Guide to the Human Genome
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Name: DMGDH Sequence: fasta or formatted (866aa) NCBI GI: 24797151
Description:

dimethylglycine dehydrogenase precursor

Referenced in:

Acetylcholine
TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         55           2
 C cysteine            0.8          7           1
 D aspartate           4.3         37           2
 E glutamate           7.4         64           3
 F phenylalanine       3.2         28           1
 G glycine             9.5         82           3
 H histidine           2.3         20           1
 I isoleucine          5.1         44           2
 K lysine              6.6         57           2
 L leucine             9.8         85           3
 M methionine          2.2         19           1
 N asparagine          3.5         30           2
 P proline             5.7         49           2
 Q glutamine           4.3         37           2
 R arginine            5.1         44           2
 S serine              5.4         47           1
 T threonine           5.3         46           3
 V valine              7.2         62           2
 W tryptophan          1.8         16           1
 Y tyrosine            4.3         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dimethylglycine dehydrogenase precursor 
SARDH                 0.233   sarcosine dehydrogenase precursor 
SARDH                 0.233   sarcosine dehydrogenase precursor 
PDPR                  0.194   pyruvate dehydrogenase phosphatase regulatory subun...
AMT                   0.038   aminomethyltransferase 
FOXRED1               0.022   FAD-dependent oxidoreductase domain containing 1 [Hom...
PIPOX                 0.020   pipecolic acid oxidase 
GPD2                  0.012   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
GPD2                  0.012   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
SMOX                  0.004   spermine oxidase isoform 4 
SMOX                  0.004   spermine oxidase isoform 3 
SMOX                  0.004   spermine oxidase isoform 2 
SMOX                  0.004   spermine oxidase isoform 1 
L2HGDH                0.004   L-2-hydroxyglutarate dehydrogenase precursor 
LOC100129538          0.004   PREDICTED: hypothetical protein 
LOC100129538          0.004   PREDICTED: hypothetical protein 
LOC100129538          0.004   PREDICTED: hypothetical protein 
PPOX                  0.004   protoporphyrinogen oxidase 
PPOX                  0.004   protoporphyrinogen oxidase 
EXO1                  0.004   exonuclease 1 isoform b 
EXO1                  0.004   exonuclease 1 isoform a 
EXO1                  0.004   exonuclease 1 isoform b 
TXNRD1                0.004   thioredoxin reductase 1 isoform 3 
TXNRD1                0.004   thioredoxin reductase 1 isoform 1 
TXNRD1                0.003   thioredoxin reductase 1 isoform 2 
TXNRD1                0.003   thioredoxin reductase 1 isoform 2 
TXNRD1                0.003   thioredoxin reductase 1 isoform 2 
ZNF181                0.003   zinc finger protein 181 isoform 2 
ZNF181                0.003   zinc finger protein 181 isoform 1 
RARS2                 0.003   arginyl-tRNA synthetase 2, mitochondrial precursor ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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