Guide to the Human Genome
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Name: RCOR3 Sequence: fasta or formatted (436aa) NCBI GI: 209977082
Description:

REST corepressor 3 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {553aa} REST corepressor 3 isoform a
alt prot {449aa} REST corepressor 3 isoform c
alt prot {495aa} REST corepressor 3 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         33           2
 C cysteine            1.8          8           2
 D aspartate           5.7         25           3
 E glutamate           6.7         29           2
 F phenylalanine       2.3         10           1
 G glycine             7.6         33           4
 H histidine           3.7         16           2
 I isoleucine          3.4         15           2
 K lysine              6.9         30           2
 L leucine             5.5         24           2
 M methionine          2.8         12           2
 N asparagine          4.8         21           1
 P proline             6.9         30           2
 Q glutamine           4.8         21           2
 R arginine            4.1         18           2
 S serine             11.5         50           3
 T threonine           6.0         26           2
 V valine              3.7         16           2
 W tryptophan          1.1          5           1
 Y tyrosine            3.2         14           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   REST corepressor 3 isoform b 
RCOR3                 0.816   REST corepressor 3 isoform c 
RCOR3                 0.816   REST corepressor 3 isoform a 
RCOR3                 0.679   REST corepressor 3 isoform d 
RCOR1                 0.438   REST corepressor 1 
RCOR2                 0.411   REST corepressor 2 
LOC441644             0.111   PREDICTED: similar to hCG2041217 
LOC441644             0.111   PREDICTED: similar to hCG2041217 
LOC441644             0.111   PREDICTED: similar to REST corepressor 2 
ZNF541                0.046   zinc finger protein 541 
MTA2                  0.046   metastasis-associated protein 2 
TRERF1                0.045   transcriptional regulating factor 1 
MIER3                 0.045   mesoderm induction early response 1, family member 3...
MTA3                  0.043   metastasis associated 1 family, member 3 
MIER2                 0.041   mesoderm induction early response 1, family member 2...
MTA1                  0.037   metastasis associated protein 
NCOR2                 0.033   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.033   nuclear receptor co-repressor 2 isoform 1 
C14orf43              0.032   hypothetical protein LOC91748 
C14orf43              0.032   hypothetical protein LOC91748 
NCOR1                 0.030   nuclear receptor co-repressor 1 
MIER1                 0.029   mesoderm induction early response 1 isoform g [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform i [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform h [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform a [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform f [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform e [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform d [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform c [Homo...
MIER1                 0.029   mesoderm induction early response 1 isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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