Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OVGP1 Sequence: fasta or formatted (678aa) NCBI GI: 58386720
Description:

oviductal glycoprotein 1 precursor

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         41           2
 C cysteine            0.7          5           1
 D aspartate           3.4         23           2
 E glutamate           5.5         37           2
 F phenylalanine       5.0         34           2
 G glycine             7.5         51           2
 H histidine           3.2         22           2
 I isoleucine          3.8         26           1
 K lysine              5.0         34           2
 L leucine            10.2         69           3
 M methionine          2.8         19           2
 N asparagine          3.8         26           3
 P proline             6.5         44           2
 Q glutamine           2.9         20           1
 R arginine            4.9         33           2
 S serine              8.1         55           3
 T threonine           9.0         61           2
 V valine              6.8         46           1
 W tryptophan          2.1         14           1
 Y tyrosine            2.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oviductal glycoprotein 1 precursor 
CHIA                  0.268   acidic chitinase isoform c 
CHIT1                 0.248   chitotriosidase 
CHI3L2                0.233   chitinase 3-like 2 isoform a 
CHI3L2                0.226   chitinase 3-like 2 isoform b 
CHI3L1                0.223   chitinase 3-like 1 
CHIA                  0.180   acidic chitinase isoform a 
CHI3L2                0.175   chitinase 3-like 2 isoform c 
MUC5B                 0.022   mucin 5, subtype B, tracheobronchial 
ZAN                   0.021   zonadhesin isoform 3 
ZAN                   0.021   zonadhesin isoform 6 
MUC21                 0.018   mucin 21 
LOC100294420          0.017   PREDICTED: similar to mucin 2 
MUC5AC                0.016   mucin 5AC 
CTBS                  0.015   chitobiase, di-N-acetyl- 
MUC16                 0.015   mucin 16 
MUC2                  0.015   mucin 2 precursor 
MUC17                 0.015   mucin 17 
MUPCDH                0.014   mucin and cadherin-like isoform 1 
MUC3A                 0.013   PREDICTED: mucin 3A, intestinal 
LOC100294236          0.013   PREDICTED: similar to diffuse panbronchiolitis crit...
MUC12                 0.011   PREDICTED: mucin 12 
DPCR1                 0.011   diffuse panbronchiolitis critical region 1 protein ...
FAM65A                0.011   hypothetical protein LOC79567 
MUC12                 0.010   PREDICTED: mucin 12, cell surface associated 
LOC100131514          0.010   PREDICTED: similar to hCG1747327, partial 
MUC4                  0.010   mucin 4 isoform a 
BPTF                  0.010   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.010   bromodomain PHD finger transcription factor isoform ...
MUC12                 0.009   PREDICTED: mucin 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press