Guide to the Human Genome
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Name: MIER2 Sequence: fasta or formatted (545aa) NCBI GI: 45267839
Description:

mesoderm induction early response 1, family member 2

Referenced in:

Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         41           2
 C cysteine            2.6         14           1
 D aspartate           7.7         42           2
 E glutamate          10.5         57           5
 F phenylalanine       3.1         17           1
 G glycine             6.6         36           2
 H histidine           2.6         14           1
 I isoleucine          2.0         11           1
 K lysine              3.5         19           2
 L leucine             9.5         52           2
 M methionine          1.5          8           1
 N asparagine          3.1         17           1
 P proline             8.4         46           2
 Q glutamine           3.9         21           2
 R arginine            5.5         30           2
 S serine              9.4         51           2
 T threonine           3.7         20           2
 V valine              5.9         32           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.4         13           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1, family member 2... 
MIER3                 0.259   mesoderm induction early response 1, family member 3...
MIER1                 0.249   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.249   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.245   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.238   mesoderm induction early response 1 isoform i [Homo...
MTA3                  0.038   metastasis associated 1 family, member 3 
ZNF541                0.035   zinc finger protein 541 
RCOR1                 0.035   REST corepressor 1 
RCOR3                 0.034   REST corepressor 3 isoform c 
RCOR3                 0.034   REST corepressor 3 isoform a 
RCOR3                 0.033   REST corepressor 3 isoform b 
MTA1                  0.030   metastasis associated protein 
RERE                  0.030   atrophin-1 like protein isoform a 
RERE                  0.030   atrophin-1 like protein isoform a 
RCOR3                 0.028   REST corepressor 3 isoform d 
MTA2                  0.027   metastasis-associated protein 2 
NCOR2                 0.024   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.024   nuclear receptor co-repressor 2 isoform 1 
NCOR1                 0.022   nuclear receptor co-repressor 1 
TRERF1                0.022   transcriptional regulating factor 1 
C14orf43              0.021   hypothetical protein LOC91748 
C14orf43              0.021   hypothetical protein LOC91748 
RCOR2                 0.020   REST corepressor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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