RPGRIP1L 2143

Name: RPGRIP1L	Sequence: fasta or formatted (1315aa)		NCBI GI: 118442834
Description: RPGRIP1-like isoform a		Referenced in: Crystallins and Other Eye Proteins Planar Cell Polarity Ran and Rag
Other entries for this name: alt prot [1235aa] RPGRIP1-like isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 70 2 C cysteine 1.1 15 2 D aspartate 6.8 89 2 E glutamate 10.3 135 2 F phenylalanine 3.0 40 2 G glycine 3.9 51 3 H histidine 2.9 38 2 I isoleucine 6.0 79 2 K lysine 7.1 93 2 L leucine 10.2 134 3 M methionine 2.3 30 1 N asparagine 4.3 57 2 P proline 4.2 55 3 Q glutamine 7.1 93 2 R arginine 5.6 73 2 S serine 6.7 88 2 T threonine 4.9 65 2 V valine 5.2 69 2 W tryptophan 0.3 4 1 Y tyrosine 2.8 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RPGRIP1-like isoform a RPGRIP1L 0.918 RPGRIP1-like isoform b RPGRIP1 0.227 retinitis pigmentosa GTPase regulator interacting p... DSP 0.026 desmoplakin isoform I EEA1 0.026 early endosome antigen 1, 162kD CENPF 0.026 centromere protein F CCDC88C 0.024 DVL-binding protein DAPLE CCDC88A 0.024 coiled-coil domain containing 88A isoform 2 CCDC88A 0.024 coiled-coil domain containing 88A isoform 1 GOLGB1 0.024 golgi autoantigen, golgin subfamily b, macrogolgin ... LOC100133758 0.023 PREDICTED: hypothetical protein, partial ERC1 0.023 RAB6-interacting protein 2 isoform epsilon MYH8 0.022 myosin, heavy chain 8, skeletal muscle, perinatal [... ERC2 0.022 cytomatrix protein p110 MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CGNL1 0.021 cingulin-like 1 ERC1 0.021 RAB6-interacting protein 2 isoform delta MYH9 0.021 myosin, heavy polypeptide 9, non-muscle EVPL 0.021 envoplakin CEP250 0.021 centrosomal protein 2 ROCK1 0.021 Rho-associated, coiled-coil containing protein kinase... AKAP9 0.021 A-kinase anchor protein 9 isoform 2 MYH14 0.021 myosin, heavy chain 14 isoform 1 MYH14 0.021 myosin, heavy chain 14 isoform 2 MYH14 0.021 myosin, heavy chain 14 isoform 3 MYH10 0.021 myosin, heavy polypeptide 10, non-muscle GOLGA4 0.021 golgi autoantigen, golgin subfamily a, 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.