Guide to the Human Genome
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Name: MEF2A Sequence: fasta or formatted (429aa) NCBI GI: 195972805
Description:

myocyte enhancer factor 2A isoform 4

Referenced in:

Muscle
Additional Genes in Development

Other entries for this name:
alt prot [499aa] myocyte enhancer factor 2A isoform 1
alt prot [497aa] myocyte enhancer factor 2A isoform 2
alt prot [437aa] myocyte enhancer factor 2A isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         21           2
 C cysteine            0.2          1           1
 D aspartate           4.7         20           2
 E glutamate           2.3         10           1
 F phenylalanine       2.1          9           1
 G glycine             8.2         35           3
 H histidine           1.2          5           2
 I isoleucine          2.8         12           1
 K lysine              2.8         12           2
 L leucine             7.7         33           1
 M methionine          3.5         15           2
 N asparagine          5.4         23           1
 P proline            13.3         57           5
 Q glutamine           7.9         34          11
 R arginine            5.4         23           1
 S serine             14.7         63           6
 T threonine           6.3         27           2
 V valine              4.9         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.990   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.960   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.881   myocyte enhancer factor 2A isoform 1 
MEF2C                 0.391   myocyte enhancer factor 2C isoform 1 
MEF2C                 0.379   myocyte enhancer factor 2C isoform 2 
MEF2D                 0.368   myocyte enhancer factor 2D 
LOC100294395          0.341   PREDICTED: similar to serum response factor-related...
MUC5B                 0.038   mucin 5, subtype B, tracheobronchial 
ATN1                  0.036   atrophin-1 
ATN1                  0.036   atrophin-1 
TOB1                  0.036   transducer of ERBB2, 1 
SATB1                 0.034   special AT-rich sequence binding protein 1 
SATB1                 0.034   special AT-rich sequence binding protein 1 
MAML2                 0.034   mastermind-like 2 
CDX2                  0.032   caudal type homeobox 2 
HTT                   0.032   huntingtin 
SRCAP                 0.032   Snf2-related CBP activator protein 
EP400                 0.030   E1A binding protein p400 
SRRM2                 0.030   splicing coactivator subunit SRm300 
MED12                 0.030   mediator complex subunit 12 
MUC7                  0.030   mucin 7, secreted precursor 
MUC7                  0.030   mucin 7, secreted precursor 
MUC7                  0.030   mucin 7, secreted precursor 
EP300                 0.029   E1A binding protein p300 
LOC100133756          0.029   PREDICTED: hypothetical protein, partial 
MUC2                  0.029   mucin 2 precursor 
POLR2A                0.027   DNA-directed RNA polymerase II A 
TNRC6A                0.027   trinucleotide repeat containing 6A 
ZFHX3                 0.027   AT-binding transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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