Guide to the Human Genome
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Name: MEF2A Sequence: fasta or formatted (437aa) NCBI GI: 195972803
Description:

myocyte enhancer factor 2A isoform 3

Referenced in:

Muscle
Additional Genes in Development

Other entries for this name:
alt prot [499aa] myocyte enhancer factor 2A isoform 1
alt prot [497aa] myocyte enhancer factor 2A isoform 2
alt prot [429aa] myocyte enhancer factor 2A isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         21           2
 C cysteine            0.2          1           1
 D aspartate           4.6         20           2
 E glutamate           3.4         15           4
 F phenylalanine       2.1          9           1
 G glycine             8.0         35           3
 H histidine           1.1          5           2
 I isoleucine          2.7         12           1
 K lysine              2.7         12           2
 L leucine             8.0         35           1
 M methionine          3.4         15           2
 N asparagine          5.3         23           1
 P proline            13.0         57           5
 Q glutamine           7.8         34          11
 R arginine            5.3         23           1
 S serine             14.6         64           6
 T threonine           6.2         27           2
 V valine              4.8         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.974   myocyte enhancer factor 2A isoform 4 
MEF2A                 0.935   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.859   myocyte enhancer factor 2A isoform 1 
MEF2C                 0.396   myocyte enhancer factor 2C isoform 1 
MEF2D                 0.369   myocyte enhancer factor 2D 
MEF2C                 0.367   myocyte enhancer factor 2C isoform 2 
LOC100294395          0.339   PREDICTED: similar to serum response factor-related...
TOB1                  0.035   transducer of ERBB2, 1 
ATN1                  0.035   atrophin-1 
ATN1                  0.035   atrophin-1 
SATB1                 0.034   special AT-rich sequence binding protein 1 
SATB1                 0.034   special AT-rich sequence binding protein 1 
MUC5B                 0.034   mucin 5, subtype B, tracheobronchial 
SRRM2                 0.034   splicing coactivator subunit SRm300 
EP300                 0.033   E1A binding protein p300 
CDX2                  0.032   caudal type homeobox 2 
HTT                   0.032   huntingtin 
MAML3                 0.032   mastermind-like 3 
MAML2                 0.032   mastermind-like 2 
SRCAP                 0.030   Snf2-related CBP activator protein 
POLR2A                0.029   DNA-directed RNA polymerase II A 
EP400                 0.028   E1A binding protein p400 
TNRC6A                0.027   trinucleotide repeat containing 6A 
ABI1                  0.027   abl-interactor 1 isoform d 
ZFHX3                 0.027   AT-binding transcription factor 1 
BRD4                  0.027   bromodomain-containing protein 4 isoform long 
ABI1                  0.027   abl-interactor 1 isoform b 
MYST3                 0.027   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.027   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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