Guide to the Human Genome
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Name: MTA3 Sequence: fasta or formatted (515aa) NCBI GI: 50838795
Description:

metastasis associated 1 family, member 3

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         42           4
 C cysteine            2.1         11           1
 D aspartate           4.7         24           1
 E glutamate           7.4         38           3
 F phenylalanine       3.3         17           2
 G glycine             3.9         20           2
 H histidine           1.9         10           1
 I isoleucine          3.7         19           2
 K lysine              6.2         32           2
 L leucine             9.1         47           2
 M methionine          2.5         13           1
 N asparagine          3.7         19           1
 P proline             5.0         26           2
 Q glutamine           4.7         24           2
 R arginine            6.8         35           3
 S serine              8.9         46           3
 T threonine           5.8         30           2
 V valine              5.6         29           2
 W tryptophan          1.6          8           1
 Y tyrosine            4.9         25           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metastasis associated 1 family, member 3 
MTA1                  0.732   metastasis associated protein 
MTA2                  0.691   metastasis-associated protein 2 
RERE                  0.134   atrophin-1 like protein isoform a 
RERE                  0.134   atrophin-1 like protein isoform a 
RCOR1                 0.052   REST corepressor 1 
MIER2                 0.040   mesoderm induction early response 1, family member 2...
MIER3                 0.038   mesoderm induction early response 1, family member 3...
RCOR2                 0.038   REST corepressor 2 
MIER1                 0.038   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform i [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.038   mesoderm induction early response 1 isoform a [Homo...
RCOR3                 0.037   REST corepressor 3 isoform c 
RCOR3                 0.037   REST corepressor 3 isoform b 
RCOR3                 0.037   REST corepressor 3 isoform a 
RCOR3                 0.037   REST corepressor 3 isoform d 
TRERF1                0.026   transcriptional regulating factor 1 
ZNF541                0.018   zinc finger protein 541 
LOC441644             0.014   PREDICTED: similar to hCG2041217 
LOC441644             0.014   PREDICTED: similar to hCG2041217 
LOC441644             0.014   PREDICTED: similar to REST corepressor 2 
PBRM1                 0.011   polybromo 1 isoform 1 
PBRM1                 0.011   polybromo 1 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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