Guide to the Human Genome
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Name: MTA1 Sequence: fasta or formatted (715aa) NCBI GI: 115527080
Description:

metastasis associated protein

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         58           4
 C cysteine            1.7         12           1
 D aspartate           4.3         31           2
 E glutamate           6.7         48           3
 F phenylalanine       2.1         15           3
 G glycine             5.3         38           2
 H histidine           2.2         16           1
 I isoleucine          4.2         30           2
 K lysine              6.4         46           2
 L leucine             9.2         66           3
 M methionine          2.4         17           1
 N asparagine          4.6         33           2
 P proline             7.6         54           4
 Q glutamine           3.9         28           2
 R arginine            7.8         56           3
 S serine              7.8         56           3
 T threonine           4.8         34           2
 V valine              5.2         37           2
 W tryptophan          1.4         10           1
 Y tyrosine            4.2         30           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metastasis associated protein 
MTA2                  0.537   metastasis-associated protein 2 
MTA3                  0.521   metastasis associated 1 family, member 3 
RERE                  0.091   atrophin-1 like protein isoform a 
RERE                  0.091   atrophin-1 like protein isoform a 
RCOR1                 0.029   REST corepressor 1 
MIER3                 0.024   mesoderm induction early response 1, family member 3...
MIER2                 0.023   mesoderm induction early response 1, family member 2...
RCOR3                 0.022   REST corepressor 3 isoform c 
RCOR3                 0.022   REST corepressor 3 isoform b 
RCOR3                 0.022   REST corepressor 3 isoform a 
RCOR3                 0.022   REST corepressor 3 isoform d 
MIER1                 0.021   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform i [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.021   mesoderm induction early response 1 isoform a [Homo...
RCOR2                 0.020   REST corepressor 2 
TRERF1                0.015   transcriptional regulating factor 1 
ZNF541                0.014   zinc finger protein 541 
C14orf43              0.010   hypothetical protein LOC91748 
C14orf43              0.010   hypothetical protein LOC91748 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 1 
MICALCL               0.007   MICAL C-terminal like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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