Guide to the Human Genome
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Name: MIER1 Sequence: fasta or formatted (370aa) NCBI GI: 225735619
Description:

mesoderm induction early response 1 isoform i

Referenced in:

Mammary Tissues

Other entries for this name:
alt prot [512aa] mesoderm induction early response 1 isoform c
alt prot [433aa] mesoderm induction early response 1 isoform f
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [565aa] mesoderm induction early response 1 isoform b
alt prot [450aa] mesoderm induction early response 1 isoform d
alt prot [486aa] mesoderm induction early response 1 isoform e
alt prot [529aa] mesoderm induction early response 1 isoform a
alt prot [485aa] mesoderm induction early response 1 isoform h
alt prot [470aa] mesoderm induction early response 1 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         22           2
 C cysteine            1.6          6           1
 D aspartate           8.1         30           2
 E glutamate          14.6         54           9
 F phenylalanine       3.5         13           2
 G glycine             5.4         20           1
 H histidine           1.4          5           1
 I isoleucine          4.1         15           2
 K lysine              6.2         23           3
 L leucine             5.9         22           2
 M methionine          1.6          6           1
 N asparagine          5.4         20           1
 P proline             4.3         16           3
 Q glutamine           4.1         15           2
 R arginine            5.1         19           2
 S serine              9.7         36           2
 T threonine           3.2         12           1
 V valine              4.9         18           1
 W tryptophan          1.1          4           1
 Y tyrosine            3.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mesoderm induction early response 1 isoform i [Homo... 
MIER1                 1.000   mesoderm induction early response 1 isoform f [Homo...
MIER1                 1.000   mesoderm induction early response 1 isoform e [Homo...
MIER1                 1.000   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.984   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.944   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.944   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.944   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.944   mesoderm induction early response 1 isoform b [Homo...
MIER1                 0.944   mesoderm induction early response 1 isoform a [Homo...
MIER3                 0.376   mesoderm induction early response 1, family member 3...
MIER2                 0.357   mesoderm induction early response 1, family member 2...
MTA2                  0.056   metastasis-associated protein 2 
MTA3                  0.054   metastasis associated 1 family, member 3 
RERE                  0.045   atrophin-1 like protein isoform a 
RERE                  0.045   atrophin-1 like protein isoform a 
SETD1B                0.044   SET domain containing 1B 
MTA1                  0.041   metastasis associated protein 
NCOR2                 0.040   nuclear receptor co-repressor 2 isoform 2 
SETD1A                0.037   SET domain containing 1A 
ZNF541                0.037   zinc finger protein 541 
CENPB                 0.036   centromere protein B 
NCOR2                 0.036   nuclear receptor co-repressor 2 isoform 1 
UBTF                  0.036   upstream binding transcription factor, RNA polymera...
UBTF                  0.036   upstream binding transcription factor, RNA polymera...
UBTF                  0.036   upstream binding transcription factor, RNA polymerase...
RCOR3                 0.036   REST corepressor 3 isoform c 
RCOR3                 0.036   REST corepressor 3 isoform a 
BAZ2B                 0.036   bromodomain adjacent to zinc finger domain, 2B [Homo...
MYT1                  0.034   myelin transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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