Guide to the Human Genome
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Name: MIER3 Sequence: fasta or formatted (549aa) NCBI GI: 94721313
Description:

mesoderm induction early response 1, family member 3

Referenced in:

Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         37           2
 C cysteine            2.0         11           2
 D aspartate           7.7         42           2
 E glutamate          11.5         63           4
 F phenylalanine       3.8         21           2
 G glycine             5.1         28           2
 H histidine           3.3         18           2
 I isoleucine          2.9         16           1
 K lysine              4.2         23           2
 L leucine             8.6         47           2
 M methionine          3.1         17           2
 N asparagine          5.6         31           2
 P proline             4.9         27           2
 Q glutamine           2.4         13           2
 R arginine            3.5         19           1
 S serine              9.1         50           3
 T threonine           6.6         36           1
 V valine              5.5         30           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.1         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1, family member 3... 
MIER1                 0.335   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.332   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.330   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.330   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.330   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.328   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.328   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.328   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.304   mesoderm induction early response 1 isoform h [Homo...
MIER2                 0.259   mesoderm induction early response 1, family member 2...
MIER1                 0.251   mesoderm induction early response 1 isoform i [Homo...
MTA2                  0.040   metastasis-associated protein 2 
TRERF1                0.037   transcriptional regulating factor 1 
RCOR3                 0.037   REST corepressor 3 isoform c 
RCOR3                 0.037   REST corepressor 3 isoform a 
ZNF541                0.036   zinc finger protein 541 
MTA3                  0.036   metastasis associated 1 family, member 3 
RCOR3                 0.036   REST corepressor 3 isoform b 
RCOR3                 0.034   REST corepressor 3 isoform d 
MTA1                  0.031   metastasis associated protein 
RCOR1                 0.029   REST corepressor 1 
C14orf43              0.027   hypothetical protein LOC91748 
C14orf43              0.027   hypothetical protein LOC91748 
NCOR2                 0.027   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.027   nuclear receptor co-repressor 2 isoform 1 
RERE                  0.027   atrophin-1 like protein isoform a 
RERE                  0.027   atrophin-1 like protein isoform a 
RCOR2                 0.025   REST corepressor 2 
NCOR1                 0.023   nuclear receptor co-repressor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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