Guide to the Human Genome
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Name: MEF2B Sequence: fasta or formatted (368aa) NCBI GI: 224809412
Description:

myocyte enhancer factor 2B isoform a

Referenced in:

Muscle
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         25           2
 C cysteine            1.1          4           1
 D aspartate           4.1         15           1
 E glutamate           5.4         20           2
 F phenylalanine       3.0         11           1
 G glycine            11.4         42           2
 H histidine           0.8          3           1
 I isoleucine          2.4          9           2
 K lysine              3.5         13           2
 L leucine            12.0         44           3
 M methionine          1.1          4           1
 N asparagine          1.6          6           1
 P proline            18.5         68           5
 Q glutamine           2.4          9           1
 R arginine            7.9         29           2
 S serine              7.9         29           2
 T threonine           4.6         17           1
 V valine              2.2          8           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myocyte enhancer factor 2B isoform a 
LOC729991-MEF2B       0.690   myocyte enhancer factor 2B isoform b 
MEF2C                 0.223   myocyte enhancer factor 2C isoform 1 
MEF2C                 0.213   myocyte enhancer factor 2C isoform 2 
MEF2A                 0.209   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.208   myocyte enhancer factor 2A isoform 1 
MEF2D                 0.208   myocyte enhancer factor 2D 
YLPM1                 0.066   YLP motif containing 1 
SF3B4                 0.062   splicing factor 3b, subunit 4 
RERE                  0.059   atrophin-1 like protein isoform b 
RERE                  0.059   atrophin-1 like protein isoform a 
RERE                  0.059   atrophin-1 like protein isoform a 
COL4A5                0.059   type IV collagen alpha 5 isoform 1 precursor 
PTPN23                0.058   protein tyrosine phosphatase, non-receptor type 23 [...
COL4A5                0.056   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.055   type IV collagen alpha 5 isoform 3 precursor 
RAPH1                 0.055   Ras association and pleckstrin homology domains 1 is...
NACA                  0.055   nascent polypeptide-associated complex alpha subuni...
FMN2                  0.054   formin 2 
COL8A1                0.054   alpha 1 type VIII collagen precursor 
COL8A1                0.054   alpha 1 type VIII collagen precursor 
COL7A1                0.052   alpha 1 type VII collagen precursor 
COL8A2                0.052   collagen, type VIII, alpha 2 
WASF2                 0.052   WAS protein family, member 2 
SF3A2                 0.052   splicing factor 3a, subunit 2 
TAF4                  0.052   TBP-associated factor 4 
SYN1                  0.052   synapsin I isoform Ia 
SYN1                  0.052   synapsin I isoform Ib 
SSBP4                 0.051   single stranded DNA binding protein 4 isoform a [Hom...
CPSF6                 0.051   cleavage and polyadenylation specific factor 6, 68 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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