EDC4 30087

Name: EDC4	Sequence: fasta or formatted (1401aa)		NCBI GI: 45827771
Description: autoantigen RCD8		Referenced in: RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 132 3 C cysteine 1.8 25 2 D aspartate 5.0 70 2 E glutamate 6.6 92 3 F phenylalanine 2.4 33 1 G glycine 5.9 82 2 H histidine 2.9 40 1 I isoleucine 3.5 49 2 K lysine 3.8 53 2 L leucine 11.8 166 2 M methionine 1.8 25 1 N asparagine 1.9 27 2 P proline 6.8 95 2 Q glutamine 7.0 98 3 R arginine 5.1 71 2 S serine 11.6 162 11 T threonine 5.1 72 1 V valine 5.7 80 2 W tryptophan 1.0 14 1 Y tyrosine 1.1 15 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 autoantigen RCD8 SRRM2 0.012 splicing coactivator subunit SRm300 MAMLD1 0.011 mastermind-like domain containing 1 CROCC 0.010 ciliary rootlet coiled-coil HCN4 0.010 hyperpolarization activated cyclic nucleotide-gated p... LOC100133756 0.010 PREDICTED: hypothetical protein, partial BPTF 0.010 bromodomain PHD finger transcription factor isoform ... TNRC18 0.010 trinucleotide repeat containing 18 MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 NAV1 0.009 neuron navigator 1 BPTF 0.009 bromodomain PHD finger transcription factor isoform ... FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 LOC100133142 0.008 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.008 PREDICTED: similar to zinc finger protein 208 [Homo... MAP7D1 0.008 MAP7 domain containing 1 MUC16 0.008 mucin 16 MUC7 0.008 mucin 7, secreted precursor MUC7 0.008 mucin 7, secreted precursor MUC7 0.008 mucin 7, secreted precursor LRSAM1 0.008 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.008 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.008 leucine rich repeat and sterile alpha motif containi... CEP250 0.008 centrosomal protein 2 MICALL1 0.008 molecule interacting with Rab13 SETD1A 0.008 SET domain containing 1A FLJ22184 0.008 PREDICTED: hypothetical protein FLJ22184 MUC12 0.008 PREDICTED: mucin 12 LOC100131251 0.008 PREDICTED: hypothetical protein FLJ22184 0.008 PREDICTED: hypothetical protein LOC80164 LOC100131251 0.008 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.