+V   EFL++M
Sbjct: 108 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166



 Score = 36.6 bits (83), Expect = 0.085
 Identities = 18/95 (18%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 595 ARKFLYYEMGYKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLES 654
           A  F    M   S+ ++++ + E++         ++ F  FDAD  G I + +++  + +
Sbjct: 2   ASNFKKANMASSSQRKRMSPKPELT--EEQKQEIREAFDLFDADGTGTIDVKELKVAMRA 59

Query: 655 INVQMDENTLHEILNEVDLNKNGQVELNEFLQLMS 689
           +  +  +  + ++++E+D    G++   +FL +M+
Sbjct: 60  LGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMT 94


>gi|23312378 protein phosphatase with EF hand calcium-binding domain
           1 isoform 3 [Homo sapiens]
          Length = 591

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 632 FHKFDADQKGFITIVDVQRVLESI----NVQMDENTLHEILNEVDLNKNGQVELNEFLQL 687
           F+  D D  G I++ + + + +      NV +D++ ++++ N +DLNK+G ++ NEFL+ 
Sbjct: 513 FNAIDTDHSGLISVEEFRAMWKLFSSHYNVHIDDSQVNKLANIMDLNKDGSIDFNEFLKA 572

Query: 688 MSAIQK 693
              + +
Sbjct: 573 FYVVHR 578


>gi|23312374 protein phosphatase with EF hand calcium-binding domain
           1 isoform 1b [Homo sapiens]
          Length = 625

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 632 FHKFDADQKGFITIVDVQRVLESI----NVQMDENTLHEILNEVDLNKNGQVELNEFLQL 687
           F+  D D  G I++ + + + +      NV +D++ ++++ N +DLNK+G ++ NEFL+ 
Sbjct: 547 FNAIDTDHSGLISVEEFRAMWKLFSSHYNVHIDDSQVNKLANIMDLNKDGSIDFNEFLKA 606

Query: 688 MSAIQK 693
              + +
Sbjct: 607 FYVVHR 612


>gi|23312380 protein phosphatase with EF hand calcium-binding domain
           1 isoform 1 [Homo sapiens]
          Length = 653

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 632 FHKFDADQKGFITIVDVQRVLESI----NVQMDENTLHEILNEVDLNKNGQVELNEFLQL 687
           F+  D D  G I++ + + + +      NV +D++ ++++ N +DLNK+G ++ NEFL+ 
Sbjct: 575 FNAIDTDHSGLISVEEFRAMWKLFSSHYNVHIDDSQVNKLANIMDLNKDGSIDFNEFLKA 634

Query: 688 MSAIQK 693
              + +
Sbjct: 635 FYVVHR 640


>gi|4757974 centrin 1 [Homo sapiens]
          Length = 172

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 19/59 (32%), Positives = 35/59 (59%)

Query: 630 KRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLM 688
           K F  FD D+ G I+  +++RV   +   + +  L E+++E D + +G+V   EFL++M
Sbjct: 108 KAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166



 Score = 35.0 bits (79), Expect = 0.25
 Identities = 14/61 (22%), Positives = 34/61 (55%)

Query: 629 KKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLM 688
           ++ F  FD D  G I   +++  + ++  +  +  + ++++EVD    G++  N+FL +M
Sbjct: 34  REAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVM 93

Query: 689 S 689
           +
Sbjct: 94  T 94


>gi|21264326 rhomboid protease 3 [Homo sapiens]
          Length = 404

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 608 RSEQLTDRSEISLLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEI 667
           R E+L   +E  L  +  D +K  F +FD    G+I+    + +LES + ++D +    +
Sbjct: 19  RIEELEPEAEERLPAAPEDHWKVLFDQFDPGNTGYISTGKFRSLLESHSSKLDPHKREVL 78

Query: 668 LNEVDLNKNGQVELNEFLQLMSAIQKGRVSGSRLAIL 704
           L   D + +GQ+   +F+ LMS     R +  R AIL
Sbjct: 79  LALADSHADGQIGYQDFVSLMS---NKRSNSFRQAIL 112


>gi|4507615 troponin C, slow [Homo sapiens]
          Length = 161

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 15/61 (24%), Positives = 38/61 (62%)

Query: 632 FHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQLMSAI 691
           F  FD +  G+I + +++ +L++    + E+ + E++ + D N +G+++ +EFL+ M  +
Sbjct: 101 FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160

Query: 692 Q 692
           +
Sbjct: 161 E 161



 Score = 37.4 bits (85), Expect = 0.050
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 12/113 (10%)

Query: 605 YKSRSEQLTDRSEISLLPSDIDRYKKRFHKFDAD-QKGFITIVDVQRVLESINVQMDENT 663
           YK+  EQLT+  +        + +K  F  F    + G I+  ++ +V+  +        
Sbjct: 5   YKAAVEQLTEEQK--------NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEE 56

Query: 664 LHEILNEVDLNKNGQVELNEFLQLMSAIQKGRVSG---SRLAILMKTAEENLD 713
           L E+++EVD + +G V+ +EFL +M    K    G     L+ L +  ++N D
Sbjct: 57  LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNAD 109


>gi|21624641 calcium binding protein 4 [Homo sapiens]
          Length = 275

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 632 FHKFDADQKGFITIVDVQRVLESI-NVQMDENTLHEILNEVDLNKNGQVELNEFLQLMS 689
           F +FD D+ G IT+ +++  + ++    +    L E+L EVDLN +G V+ +EF+ ++S
Sbjct: 215 FREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMMLS 273



 Score = 39.7 bits (91), Expect = 0.010
 Identities = 16/67 (23%), Positives = 36/67 (53%)

Query: 622 PSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVEL 681
           P ++D  +  F +FD D+ G+I+  ++   + ++     E  L E+   + +   G+V+ 
Sbjct: 128 PEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHIKMRMGGRVDF 187

Query: 682 NEFLQLM 688
            EF++L+
Sbjct: 188 EEFVELI 194


>gi|148491091 solute carrier family 25 member 24 isoform 1 [Homo
           sapiens]
          Length = 477

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 19/90 (21%), Positives = 48/90 (53%), Gaps = 6/90 (6%)

Query: 627 RYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVELNEFLQ 686
           RY+  F   D +  G + I ++Q  L ++ + + ++   +I    D+NK+G+++  EF++
Sbjct: 23  RYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMK 82

Query: 687 LMSAIQKGRVSGSRLAILMKTAEENLDRRV 716
            +   +K      ++ +  K+ ++N D ++
Sbjct: 83  YLKDHEK------KMKLAFKSLDKNNDGKI 106


>gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
           sapiens]
          Length = 147

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 621 LPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVE 680
           LPS ++ +K+++ +FD +  G I I+ ++R+LE + V      L +++ EV         
Sbjct: 43  LPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFS 102

Query: 681 LNEFLQLM 688
             +FL++M
Sbjct: 103 YPDFLRMM 110


>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
          Length = 163

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 19/59 (32%), Positives = 39/59 (66%), Gaps = 1/59 (1%)

Query: 632 FHKFDADQKGFITIVDVQRVLESI-NVQMDENTLHEILNEVDLNKNGQVELNEFLQLMS 689
           F +FD +  G I++ +++  L+++   ++ +  + EIL +VDLN +G V+  EF+++MS
Sbjct: 104 FREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMMS 162



 Score = 35.0 bits (79), Expect = 0.25
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 620 LLPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQV 679
           L P +I+  +  F +FD D+ G+I   ++   + ++     E  L EI  ++     G+V
Sbjct: 18  LRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQI---SGGKV 74

Query: 680 ELNEFLQLM 688
           +  +F++LM
Sbjct: 75  DFEDFVELM 83


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,211,703
Number of Sequences: 37866
Number of extensions: 1060630
Number of successful extensions: 2848
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 2671
Number of HSP's gapped (non-prelim): 205
length of query: 727
length of database: 18,247,518
effective HSP length: 110
effective length of query: 617
effective length of database: 14,082,258
effective search space: 8688753186
effective search space used: 8688753186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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