RBBP4 31517

Name: RBBP4	Sequence: fasta or formatted (425aa)		NCBI GI: 5032027
Description: retinoblastoma binding protein 4 isoform a		Referenced in: Histones, Related Proteins, and Modifying Enzymes RB1 and Related Functions WD Repeat Proteins
Other entries for this name: alt prot [424aa] retinoblastoma binding protein 4 isoform b alt prot [390aa] retinoblastoma binding protein 4 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 25 2 C cysteine 1.2 5 1 D aspartate 8.5 36 2 E glutamate 8.2 35 2 F phenylalanine 3.5 15 1 G glycine 5.9 25 2 H histidine 4.7 20 1 I isoleucine 5.4 23 2 K lysine 5.4 23 2 L leucine 7.8 33 2 M methionine 1.4 6 1 N asparagine 5.2 22 2 P proline 5.6 24 2 Q glutamine 3.1 13 1 R arginine 2.6 11 2 S serine 9.4 40 2 T threonine 4.9 21 1 V valine 6.4 27 2 W tryptophan 3.1 13 1 Y tyrosine 1.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoblastoma binding protein 4 isoform a RBBP4 0.993 retinoblastoma binding protein 4 isoform b RBBP4 0.918 retinoblastoma binding protein 4 isoform c RBBP7 0.897 retinoblastoma binding protein 7 LOC391556 0.172 PREDICTED: similar to hCG1643855 LOC391556 0.172 PREDICTED: hypothetical protein LOC391556 GRWD1 0.115 glutamate-rich WD repeat containing 1 TAF5L 0.078 PCAF associated factor 65 beta isoform a PEX7 0.073 peroxisomal biogenesis factor 7 TAF5 0.069 TBP-associated factor 5 WDR12 0.066 WD repeat domain 12 protein WDR33 0.064 WD repeat domain 33 isoform 1 WDR51A 0.060 WD repeat domain 51A isoform 3 WDR51A 0.060 WD repeat domain 51A isoform 2 WDR51A 0.060 WD repeat domain 51A isoform 1 NLE1 0.060 Notchless gene homolog isoform b NLE1 0.060 Notchless gene homolog isoform a TBL1X 0.059 transducin beta-like 1X isoform b TBL1X 0.059 transducin beta-like 1X isoform b TBL1X 0.059 transducin beta-like 1X isoform a TBL1X 0.059 transducin beta-like 1X isoform a CORO6 0.058 coronin 6 RFWD2 0.058 ring finger and WD repeat domain 2 isoform a RFWD2 0.058 ring finger and WD repeat domain 2 isoform d24 [Homo... WDR69 0.057 WD repeat domain 69 WDR59 0.054 WD repeat domain 59 CIAO1 0.054 WD repeat domain 39 WDR38 0.053 WD repeat domain 38 TBL1XR1 0.053 transducin (beta)-like 1 X-linked receptor 1 TSSC1 0.053 tumor suppressing subtransferable candidate 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.