AFF3 34817

Name: AFF3	Sequence: fasta or formatted (1251aa)		NCBI GI: 68348716
Description: AF4/FMR2 family, member 3 isoform 2		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [1226aa] AF4/FMR2 family, member 3 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 104 3 C cysteine 1.6 20 1 D aspartate 5.0 63 2 E glutamate 7.0 88 3 F phenylalanine 1.8 23 2 G glycine 5.0 62 2 H histidine 2.4 30 1 I isoleucine 2.6 32 2 K lysine 7.0 88 2 L leucine 6.7 84 2 M methionine 1.8 23 1 N asparagine 5.0 63 2 P proline 8.2 103 3 Q glutamine 5.0 63 2 R arginine 5.5 69 2 S serine 14.7 184 8 T threonine 4.9 61 3 V valine 4.4 55 3 W tryptophan 1.0 12 1 Y tyrosine 1.9 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AF4/FMR2 family, member 3 isoform 2 AFF3 0.973 AF4/FMR2 family, member 3 isoform 1 AFF4 0.252 ALL1 fused gene from 5q31 AFF1 0.209 myeloid/lymphoid or mixed-lineage leukemia trithorax ... AFF2 0.170 fragile X mental retardation 2 DSPP 0.021 dentin sialophosphoprotein preproprotein TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform a ... NOLC1 0.018 nucleolar and coiled-body phosphoprotein 1 TNRC18 0.017 trinucleotide repeat containing 18 MLLT3 0.016 myeloid/lymphoid or mixed-lineage leukemia (trithor... TCOF1 0.016 Treacher Collins-Franceschetti syndrome 1 isoform d... NEFH 0.016 neurofilament, heavy polypeptide 200kDa TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform f... SETD1A 0.014 SET domain containing 1A TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform c ... TCOF1 0.014 Treacher Collins-Franceschetti syndrome 1 isoform b ... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.014 PREDICTED: similar to ribonucleic acid binding prote... SRRM2 0.014 splicing coactivator subunit SRm300 AP3B2 0.013 adaptor-related protein complex 3, beta 2 subunit [H... RNPS1 0.013 RNA-binding protein S1, serine-rich domain RNPS1 0.013 RNA-binding protein S1, serine-rich domain MAP4K4 0.012 mitogen-activated protein kinase kinase kinase kinas... MDC1 0.012 mediator of DNA-damage checkpoint 1 NCOR2 0.012 nuclear receptor co-repressor 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.