Guide to the Human Genome
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Name: PPEF2 Sequence: fasta or formatted (753aa) NCBI GI: 23312386
Description:

serine/threonine protein phosphatase with EF-hand motifs 2

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         43           3
 C cysteine            2.3         17           1
 D aspartate           5.8         44           2
 E glutamate           7.6         57           2
 F phenylalanine       4.6         35           2
 G glycine             4.9         37           3
 H histidine           3.3         25           2
 I isoleucine          5.0         38           2
 K lysine              5.7         43           2
 L leucine            10.5         79           2
 M methionine          2.1         16           1
 N asparagine          3.7         28           1
 P proline             3.7         28           1
 Q glutamine           4.8         36           2
 R arginine            7.2         54           3
 S serine              9.4         71           3
 T threonine           4.2         32           1
 V valine              4.8         36           2
 W tryptophan          1.3         10           1
 Y tyrosine            3.2         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine/threonine protein phosphatase with EF-hand mo... 
PPEF1                 0.206   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.206   protein phosphatase with EF hand calcium-binding dom...
PPEF1                 0.206   protein phosphatase with EF hand calcium-binding dom...
PPP5C                 0.093   protein phosphatase 5, catalytic subunit 
PPP1CA                0.062   protein phosphatase 1, catalytic subunit, alpha isof...
PPP1CC                0.062   protein phosphatase 1, catalytic subunit, gamma isofo...
PPP1CA                0.062   protein phosphatase 1, catalytic subunit, alpha isofo...
PPP1CB                0.061   protein phosphatase 1, catalytic subunit, beta isofo...
PPP1CB                0.061   protein phosphatase 1, catalytic subunit, beta isofor...
PPP1CA                0.059   protein phosphatase 1, catalytic subunit, alpha isof...
PPP2CB                0.057   protein phosphatase 2, catalytic subunit, beta isofo...
PPP2CB                0.057   protein phosphatase 2, catalytic subunit, beta isofor...
PPP4C                 0.055   protein phosphatase 4, catalytic subunit 
PPP2CA                0.054   protein phosphatase 2, catalytic subunit, alpha isofo...
PPP6C                 0.053   protein phosphatase 6, catalytic subunit isoform a ...
PPP6C                 0.053   protein phosphatase 6, catalytic subunit isoform b [H...
PPP3CA                0.051   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.051   protein phosphatase 3, catalytic subunit, alpha iso...
PPP3CA                0.051   protein phosphatase 3, catalytic subunit, alpha isofo...
PPP3CC                0.049   protein phosphatase 3, catalytic subunit, gamma [Hom...
PPP3CB                0.047   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.047   protein phosphatase 3, catalytic subunit, beta isof...
PPP3CB                0.047   protein phosphatase 3, catalytic subunit, beta isofo...
PPP6C                 0.038   protein phosphatase 6, catalytic subunit isoform c ...
FSTL5                 0.017   follistatin-like 5 isoform c 
FSTL5                 0.017   follistatin-like 5 isoform b 
FSTL5                 0.017   follistatin-like 5 isoform a 
TNNC1                 0.015   troponin C, slow 
GPD2                  0.013   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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