RHBDL3 12753

Name: RHBDL3	Sequence: fasta or formatted (404aa)		NCBI GI: 21264326
Description: rhomboid protease 3		Referenced in: Calmodulin and Calcium Serine Proteases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 35 2 C cysteine 1.5 6 2 D aspartate 3.0 12 1 E glutamate 5.2 21 2 F phenylalanine 4.7 19 2 G glycine 6.7 27 2 H histidine 3.7 15 1 I isoleucine 3.7 15 1 K lysine 3.0 12 1 L leucine 12.6 51 2 M methionine 3.0 12 1 N asparagine 2.7 11 1 P proline 6.2 25 4 Q glutamine 3.7 15 1 R arginine 5.2 21 2 S serine 6.9 28 2 T threonine 3.2 13 1 V valine 9.9 40 3 W tryptophan 2.2 9 2 Y tyrosine 4.2 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 rhomboid protease 3 RHBDL1 0.521 rhomboid protease 1 RHBDL2 0.202 rhomboid protease 2 RHBDF1 0.036 rhomboid family 1 RHBDF2 0.036 rhomboid, veinlet-like 6 isoform 2 RHBDF2 0.036 rhomboid, veinlet-like 6 isoform 1 PLS1 0.026 plastin 1 PLS1 0.026 plastin 1 CALM3 0.025 calmodulin 3 CALM2 0.025 calmodulin 2 CALM1 0.025 calmodulin 1 CALML3 0.023 calmodulin-like 3 GPD2 0.021 glycerol-3-phosphate dehydrogenase 2, mitochondrial... GPD2 0.021 glycerol-3-phosphate dehydrogenase 2, mitochondrial... CABP7 0.019 calcium binding protein 7 MYL7 0.015 myosin light chain 2a TNNC1 0.014 troponin C, slow PDCD6 0.014 programmed cell death 6 CALML6 0.013 calmodulin-like 6 CABP2 0.013 calcium binding protein 2 isoform 2 CABP2 0.013 calcium binding protein 2 isoform 1 RYR2 0.013 cardiac muscle ryanodine receptor KATNAL2 0.011 katanin p60 subunit A-like 2 CALML5 0.011 calmodulin-like 5 EFHC1 0.011 EF-hand domain (C-terminal) containing 1 ACTN1 0.010 actinin, alpha 1 isoform c SPTAN1 0.010 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.010 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... EFCAB6 0.010 CAP-binding protein complex interacting protein 1 is... EFCAB6 0.010 CAP-binding protein complex interacting protein 1 is... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.