Guide to the Human Genome
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Name: CHI3L2 Sequence: fasta or formatted (311aa) NCBI GI: 68533260
Description:

chitinase 3-like 2 isoform c

Referenced in:

Ovary, Uterus and Placenta

Other entries for this name:
alt prot [380aa] chitinase 3-like 2 isoform b
alt prot [390aa] chitinase 3-like 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         17           2
 C cysteine            0.6          2           1
 D aspartate           5.1         16           2
 E glutamate           4.2         13           1
 F phenylalanine       5.1         16           1
 G glycine             9.0         28           2
 H histidine           2.6          8           1
 I isoleucine          5.8         18           2
 K lysine              7.4         23           1
 L leucine            10.0         31           3
 M methionine          2.6          8           1
 N asparagine          4.5         14           1
 P proline             4.5         14           1
 Q glutamine           4.5         14           2
 R arginine            2.3          7           1
 S serine              9.0         28           2
 T threonine           5.5         17           2
 V valine              5.5         17           2
 W tryptophan          1.9          6           1
 Y tyrosine            4.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chitinase 3-like 2 isoform c 
CHI3L2                1.000   chitinase 3-like 2 isoform b 
CHI3L2                1.000   chitinase 3-like 2 isoform a 
CHIT1                 0.526   chitotriosidase 
CHI3L1                0.511   chitinase 3-like 1 
CHIA                  0.467   acidic chitinase isoform c 
CHIA                  0.413   acidic chitinase isoform a 
OVGP1                 0.389   oviductal glycoprotein 1 precursor 
CTBS                  0.047   chitobiase, di-N-acetyl- 
CHID1                 0.016   chitinase domain containing 1 isoform b 
CHID1                 0.016   chitinase domain containing 1 isoform a 
CHID1                 0.016   chitinase domain containing 1 isoform a 
CHID1                 0.016   chitinase domain containing 1 isoform a 
F5                    0.010   coagulation factor V precursor 
VSTM2A                0.007   V-set and transmembrane domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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