Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 133893286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|133893286 acidic chitinase isoform c [Homo sapiens]
(476 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|133893286 acidic chitinase isoform c [Homo sapiens] 1006 0.0
gi|42542398 acidic chitinase isoform a [Homo sapiens] 781 0.0
gi|4502809 chitotriosidase [Homo sapiens] 519 e-147
gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens] 389 e-108
gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens] 389 e-108
gi|144226251 chitinase 3-like 1 [Homo sapiens] 387 e-107
gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens] 380 e-105
gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens] 311 8e-85
gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens] 65 1e-10
gi|67782356 corneodesmosin precursor [Homo sapiens] 39 0.013
gi|122937309 leucine rich repeat containing 4B [Homo sapiens] 36 0.087
gi|4503493 early growth response 1 [Homo sapiens] 35 0.15
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 34 0.25
gi|55750053 atrophin-1 [Homo sapiens] 33 0.57
gi|55750041 atrophin-1 [Homo sapiens] 33 0.57
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 33 0.57
gi|38788260 bromodomain PHD finger transcription factor isoform ... 33 0.74
gi|38788274 bromodomain PHD finger transcription factor isoform ... 33 0.74
gi|45827771 autoantigen RCD8 [Homo sapiens] 33 0.74
gi|46358366 zinc finger protein 746 [Homo sapiens] 33 0.74
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 32 0.97
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 32 1.3
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 32 1.3
gi|149363700 syntaxin binding protein 5-like [Homo sapiens] 32 1.3
gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens] 32 1.6
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 32 1.6
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 32 1.6
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 32 1.6
gi|116235480 leucine zipper transcription regulator 2 [Homo sapi... 31 2.2
>gi|133893286 acidic chitinase isoform c [Homo sapiens]
Length = 476
Score = 1006 bits (2601), Expect = 0.0
Identities = 476/476 (100%), Positives = 476/476 (100%)
Query: 1 MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG 60
MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG
Sbjct: 1 MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG 60
Query: 61 RQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFI 120
RQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFI
Sbjct: 61 RQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFI 120
Query: 121 TSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMV 180
TSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMV
Sbjct: 121 TSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMV 180
Query: 181 TAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAY 240
TAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAY
Sbjct: 181 TAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAY 240
Query: 241 LNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGI 300
LNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGI
Sbjct: 241 LNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGI 300
Query: 301 WAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVW 360
WAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVW
Sbjct: 301 WAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVW 360
Query: 361 AIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSS 420
AIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSS
Sbjct: 361 AIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSS 420
Query: 421 GGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNWA 476
GGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNWA
Sbjct: 421 GGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNWA 476
>gi|42542398 acidic chitinase isoform a [Homo sapiens]
Length = 368
Score = 781 bits (2018), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 109 MVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQ 168
MVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQ
Sbjct: 1 MVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQ 60
Query: 169 EAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPL 228
EAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPL
Sbjct: 61 EAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPL 120
Query: 229 YKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGA 288
YKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGA
Sbjct: 121 YKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGA 180
Query: 289 GPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQW 348
GPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQW
Sbjct: 181 GPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQW 240
Query: 349 LKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAP 408
LKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAP
Sbjct: 241 LKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAP 300
Query: 409 SGSGNGSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT 468
SGSGNGSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT
Sbjct: 301 SGSGNGSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT 360
Query: 469 SCDCCNWA 476
SCDCCNWA
Sbjct: 361 SCDCCNWA 368
>gi|4502809 chitotriosidase [Homo sapiens]
Length = 466
Score = 519 bits (1336), Expect = e-147
Identities = 246/482 (51%), Positives = 322/482 (66%), Gaps = 24/482 (4%)
Query: 1 MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG 60
M + + G +++L + GSA +L CYFTNWAQYR G RF+P ++DP LCTHLIYAFAG
Sbjct: 1 MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAG 60
Query: 61 RQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFI 120
N++++T EWND TLYQ FNGLK N +LKTLLAIGGWNFGT FT MV+T NRQTF+
Sbjct: 61 MTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFV 120
Query: 121 TSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMV 180
S I+FLR+Y FDGLD DWEYPGS+GSP DK FT LVQ++ AF+QEA+ K RL++
Sbjct: 121 NSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL 180
Query: 181 TAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAY 240
+AAV AG + + +GYE+ +++Q LD++++M YD HGSWE TG NSPLYK ++G+ A
Sbjct: 181 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAAS 240
Query: 241 LNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGI 300
LNVD + W G PA KLI+G PTYG +F L++ S+T +GAP +G+G GP+ KE G+
Sbjct: 241 LNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGM 300
Query: 301 WAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVW 360
AYYE+C++ GAT+ Q+VPY ++ N WVG+D+++SF K +LK GGAMVW
Sbjct: 301 LAYYEVCSW--KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVW 358
Query: 361 AIDLDDFTGTFCNQGKFPLISTLKKAL-------GLQSASCTAPAQPIEPITAAPSGSGN 413
A+DLDDF G CNQG++PLI TL++ L G P QP EP
Sbjct: 359 ALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEP---------- 408
Query: 414 GSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCC 473
G S G FC +A+GLYP R++F+ C G +QQ+C GLVF SC CC
Sbjct: 409 -----EHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCC 463
Query: 474 NW 475
W
Sbjct: 464 TW 465
>gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]
Length = 390
Score = 389 bits (998), Expect = e-108
Identities = 192/390 (49%), Positives = 269/390 (68%), Gaps = 9/390 (2%)
Query: 1 MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG 60
M + L G+V++L LQ GSAY+L CYFTNW+Q R G+F P+NIDP LC+HLIY+FA
Sbjct: 6 MDQKSLWAGVVVLLLLQGGSAYKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFAS 65
Query: 61 RQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFI 120
+NN++ + ++V LYQ N LK KN +LK LL+IGG+ FG+ F MV + +R FI
Sbjct: 66 IENNKVIIKDKSEVMLYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFI 125
Query: 121 TSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMV 180
S+I FLR + FDGLD W YP + ++ H FTVL+ E+ EAF+++ + K RL++
Sbjct: 126 NSIILFLRNHNFDGLDVSWIYPDQK----ENTH-FTVLIHELAEAFQKDFTKSTKERLLL 180
Query: 181 TAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEG--YTGENSPLYKYPTDTGSN 238
TA V+AG I + Y++ +L++ LD+I+++++D HGSWE TG NSPL K D G +
Sbjct: 181 TAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPS 240
Query: 239 AYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKES 298
+Y NV+Y + YW G P+EK+++G PTYGH+F L++ + T +GAP SG G AGP + S
Sbjct: 241 SYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLAS-AETTVGAPASGPGAAGPITESS 299
Query: 299 GIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAM 358
G AYYEIC FLK GA Q+VPYA +GN WVGYD++KS + K Q+LK+ GGAM
Sbjct: 300 GFLAYYEICQFLK-GAKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAM 358
Query: 359 VWAIDLDDFTGTFCNQGKFPLISTLKKALG 388
+W+ID+DDFTG CNQG +PL+ +K++LG
Sbjct: 359 IWSIDMDDFTGKSCNQGPYPLVQAVKRSLG 388
>gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]
Length = 678
Score = 389 bits (998), Expect = e-108
Identities = 198/400 (49%), Positives = 257/400 (64%), Gaps = 7/400 (1%)
Query: 1 MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG 60
M KL+L GLVL+L G+A++L CYFTNWA RPG +P ++DP LCTHLI+AFA
Sbjct: 1 MWKLLLWVGLVLVLKHHDGAAHKLVCYFTNWAHSRPGPASILPHDLDPFLCTHLIFAFAS 60
Query: 61 RQNNEITTIEWNDVT-LYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTF 119
NN+I + D LY FN LK +N +LKTLL+IGGWNFGT+ FT M+ST NR+ F
Sbjct: 61 MNNNQIVAKDLQDEKILYPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKF 120
Query: 120 ITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLM 179
I SVI LR ++FDGLD + YPG RGSP D+ F L++E+ AF +EA +PRL+
Sbjct: 121 IASVISLLRTHDFDGLDLFFLYPGLRGSPMHDRWTFLFLIEELLFAFRKEALLTMRPRLL 180
Query: 180 VTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNA 239
++AAV+ +Q+ Y++ L + LD+I+V++YDLHGSWE +TG NSPL+ P D S+A
Sbjct: 181 LSAAVSGVPHIVQTSYDVRFLGRLLDFINVLSYDLHGSWERFTGHNSPLFSLPEDPKSSA 240
Query: 240 YLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESG 299
Y MNYW+ GAP+EKLI+G PTYG F L S G+ A G G Y K+ G
Sbjct: 241 -----YAMNYWRKLGAPSEKLIMGIPTYGRTFRLLKASKNGLQARAIGPASPGKYTKQEG 295
Query: 300 IWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMV 359
AY+EIC+F+ GA + W Q VPYA +G WVGYDN SF KA +++ FGGAMV
Sbjct: 296 FLAYFEICSFVW-GAKKHWIDYQYVPYANKGKEWVGYDNAISFSYKAWFIRREHFGGAMV 354
Query: 360 WAIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQ 399
W +D+DD GTFC G FPL+ L L S T+ Q
Sbjct: 355 WTLDMDDVRGTFCGTGPFPLVYVLNDILVRAEFSSTSLPQ 394
>gi|144226251 chitinase 3-like 1 [Homo sapiens]
Length = 383
Score = 387 bits (994), Expect = e-107
Identities = 195/381 (51%), Positives = 260/381 (68%), Gaps = 9/381 (2%)
Query: 8 TGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQNNEIT 67
TG V+++ LQ SAY+L CY+T+W+QYR G G PD +D LCTH+IY+FA N+ I
Sbjct: 8 TGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHID 67
Query: 68 TIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFL 127
T EWNDVTLY N LKN+N LKTLL++GGWNFG+ F+ + S ++R+TFI SV FL
Sbjct: 68 TWEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFL 127
Query: 128 RQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAG 187
R + FDGLD W YPG R DK FT L++EM+ F +EA Q K +L+++AA++AG
Sbjct: 128 RTHGFDGLDLAWLYPGRR-----DKQHFTTLIKEMKAEFIKEA-QPGKKQLLLSAALSAG 181
Query: 188 ISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVM 247
I S Y+I ++SQ+LD+I +MTYD HG+W G TG +SPL++ D + + N DY +
Sbjct: 182 KVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAV 241
Query: 248 NYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEIC 307
Y GAPA KL++G PT+G +F L++ S TG+GAP SG G G + KE+G AYYEIC
Sbjct: 242 GYMLRLGAPASKLVMGIPTFGRSFTLAS-SETGVGAPISGPGIPGRFTKEAGTLAYYEIC 300
Query: 308 TFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDF 367
FL+ GAT Q+VPYA +GN WVGYD+ +S K Q+LK + GAMVWA+DLDDF
Sbjct: 301 DFLR-GATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDF 359
Query: 368 TGTFCNQG-KFPLISTLKKAL 387
G+FC Q +FPL + +K AL
Sbjct: 360 QGSFCGQDLRFPLTNAIKDAL 380
>gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]
Length = 380
Score = 380 bits (977), Expect = e-105
Identities = 186/376 (49%), Positives = 260/376 (69%), Gaps = 9/376 (2%)
Query: 15 NLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQNNEITTIEWNDV 74
+L GSAY+L CYFTNW+Q R G+F P+NIDP LC+HLIY+FA +NN++ + ++V
Sbjct: 10 SLWAGSAYKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEV 69
Query: 75 TLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDG 134
LYQ N LK KN +LK LL+IGG+ FG+ F MV + +R FI S+I FLR + FDG
Sbjct: 70 MLYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDG 129
Query: 135 LDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSG 194
LD W YP + ++ H FTVL+ E+ EAF+++ + K RL++TA V+AG I +
Sbjct: 130 LDVSWIYPDQK----ENTH-FTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNS 184
Query: 195 YEIPQLSQYLDYIHVMTYDLHGSWEG--YTGENSPLYKYPTDTGSNAYLNVDYVMNYWKD 252
Y++ +L++ LD+I+++++D HGSWE TG NSPL K D G ++Y NV+Y + YW
Sbjct: 185 YQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIH 244
Query: 253 NGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN 312
G P+EK+++G PTYGH+F L++ + T +GAP SG G AGP + SG AYYEIC FLK
Sbjct: 245 KGMPSEKVVMGIPTYGHSFTLAS-AETTVGAPASGPGAAGPITESSGFLAYYEICQFLK- 302
Query: 313 GATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFC 372
GA Q+VPYA +GN WVGYD++KS + K Q+LK+ GGAM+W+ID+DDFTG C
Sbjct: 303 GAKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSC 362
Query: 373 NQGKFPLISTLKKALG 388
NQG +PL+ +K++LG
Sbjct: 363 NQGPYPLVQAVKRSLG 378
>gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]
Length = 311
Score = 311 bits (797), Expect = 8e-85
Identities = 154/315 (48%), Positives = 214/315 (67%), Gaps = 9/315 (2%)
Query: 76 LYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGL 135
LYQ N LK KN +LK LL+IGG+ FG+ F MV + +R FI S+I FLR + FDGL
Sbjct: 2 LYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGL 61
Query: 136 DFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSGY 195
D W YP + ++ H FTVL+ E+ EAF+++ + K RL++TA V+AG I + Y
Sbjct: 62 DVSWIYPDQK----ENTH-FTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSY 116
Query: 196 EIPQLSQYLDYIHVMTYDLHGSWEG--YTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDN 253
++ +L++ LD+I+++++D HGSWE TG NSPL K D G ++Y NV+Y + YW
Sbjct: 117 QVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHK 176
Query: 254 GAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKNG 313
G P+EK+++G PTYGH+F L++ T +GAP SG G AGP + SG AYYEIC FLK G
Sbjct: 177 GMPSEKVVMGIPTYGHSFTLASAETT-VGAPASGPGAAGPITESSGFLAYYEICQFLK-G 234
Query: 314 ATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFCN 373
A Q+VPYA +GN WVGYD++KS + K Q+LK+ GGAM+W+ID+DDFTG CN
Sbjct: 235 AKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCN 294
Query: 374 QGKFPLISTLKKALG 388
QG +PL+ +K++LG
Sbjct: 295 QGPYPLVQAVKRSLG 309
>gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]
Length = 385
Score = 65.5 bits (158), Expect = 1e-10
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 33/269 (12%)
Query: 113 PENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQ 172
P R ++I + + DG++ D E + SP D T LV+E ++F +E +
Sbjct: 116 PAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDA--LTALVKETTDSFHREIEG 173
Query: 173 INKPRLMVTAAVAAGISNIQSG-YEIPQLSQYLDYIHVMTYDLHGS-W-EGYTGENSPLY 229
VT VA NI Y ++ D++ VM+YD W E N+P
Sbjct: 174 SQ-----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYN 228
Query: 230 KYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAG 289
+ T TG N Y+ + +KL++G P YG+++ N S +
Sbjct: 229 Q--TLTGYNDYIKMSI----------NPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPF 276
Query: 290 PAGPYAKESGIWAYYEICTFLKNGATQG--WDAPQEVPY-------AYQGNVWVGYDNIK 340
P + +G Y+ N + G WD Q PY + VW YDN +
Sbjct: 277 RGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVW--YDNPQ 334
Query: 341 SFDIKAQWLKHNKFGGAMVWAIDLDDFTG 369
S +KA ++++ + G +W + D++G
Sbjct: 335 SISLKATYIQNYRLRGIGMWNANCLDYSG 363
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 38.5 bits (88), Expect = 0.013
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 379 LISTLKKALGLQSASCTAPAQPIEPITAAPSGSGNGSG-SSSSGGSSGGSGFCAVRANG 436
L TL K++G S C P + P +G G+ SG SS SG SS GS + R++G
Sbjct: 27 LPGTLAKSIGTFSDPCKDPTRITSPNDPCLTGKGDSSGFSSYSGSSSSGSSISSARSSG 85
>gi|122937309 leucine rich repeat containing 4B [Homo sapiens]
Length = 713
Score = 35.8 bits (81), Expect = 0.087
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 388 GLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSG 428
G +AS T ++P+ A +GSG G G SGG GGSG
Sbjct: 443 GNTTASATLNVSAVDPVAAGGTGSG-GGGPGGSGGVGGGSG 482
>gi|4503493 early growth response 1 [Homo sapiens]
Length = 543
Score = 35.0 bits (79), Expect = 0.15
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 375 GKFPLISTLKKALGLQSASCTAPAQP-IEPITAAPSGSGNGSGSSSSGGSSGGSG 428
G FP T+ L+ + P AP GSG+ S SSSSGG GG G
Sbjct: 21 GSFPHSPTMDNYPKLEEMMLLSNGAPQFLGAAGAPEGSGSNSSSSSSGGGGGGGG 75
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 34.3 bits (77), Expect = 0.25
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 391 SASCTAPAQPIEPITAAPSGS-----GNGSGSSSSGGSSGGSG 428
SA T PA P P + SGS G+GS SS GG S G+G
Sbjct: 106 SAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAG 148
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.1 bits (74), Expect = 0.57
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 389 LQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSGFCAVRANGLYP 439
L AS +APA P+ ++ S S + SSSS SS S F A +A YP
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYP 409
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.1 bits (74), Expect = 0.57
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 389 LQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSGFCAVRANGLYP 439
L AS +APA P+ ++ S S + SSSS SS S F A +A YP
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYP 409
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 33.1 bits (74), Expect = 0.57
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 400 PIEPITAAPSGSGNGSGSSSSGGSSGGSG 428
PI P ++PS S N G GG GG G
Sbjct: 39 PIAPSASSPSSSSNAGGGGGGGGGGGGGG 67
Score = 29.3 bits (64), Expect = 8.2
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 13/61 (21%)
Query: 386 ALGLQSASCTAPAQPI--EPITAAPSGSGNGSGS-----------SSSGGSSGGSGFCAV 432
AL S +AP P P +++ +G G G G SSS GSSGG G A+
Sbjct: 28 ALHSTSPGSSAPIAPSASSPSSSSNAGGGGGGGGGGGGGGGRSSSSSSSGSSGGGGSEAM 87
Query: 433 R 433
R
Sbjct: 88 R 88
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 32.7 bits (73), Expect = 0.74
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 388 GLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 426
G S P P P T+AP G G G +GG GG
Sbjct: 70 GSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGG 108
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 32.7 bits (73), Expect = 0.74
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 388 GLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGG 426
G S P P P T+AP G G G +GG GG
Sbjct: 70 GSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGG 108
>gi|45827771 autoantigen RCD8 [Homo sapiens]
Length = 1401
Score = 32.7 bits (73), Expect = 0.74
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 397 PAQPIEPITAAPSGSGNGSGSSSSGGSS 424
P+ ++ ITA+PS S +GS SSSS SS
Sbjct: 601 PSASLQQITASPSSSSSGSSSSSSSSSS 628
>gi|46358366 zinc finger protein 746 [Homo sapiens]
Length = 644
Score = 32.7 bits (73), Expect = 0.74
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 9/46 (19%)
Query: 383 LKKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSG 428
L+ +L SC AP SG G G G S SGG GGSG
Sbjct: 464 LQVSLSAHQRSCGAPDG---------SGPGTGGGGSGSGGGGGGSG 500
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 32.3 bits (72), Expect = 0.97
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 381 STLKKALGLQSASCTAPAQPIEPIT--------AAPSGSGNGSGSSSSGGSSGGSG 428
S L A +A+ A A + + A GSG GSGS GG +GG G
Sbjct: 451 SNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGG 506
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 388 GLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSG 428
G Q S +A A P P+ A S S +GS SS GG SG +G
Sbjct: 30 GGQRNSTSARAPPPPPL-APSSSSSSGSSGSSGGGGSGSAG 69
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 32.0 bits (71), Expect = 1.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 400 PIEPITAAPSGSGNGSGSSSSGGSSGGSGFCAVR 433
P + + P G G G GSS GG +GG A R
Sbjct: 10 PAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACR 43
>gi|149363700 syntaxin binding protein 5-like [Homo sapiens]
Length = 1186
Score = 32.0 bits (71), Expect = 1.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 401 IEPITAAPSGSGNGSGSSSSGGSSGGS 427
++ +TA+ GSG+ SGS+S GG+ GS
Sbjct: 10 LDGLTASSPGSGSSSGSNSGGGAGSGS 36
>gi|239582720 ATG9 autophagy related 9 homolog B [Homo sapiens]
Length = 924
Score = 31.6 bits (70), Expect = 1.6
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 386 ALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSGFCAVRANGLYP 439
A + S C++P+QP P PS S +GS +SS G+ +A L+P
Sbjct: 855 AASILSRPCSSPSQPPSPDEEKPSWSSDGSSPASSPRQQWGT----QKARNLFP 904
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 31.6 bits (70), Expect = 1.6
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 335 GYDNIKSFDIKA-QWLKHNKFGGAMVWAIDLDDFTGT--FCNQGKFPLISTLKKALGLQS 391
G +++ +K+ QWL+ K G A++L T FC + T+ + L
Sbjct: 6 GKESVSLLQMKSVQWLQ--KVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPSLGG 63
Query: 392 ASCTAPAQPIEPITAAPSGSGNGS-GSSSSG-GSSGGSGFCAVRANGLYPVANN 443
A + + +P G+G G+ G ++G G +GG G C R G +P A +
Sbjct: 64 GPAAGSAI-LRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGS 116
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 31.6 bits (70), Expect = 1.6
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 335 GYDNIKSFDIKA-QWLKHNKFGGAMVWAIDLDDFTGT--FCNQGKFPLISTLKKALGLQS 391
G +++ +K+ QWL+ K G A++L T FC + T+ + L
Sbjct: 6 GKESVSLLQMKSVQWLQ--KVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPSLGG 63
Query: 392 ASCTAPAQPIEPITAAPSGSGNGS-GSSSSG-GSSGGSGFCAVRANGLYPVANN 443
A + + +P G+G G+ G ++G G +GG G C R G +P A +
Sbjct: 64 GPAAGSAI-LRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGS 116
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 31.6 bits (70), Expect = 1.6
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 335 GYDNIKSFDIKA-QWLKHNKFGGAMVWAIDLDDFTGT--FCNQGKFPLISTLKKALGLQS 391
G +++ +K+ QWL+ K G A++L T FC + T+ + L
Sbjct: 6 GKESVSLLQMKSVQWLQ--KVGCLKKRAVNLWFLTSCTFFCRRAPLRAKRTVLSSPSLGG 63
Query: 392 ASCTAPAQPIEPITAAPSGSGNGS-GSSSSG-GSSGGSGFCAVRANGLYPVANN 443
A + + +P G+G G+ G ++G G +GG G C R G +P A +
Sbjct: 64 GPAAGSAI-LRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRGRGRFPCAGS 116
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapiens]
Length = 1343
Score = 31.6 bits (70), Expect = 1.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 397 PAQPIEPITAAPSGSGNGSGSSSSGGSSG 425
P I P APSG G GSG S GG G
Sbjct: 1035 PQITIGPQRPAPSGPGGGSGGGSGGGGGG 1063
Score = 30.0 bits (66), Expect = 4.8
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 403 PITAAPSGSGN--GSGSSSSGGSSGGSG 428
P+T P+GSG G GS GGS GGSG
Sbjct: 364 PVTL-PTGSGGSGGMGSGGGGGSGGGSG 390
>gi|116235480 leucine zipper transcription regulator 2 [Homo
sapiens]
Length = 1060
Score = 31.2 bits (69), Expect = 2.2
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 388 GLQSASCTAPAQPIEPITAAPS---GSGNGSGSSSSGGSSGGSG 428
GL + +P P P +A S G G G GS+SSGG++ G+G
Sbjct: 953 GLGLSLTPSPESPPLPDVSAFSRGRGGGEGRGSASSGGAAAGAG 996
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,151,718
Number of Sequences: 37866
Number of extensions: 998044
Number of successful extensions: 7401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6518
Number of HSP's gapped (non-prelim): 704
length of query: 476
length of database: 18,247,518
effective HSP length: 106
effective length of query: 370
effective length of database: 14,233,722
effective search space: 5266477140
effective search space used: 5266477140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.