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Search of human proteins with 4885373
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885373 histone cluster 1, H1a [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885373 histone cluster 1, H1a [Homo sapiens] 405 e-113
gi|4885379 histone cluster 1, H1e [Homo sapiens] 271 4e-73
gi|4885377 histone cluster 1, H1d [Homo sapiens] 255 2e-68
gi|4885381 histone cluster 1, H1b [Homo sapiens] 253 1e-67
gi|4885375 histone cluster 1, H1c [Homo sapiens] 245 2e-65
gi|20544168 histone cluster 1, H1t [Homo sapiens] 173 1e-43
gi|4885371 H1 histone family, member 0 [Homo sapiens] 112 2e-25
gi|5174449 H1 histone family, member X [Homo sapiens] 94 1e-19
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 67 9e-12
gi|32401437 H1 histone family, member N, testis-specific [Homo s... 65 3e-11
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s... 56 2e-08
gi|111548666 SNF2 histone linker PHD RING helicase isoform a [Ho... 55 4e-08
gi|27436873 SNF2 histone linker PHD RING helicase isoform b [Hom... 55 4e-08
gi|153791662 coiled-coil domain containing 71 [Homo sapiens] 51 6e-07
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 47 1e-05
gi|104526627 triadin [Homo sapiens] 47 1e-05
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 46 3e-05
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 45 5e-05
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 45 5e-05
gi|153070260 myristoylated alanine-rich protein kinase C substra... 45 6e-05
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 45 6e-05
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 45 6e-05
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 45 6e-05
gi|56676330 HP1-BP74 [Homo sapiens] 45 6e-05
gi|109637763 calpastatin isoform h [Homo sapiens] 44 1e-04
gi|109637757 calpastatin isoform e [Homo sapiens] 44 1e-04
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 43 2e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 42 3e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 42 3e-04
>gi|4885373 histone cluster 1, H1a [Homo sapiens]
Length = 215
Score = 405 bits (1042), Expect = e-113
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV
Sbjct: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK
Sbjct: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
Query: 121 PGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKV 180
PGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKV
Sbjct: 121 PGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKV 180
Query: 181 AKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
AKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK
Sbjct: 181 AKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
>gi|4885379 histone cluster 1, H1e [Homo sapiens]
Length = 219
Score = 271 bits (692), Expect = 4e-73
Identities = 155/222 (69%), Positives = 171/222 (77%), Gaps = 10/222 (4%)
Query: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
MSET P APAA A EK KKA+K +A A+K+K +GP VSELI +A ++SKER GV
Sbjct: 1 MSETAPAAPAAPAPAEKTPVKKKARK---SAGAAKRKASGPPVSELITKAVAASKERSGV 57
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
SLAALKKALAAAGYDVEKNNSRIKLG+KSLVSKGTLVQTKGTGASGSFKLNKKA+S E K
Sbjct: 58 SLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 117
Query: 121 PGASK--VATKTKATGASKKLKKATGAS---KKSVKTPKKAKKPAAT--RKSSKNPKKPK 173
P A K A K GA+KK KKATGA+ K + KTPKKAKKPAA K +K+PKK K
Sbjct: 118 PKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAAAAGAKKAKSPKKAK 177
Query: 174 TVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
KPKK KSPAKAKAVKPKAAK + KPK AKPKKAA KKK
Sbjct: 178 AAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKKAAAKKK 219
>gi|4885377 histone cluster 1, H1d [Homo sapiens]
Length = 221
Score = 255 bits (651), Expect = 2e-68
Identities = 151/223 (67%), Positives = 166/223 (74%), Gaps = 10/223 (4%)
Query: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
MSET P AP A EK KKAKK A A K+K +GP VSELI +A ++SKER GV
Sbjct: 1 MSETAPLAPTIPAPAEKTPVKKKAKKAG--ATAGKRKASGPPVSELITKAVAASKERSGV 58
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
SLAALKKALAAAGYDVEKNNSRIKLG+KSLVSKGTLVQTKGTGASGSFKLNKKA+S E K
Sbjct: 59 SLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEGK 118
Query: 121 PGASK--VATKTKATGASKKLKKATGAS--KKSV-KTPKKAKKP---AATRKSSKNPKKP 172
P A K A K GA+KK KK GA+ KKS+ KTPKK KKP A T+K +K+ KK
Sbjct: 119 PKAKKAGAAKPRKPAGAAKKPKKVAGAATPKKSIKKTPKKVKKPATAAGTKKVAKSAKKV 178
Query: 173 KTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
KT +PKK AKSPAKAKA KPKAAK + KPK K KKAAPKKK
Sbjct: 179 KTPQPKKAAKSPAKAKAPKPKAAKPKSGKPKVTKAKKAAPKKK 221
>gi|4885381 histone cluster 1, H1b [Homo sapiens]
Length = 226
Score = 253 bits (645), Expect = 1e-67
Identities = 147/220 (66%), Positives = 160/220 (72%), Gaps = 6/220 (2%)
Query: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
MSET P A A EK A KKA K A A A+K+K GP VSELI +A ++SKER G+
Sbjct: 1 MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGL 60
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
SLAALKKALAA GYDVEKNNSRIKLG+KSLVSKGTLVQTKGTGASGSFKLNKKA+S E K
Sbjct: 61 SLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 120
Query: 121 PGASK--VATKTKATGAS-KKLKKATGASKKSVKTPKKAKKPAA--TRKSSKNPKKPK-T 174
P A K A K GA+ KK KKA GA K KTPKKAKKPAA +K +K+PKK K
Sbjct: 121 PKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAA 180
Query: 175 VKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
KPKK KSPAK KAVKPKAAK + KPK AKPK A KK
Sbjct: 181 AKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKK 220
>gi|4885375 histone cluster 1, H1c [Homo sapiens]
Length = 213
Score = 245 bits (625), Expect = 2e-65
Identities = 149/223 (66%), Positives = 164/223 (73%), Gaps = 18/223 (8%)
Query: 1 MSETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
MSET P APAA+ EK KKA AK A + +K +GP VSELI +A ++SKER GV
Sbjct: 1 MSETAPAAPAAAPPAEKAPVKKKA---AKKAGGTPRKASGPPVSELITKAVAASKERSGV 57
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
SLAALKKALAAAGYDVEKNNSRIKLG+KSLVSKGTLVQTKGTGASGSFKLNKKA+S E K
Sbjct: 58 SLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAK 117
Query: 121 PGASKV-ATK-TKATGASKKLKKATGAS---KKSVKTPKKAKKPAA---TRKSSKNPKKP 172
P K TK K GA+KK KKA G + K + KTPKKAKKPAA T+K +K+PKK
Sbjct: 118 PKVKKAGGTKPKKPVGAAKKPKKAAGGATPKKSAKKTPKKAKKPAAATVTKKVAKSPKKA 177
Query: 173 KTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
K KPKK AKS AKAVKPKAA KPK KPKKAAPKKK
Sbjct: 178 KVAKPKKAAKS--AAKAVKPKAA-----KPKVVKPKKAAPKKK 213
>gi|20544168 histone cluster 1, H1t [Homo sapiens]
Length = 207
Score = 173 bits (438), Expect = 1e-43
Identities = 113/213 (53%), Positives = 140/213 (65%), Gaps = 10/213 (4%)
Query: 1 MSETVPPAPAAS--AAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERG 58
MSETVP A A++ AA EK K+ +KPA +AS+K P SVS+LI +A S S+ER
Sbjct: 1 MSETVPAASASAGVAAMEKLPTKKRGRKPAGLISASRKVP-NLSVSKLITEALSVSQERV 59
Query: 59 GVSLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVE 118
G+SL ALKKALAAAGYDVEKNNSRIKL +KSLV+KG LVQT+GTGASGSFKL+KK
Sbjct: 60 GMSLVALKKALAAAGYDVEKNNSRIKLSLKSLVNKGILVQTRGTGASGSFKLSKKVIPKS 119
Query: 119 TKPGASK-VATKTKATGASKKLKKATGASKKSVKTPKKAKKP-AATRKSSKNPKKPKTVK 176
T+ A K V+ KTK S+ K S K+ KT K+AKKP A T K+ ++ +K K K
Sbjct: 120 TRSKAKKSVSAKTKKLVLSRDSK-----SPKTAKTNKRAKKPRATTPKTVRSGRKAKGAK 174
Query: 177 PKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKK 209
K+ KSP KA+A K K + + A KK
Sbjct: 175 GKQQQKSPVKARASKSKLTQHHEVNVRKATSKK 207
>gi|4885371 H1 histone family, member 0 [Homo sapiens]
Length = 194
Score = 112 bits (281), Expect = 2e-25
Identities = 85/198 (42%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 24 AKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYDVEKNNSRI 83
A KP K A ASKK P S++IV A + K R G S +++K + + E +S+I
Sbjct: 10 AAKP-KRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQI 68
Query: 84 KLGIKSLVSKGTLVQTKGTGASGSFKL------NKKASSVETKPGASKVATKTKATGASK 137
KL IK LV+ G L QTKG GASGSF+L K + +TK KVAT KA+ K
Sbjct: 69 KLSIKRLVTTGVLKQTKGVGASGSFRLAKSDEPKKSVAFKKTKKEIKKVATPKKASKPKK 128
Query: 138 KLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKA 197
KA K+ K KK AAT K +K KPKTVK K V KA KPK KA
Sbjct: 129 AASKAPTKKPKATPVKKAKKKLAATPKKAK---KPKTVKAKPV-------KASKPK--KA 176
Query: 198 RVTKPKTAKPKKAAPKKK 215
+ KPK K A KKK
Sbjct: 177 KPVKPKAKSSAKRAGKKK 194
Score = 28.1 bits (61), Expect = 5.9
Identities = 22/65 (33%), Positives = 25/65 (38%)
Query: 7 PAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALK 66
P AAS AP K KK K AA+ KK P + AS K+ V A
Sbjct: 126 PKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKPKAKS 185
Query: 67 KALAA 71
A A
Sbjct: 186 SAKRA 190
>gi|5174449 H1 histone family, member X [Homo sapiens]
Length = 213
Score = 93.6 bits (231), Expect = 1e-19
Identities = 78/214 (36%), Positives = 104/214 (48%), Gaps = 10/214 (4%)
Query: 1 MSETVPPAPAASAAPEKPLAGKKAK-KPAKAAAASKKKPAGPSVSELIVQAASSSKERGG 59
+ E +P A A + AG A P+K SKKK S+L+V+ ER G
Sbjct: 5 LEEALPVTTAEGMAKKVTKAGGSAALSPSKKRKNSKKKNQPGKYSQLVVETIRRLGERNG 64
Query: 60 VSLAAL-KKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVE 118
SLA + +A +D + + +K IK+LV TL+Q KGTGA+GSFKLN+K
Sbjct: 65 SSLAKIYTEAKKVPWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANGSFKLNRKKLEGG 124
Query: 119 TKPGASKVATKTKATGASKKLKKATGA--SKKSVKTPKKAKKP-AATRKSSKNPKKPKTV 175
+ + A A A K K A GA S+++ K P + +KP + K KK K
Sbjct: 125 GERRGAPAAATAPAPTAHKAKKAAPGAAGSRRADKKPARGQKPEQRSHKKGAGAKKDKGG 184
Query: 176 KPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKK 209
K KK A A K VK KAAK V PK K +K
Sbjct: 185 KAKKTA--AAGGKKVK-KAAKPSV--PKVPKGRK 213
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 67.4 bits (163), Expect = 9e-12
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 3 ETVPPAPAASAAPEKPLAG---KKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGG 59
ET P +A+PEK ++AK PA+A + K++ P+ + +A S +KE
Sbjct: 500 ETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEA- 558
Query: 60 VSLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVET 119
K A + E+ S ++ + K + S + K E
Sbjct: 559 ------KSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEA 612
Query: 120 KPGA---SKVATKTKATGASKKLKKATGASKKSVKTPKKAKKP----AATRKSSKNPKKP 172
K A S V + K+ K +KA +K+ K+P+KAK P A + + +K+P K
Sbjct: 613 KSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKA 672
Query: 173 KTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
+ P+K AKSP KA+A P+ AK+ V + + K +P K+
Sbjct: 673 EAKSPEK-AKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKE 714
Score = 66.2 bits (160), Expect = 2e-11
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 7/218 (3%)
Query: 2 SETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVS 61
+E P + +P + + +KAK PAK A S + P E A S E+
Sbjct: 528 AEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSP 587
Query: 62 LAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKP 121
K+ A A EK S +K KS + V+ + + K +KA S +
Sbjct: 588 AKEEAKSPAEAK-SPEKAKSPVKEEAKSPAEAKSPVKEEAKSPA-EVKSPEKAKSPTKEE 645
Query: 122 GASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKP----AATRKSSKNPKKPKTVKP 177
S K+ +K +KA K K+P+KAK P A + + +K+P K + P
Sbjct: 646 AKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSP 705
Query: 178 KKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
+K AKSP K +A P+ AK+ V + K +P K+
Sbjct: 706 EK-AKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE 742
Score = 65.5 bits (158), Expect = 3e-11
Identities = 63/230 (27%), Positives = 93/230 (40%), Gaps = 18/230 (7%)
Query: 3 ETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSEL-IVQAASSSKERGGVS 61
E P A S E+ + +KAK P KA A S +K P +E + A S + S
Sbjct: 645 EAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKS 704
Query: 62 LAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKP 121
K + EK S +K K+ + V+ + + K +KA +++ K
Sbjct: 705 PEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKA-KSPEKAKTLDVKS 763
Query: 122 GASKVATKTKATGASKKL-KKATGASKKSVKTPKKAKKPA---ATRKSSKNPKKPKTVKP 177
+K K +A + K +KA K+ VK+P+KAK P A + PKK + P
Sbjct: 764 PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSP 823
Query: 178 KKVAKSPAKAKAVKPKAAKARVTKPKTAK------------PKKAAPKKK 215
K + P + K +P P T K PKK APK K
Sbjct: 824 VKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPK 873
Score = 52.8 bits (125), Expect = 2e-07
Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 18/214 (8%)
Query: 7 PAPAASAAPEKPLAGKK--AKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAA 64
P A + +PEK + K AK P KA + K++ P ++ V+ + + E+
Sbjct: 683 PVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKA------ 736
Query: 65 LKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSV---ETK- 120
K + EK S K + S K S + K +KA S E K
Sbjct: 737 -KSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKS 795
Query: 121 PGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKV 180
P +K K A K++ K K+ VK+P K ++ K + PKK + K
Sbjct: 796 PEKAKSPLKEDAKAPEKEIPK-----KEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPAT 850
Query: 181 AKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
K+ K + K +A K KPK + K+ A +K
Sbjct: 851 PKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEK 884
Score = 50.1 bits (118), Expect = 1e-06
Identities = 57/200 (28%), Positives = 74/200 (37%), Gaps = 12/200 (6%)
Query: 16 EKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYD 75
EKP K + P KA +K PA P E S KE A K
Sbjct: 828 EKPQEVKVKEPPKKAE--EEKAPATPKTEE----KKDSKKEEAPKKEAPKPKVEEKKEPA 881
Query: 76 VEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGA 135
VEK K V T A ++ + A E A K KA
Sbjct: 882 VEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEP 941
Query: 136 SKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAA 195
SK +K A +K +KAKKP K+ K+ K ++K P+K KA KA
Sbjct: 942 SKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKE----DDKTLSKEPSKPKA--EKAE 995
Query: 196 KARVTKPKTAKPKKAAPKKK 215
K+ T K +KP + A + K
Sbjct: 996 KSSSTDQKDSKPPEKATEDK 1015
Score = 47.4 bits (111), Expect = 9e-06
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 13/212 (6%)
Query: 3 ETVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSL 62
E P A S E+ +KAK P K A S +K P ++ + + +K
Sbjct: 715 EAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKT------ 768
Query: 63 AALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPG 122
A ++A + A EK S +K +KS + ++ A K K V++
Sbjct: 769 PAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKED---AKAPEKEIPKKEEVKSPVK 825
Query: 123 ASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAK 182
+ + K KK ++ + + K +KK A +K + PK + +P
Sbjct: 826 EEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKP 885
Query: 183 SPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
+K +A K +A K K P+K AP K
Sbjct: 886 KESKVEAKKEEAE----DKKKVPTPEKEAPAK 913
Score = 32.7 bits (73), Expect = 0.24
Identities = 24/129 (18%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 86 GIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGA 145
G+ + S T ++ K + ++K + + + T+ K+ K+ G
Sbjct: 425 GLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGK 484
Query: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA 205
++ + ++ + +K+P + P+K AKSP K +A P AK+ + +
Sbjct: 485 EEEG----GEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKS 540
Query: 206 KPKKAAPKK 214
+ +P+K
Sbjct: 541 PAEVKSPEK 549
>gi|32401437 H1 histone family, member N, testis-specific [Homo
sapiens]
Length = 255
Score = 65.5 bits (158), Expect = 3e-11
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 29/233 (12%)
Query: 6 PPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPS---------VSELIVQAASSSKE 56
P + A E P +++ + ++K GPS VS+L++QA S+ K
Sbjct: 14 PRRGGSGAMAEAPGPSGESRGHSATQLPAEKTVGGPSRGCSSSVLRVSQLVLQAISTHK- 72
Query: 57 RGGVSLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASS 116
G++LAALKK L AGY+V + + R + +K TL++ G+ A+G F++ K
Sbjct: 73 --GLTLAALKKELRNAGYEVRRKSGRHEAPRGQ--AKATLLRVSGSDAAGYFRV-WKVPK 127
Query: 117 VETKPGASKVATKTKA----TGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKP 172
KPG ++ T+A A + ++ +K+ + ++ + A K+ N +
Sbjct: 128 PRRKPGRARQEEGTRAPWRTPAAPRSSRRRRQPLRKAARKAREVWRRNARAKAKANARAR 187
Query: 173 KTVKPKKVAKSPAKAKAVKPKAAKA----------RVTKPKTAKPKKAAPKKK 215
+T + + AK P A+A + A A T P++ K K+ + K +
Sbjct: 188 RTRRARPRAKEPPCARAKEEAGATAADEGRGQAVKEDTTPRSGKDKRRSSKPR 240
>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
sapiens]
Length = 346
Score = 56.2 bits (134), Expect = 2e-08
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 16/212 (7%)
Query: 11 ASAAPEKPLAGKKAKKPAKAAAASKKKPAG---PSVSELIVQAASSSKERGGVSLAALKK 67
+S +PE G + P G P V ++++A + ++R G S+AA+K
Sbjct: 20 SSRSPESEKPGPSHGGVPPGGPSHSSLPVGRRHPPVLRMVLEALQAGEQRRGTSVAAIKL 79
Query: 68 ALAAA--GYDVEKNNSRIKLGIKSLVSKGTLVQ---TKGTGASGSFKL-NKKASSVETKP 121
+ DV + +K + + + +G L + +K GA+GSFKL K ++ +
Sbjct: 80 YILHKYPTVDVLRFKYLLKQALATGMRRGLLARPLNSKARGATGSFKLVPKHKKKIQPRK 139
Query: 122 GASKVATKTKATGASKKLKKATGASKKSV---KTPKKAKKPAATRKSSKNPKKPKTVKPK 178
A A + K KK + A + K K AK+PA K K P KP +
Sbjct: 140 MAPATAPRRAGEAKGKGPKKPSEAKEDPPNVGKVKKAAKRPA---KVQKPPPKPGAA-TE 195
Query: 179 KVAKSPAKAKAVKPKAAKARVTKPKTAKPKKA 210
K K AK + ++ +AR PK K +A
Sbjct: 196 KARKQGGAAKDTRAQSGEARKVPPKPDKAMRA 227
Score = 38.5 bits (88), Expect = 0.004
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 30/203 (14%)
Query: 7 PAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALK 66
P+ A P K AK+PAK +K P P A ++++GG A K
Sbjct: 160 PSEAKEDPPNVGKVKKAAKRPAKV----QKPPPKPGA------ATEKARKQGG----AAK 205
Query: 67 KALAAAGYDVEKNNSRIKLGIKSLVSKGTL---VQTKGTGAS---GSFKLNKKASSVETK 120
A +G + K + +++ S G L + KG+ +S KA S +K
Sbjct: 206 DTRAQSG-EARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAESKSSK 264
Query: 121 PGASKV------ATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKT 174
P ASKV TK K +K K G + K+ K + S+ + PK
Sbjct: 265 PTASKVKNGAASPTKKKVVAKAKAPKAGQGPNTKAAAPAKGSGSKVVPAHLSRKTEAPK- 323
Query: 175 VKPKKVAKSPAKAKAVKPKAAKA 197
P+K A P KA + K + +A
Sbjct: 324 -GPRK-AGLPIKASSSKVSSQRA 344
Score = 38.5 bits (88), Expect = 0.004
Identities = 57/209 (27%), Positives = 78/209 (37%), Gaps = 37/209 (17%)
Query: 12 SAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAA 71
S A E P K KK AK A +K P P A ++++GG A K A
Sbjct: 161 SEAKEDPPNVGKVKKAAKRPAKVQKPPPKPGA------ATEKARKQGG----AAKDTRAQ 210
Query: 72 AGYDVEKNNSRIKLGIKSLVSKGTL---VQTKGTGAS---GSFKLNKKASSVETKPGASK 125
+G + K + +++ S G L + KG+ +S KA S +KP ASK
Sbjct: 211 SG-EARKVPPKPDKAMRAPSSAGGLSRKAKAKGSRSSQGDAEAYRKTKAESKSSKPTASK 269
Query: 126 VATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPA 185
V GA+ KK K KAK P A + + P KV +
Sbjct: 270 VKN-----GAASPTKK---------KVVAKAKAPKAGQGPNTKAAAPAKGSGSKVVPAHL 315
Query: 186 KAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
K PK + K P KA+ K
Sbjct: 316 SRKTEAPKGPR------KAGLPIKASSSK 338
Score = 35.4 bits (80), Expect = 0.037
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 142 ATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPA-----KAKAVKP-KAA 195
ATG + + P +K AT PK K ++P+K+A + A +AK P K +
Sbjct: 102 ATGMRRGLLARPLNSKARGATGSFKLVPKHKKKIQPRKMAPATAPRRAGEAKGKGPKKPS 161
Query: 196 KARVTKPKTAKPKKAAPK 213
+A+ P K KKAA +
Sbjct: 162 EAKEDPPNVGKVKKAAKR 179
>gi|111548666 SNF2 histone linker PHD RING helicase isoform a [Homo
sapiens]
Length = 1687
Score = 55.1 bits (131), Expect = 4e-08
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 35 KKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAA-GYDVEKNNSRIKLGIKSLVSK 93
K+K P +I+ A + GVS+ ++ K +++ YDV++N S +K +K L+ +
Sbjct: 434 KEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFE 493
Query: 94 GTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTP 153
G + Q KG G SG+F L K + TK +A G+ +K++K T K K
Sbjct: 494 GLVKQIKGHGFSGTFTLGKNYKEEDICD-----KTKKQAVGSPRKIQKET--RKSGNKDT 546
Query: 154 KKAKKPAATRKSSKNP-------KKPKTVKPKKVAKSPAKAKA 189
P+ T +P ++ ++ KK+ S K K+
Sbjct: 547 DSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKS 589
>gi|27436873 SNF2 histone linker PHD RING helicase isoform b [Homo
sapiens]
Length = 1659
Score = 55.1 bits (131), Expect = 4e-08
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 35 KKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAA-GYDVEKNNSRIKLGIKSLVSK 93
K+K P +I+ A + GVS+ ++ K +++ YDV++N S +K +K L+ +
Sbjct: 434 KEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFE 493
Query: 94 GTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTP 153
G + Q KG G SG+F L K + TK +A G+ +K++K T K K
Sbjct: 494 GLVKQIKGHGFSGTFTLGKNYKEEDICD-----KTKKQAVGSPRKIQKET--RKSGNKDT 546
Query: 154 KKAKKPAATRKSSKNP-------KKPKTVKPKKVAKSPAKAKA 189
P+ T +P ++ ++ KK+ S K K+
Sbjct: 547 DSEYLPSDTSDDDDDPYYYYYKSRRNRSKLRKKLVPSTKKGKS 589
>gi|153791662 coiled-coil domain containing 71 [Homo sapiens]
Length = 467
Score = 51.2 bits (121), Expect = 6e-07
Identities = 47/136 (34%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 86 GIKSLVSKGTLV-QTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATG 144
G K L KG +G+G + SV G S + TKT ++ L KA
Sbjct: 235 GPKCLTRKGPGAGPRRGSGHQSKTNRATGSPSVRRMKGGSALGTKTAQAKVARTLAKAAR 294
Query: 145 ASKKSVKTPKKAKKPAATRKSSKNPKKPKT----VKPK-KV----AKSPAKAKAVKPKAA 195
A K +T KA K A K+++ K K VK K KV AK+ AKAKAV+ KA
Sbjct: 295 AQAKVARTQAKAAKARAKAKAAQVKAKAKAKAAQVKAKAKVMAAWAKAKAKAKAVRAKAK 354
Query: 196 KARVTKPKTAKPKKAA 211
AR +PK +A
Sbjct: 355 VARTQPRGRGRPKGSA 370
Score = 36.2 bits (82), Expect = 0.022
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 23/204 (11%)
Query: 16 EKPLAGKKA--KKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAG 73
+ PL +K+ K P + +K L + + RG + +A +
Sbjct: 207 DSPLKLRKSSGKGPGNPRPKAPRKTTSKGPKCLTRKGPGAGPRRGSGHQSKTNRATGSPS 266
Query: 74 YDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKAT 133
K S LG K+ +K K A +A T+ A+K K KA
Sbjct: 267 VRRMKGGSA--LGTKTAQAKVARTLAKAARA--------QAKVARTQAKAAKARAKAKAA 316
Query: 134 GASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPK-KVAKSPAKAKAVKP 192
K A K+ + KAK AA K+ K K V+ K KVA++ + +
Sbjct: 317 QVKAK------AKAKAAQVKAKAKVMAAWAKAK---AKAKAVRAKAKVARTQPRGRGRPK 367
Query: 193 KAAKARVT-KPKTAKPKKAAPKKK 215
+AKAR T K + +P+ K+K
Sbjct: 368 GSAKARTTRKGQKNRPETVGQKRK 391
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 146 SKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVK----PKAAKARVTK 201
++ S+ ++ KK K+ K+PK+PK K KK K P KA K PK KA+
Sbjct: 630 NRNSLDGSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTAT 689
Query: 202 PKTAKPKKAAPKK 214
PK KK++ KK
Sbjct: 690 PKPKSSKKSSNKK 702
Score = 46.2 bits (108), Expect = 2e-05
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 137 KKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSP--AKAKAVKPKA 194
KK KK + K+ K PK+ K+P K K PK+PKT K K+ K P KAK PK
Sbjct: 641 KKKKKRS----KAKKDPKEPKEP----KEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKP 692
Query: 195 AKARVTKPKTAKPKKAAPKKK 215
++ + K + +A KKK
Sbjct: 693 KSSKKSSNKKPDSEASALKKK 713
Score = 38.1 bits (87), Expect = 0.006
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 122 GASKVATKTKATGASKKLKKATGAS-KKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKV 180
G+ + K K + A K K+ KK K PK K P ++ + K T KPK
Sbjct: 636 GSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSS 695
Query: 181 AKSPAKAKAVKPKAAKARVTKPKT 204
KS K + A K +V K KT
Sbjct: 696 KKSSNKKPDSEASALKKKVNKGKT 719
Score = 33.9 bits (76), Expect = 0.11
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 103 GASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASK--KSVKTPKKAKKPA 160
G + +LN+ + + K +K K K K K K+ K PK K+P
Sbjct: 622 GGVDNQELNRNSLDGSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPK 681
Query: 161 ATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
+ + P KPK+ K K ++A A+K K K + + + K P
Sbjct: 682 EKKAKTATP-KPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPP 732
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 47.0 bits (110), Expect = 1e-05
Identities = 69/226 (30%), Positives = 90/226 (39%), Gaps = 29/226 (12%)
Query: 8 APAASAAPEKPLAGKKAKKPAKA-----------------AAASKKKPAGPSVSELIVQA 50
A AA+ EK KK KKPA+ A + KK+ + PS ++ +
Sbjct: 367 AQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKT 426
Query: 51 ASSSKERGGVSLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKL 110
+ +E G VS+ KKA+ G EK ++ I+ S T K +
Sbjct: 427 ERAKEEIGAVSI---KKAVP--GKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEE 481
Query: 111 NKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSK-NP 169
AS E +P K +KA G K K KK K + KK A S K
Sbjct: 482 KVPASLKEKEPETKKDEKMSKA-GKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQI 540
Query: 170 KKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
K VKP+K S K + K KA VT KTAKPK P KK
Sbjct: 541 HKQDIVKPEKTV-SHGKPEEKVLKQVKA-VTIEKTAKPK---PTKK 581
Score = 43.9 bits (102), Expect = 1e-04
Identities = 59/233 (25%), Positives = 84/233 (36%), Gaps = 29/233 (12%)
Query: 7 PAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVS---LA 63
P PA+ A EK KKA+K + K+K SE KE G S
Sbjct: 302 PTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKKEPGKASETKQG 361
Query: 64 ALKKALAAAGYDVEKNNSRIKLGIKSLVS--KGTLVQTKGTGASGSFKLNKKASSVETKP 121
+K A AA EK K + V KG + K + K KK SV +
Sbjct: 362 TVKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPA-KSPKKEHSVPSDK 420
Query: 122 GASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP------------ 169
+ K + +KKA KK KT K ++ KS K
Sbjct: 421 QVKAKTERAKEEIGAVSIKKAV-PGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGK 479
Query: 170 ----------KKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
K+P+T K +K++K+ + K P+ + KP+ K+A P
Sbjct: 480 EEKVPASLKEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKP 532
Score = 41.6 bits (96), Expect = 5e-04
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 109 KLNKKASSVETKPGASKVATKTK----ATGASKKLKKATGASKKSVKTPKKAKKPAATRK 164
K+ K + E + G KV K K AT K KK +K K KKAK A +
Sbjct: 157 KIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAK--TAEKS 214
Query: 165 SSKNPKKPKTVKPKKVAKSPAKAKAVK--PKAAKARVTKPKTAKPK 208
K K+ K K +KV ++ AK K V+ P K + K K A K
Sbjct: 215 EEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSK 260
Score = 37.0 bits (84), Expect = 0.013
Identities = 57/224 (25%), Positives = 77/224 (34%), Gaps = 78/224 (34%)
Query: 9 PAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKA 68
P S A PL ++A +P A+ A ++K +E V + + KE+ + KK+
Sbjct: 284 PGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIK----KKS 339
Query: 69 LAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVAT 128
DVEK K KAS ETK G K+A
Sbjct: 340 EKETAIDVEK------------------------------KEPGKAS--ETKQGTVKIA- 366
Query: 129 KTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAK 188
A A+KK K ++ SK KKP V+ K K K K
Sbjct: 367 -------------AQAAAKKDEK-----------KEDSKKTKKPAEVEQPKGKKQEKKEK 402
Query: 189 AVKP-------------KAAKARVTKPK----TAKPKKAAPKKK 215
V+P K KA+ + K KKA P KK
Sbjct: 403 HVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKK 446
Score = 34.3 bits (77), Expect = 0.082
Identities = 38/144 (26%), Positives = 52/144 (36%), Gaps = 41/144 (28%)
Query: 109 KLNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAK---------KP 159
K KKA+ E K TKT A K+ KKA A K KT K+ K
Sbjct: 179 KPEKKATHKEKIEKKEKPETKTLA----KEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTA 234
Query: 160 AATRKSSKNPKKPKTVKPKKVAK-------------------------SPAKAKAVKPKA 194
A ++ K P KPK + K+ A P ++ A+ P
Sbjct: 235 AKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPPPL 294
Query: 195 AKARVTKPKTAKP---KKAAPKKK 215
+ ++P A P +K KKK
Sbjct: 295 PTEQASRPTPASPALEEKEGEKKK 318
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 46.6 bits (109), Expect = 2e-05
Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKK 171
+K + K A K K K T KK KK KK KT K K T+K + KK
Sbjct: 11 EKVHVITEKESAWKRGRKKKTT---KKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKK 67
Query: 172 PKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
T K+ K K K + + K + + K K KK KKK
Sbjct: 68 TTTTTTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKK 111
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 45.8 bits (107), Expect = 3e-05
Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 25/207 (12%)
Query: 8 APAASAAPEKPLAGKKA---KKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAA 64
AP+ A K + K A K PA AA+ K+P G L +A SSS E
Sbjct: 376 APSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEE------- 428
Query: 65 LKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGAS 124
++ + EK + +K L GS + +SS +
Sbjct: 429 -----ESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGS----RDSSSDSDSSSSE 479
Query: 125 KVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSP 184
+ KT + KK +K G + S K K ++ SS + + + K SP
Sbjct: 480 EEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSP 539
Query: 185 AKAKAVKPKAAKARVTKPKTAKPKKAA 211
+P+A KA T TA+ KAA
Sbjct: 540 ------RPQAPKANGTSALTAQNGKAA 560
Score = 44.3 bits (103), Expect = 8e-05
Identities = 51/226 (22%), Positives = 85/226 (37%), Gaps = 15/226 (6%)
Query: 4 TVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLA 63
T PA +AAP++P+ G + KA ++S ++ + S E + +++K + A
Sbjct: 395 TKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAA 454
Query: 64 ALKKALAA--------AGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGAS--GSFKLNKK 113
A A + D + + KS V K G S S K K
Sbjct: 455 LSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKA 514
Query: 114 ASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPK 173
SS + S + K G +A A+ S T + K + + + KK
Sbjct: 515 ESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAA 574
Query: 174 TVKPK-----KVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
V K K ++ A +A P+A K ++ P T +K K+
Sbjct: 575 VVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTPNTFPKRKKGEKR 620
Score = 40.4 bits (93), Expect = 0.001
Identities = 45/219 (20%), Positives = 79/219 (36%), Gaps = 13/219 (5%)
Query: 6 PPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAAL 65
P + ++ E + ++ KKP A SK P + AA SS + +
Sbjct: 318 PVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKK----AAESSSDSSDSDSSED 373
Query: 66 KKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTG---------ASGSFKLNKKASS 116
+A + + ++++ + KS K + G A S + +SS
Sbjct: 374 DEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSS 433
Query: 117 VETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
E K TK KAT + A A + S + + ++ + K K K
Sbjct: 434 EEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKK 493
Query: 177 PKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
P+KVA A +K K KA + ++ ++K
Sbjct: 494 PQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEK 532
Score = 39.7 bits (91), Expect = 0.002
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 24 AKKPAKAAAASKKKPAGPSVSELI---VQAASSSKERGGVSLAALKKALAAAGYDVEKNN 80
A K AKA A+++ S+ ++ +++A + + + KKA A +++
Sbjct: 31 ANKFAKATGATQQDANASSLLDIYSFWLKSAKVPERKLQANGPVAKKAKKKASSSDSEDS 90
Query: 81 SRIKLGIKSLVSKGTLVQTKGTG---ASGSFKLNKKASSVETKPGASKVATKTKATGASK 137
S + ++ +K V K G + K ++ +SS E+ + K + K
Sbjct: 91 SEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPV--QK 148
Query: 138 KLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKA 197
+K A+K PKKAK + SS + PK KPK + P KA
Sbjct: 149 GVKPQAKAAKAP---PKKAKSSDSDSDSSSEDEPPKNQKPK-----------ITPVTVKA 194
Query: 198 RVTKPKTAKPKKAAPK 213
+ P KP +AAPK
Sbjct: 195 QTKAP--PKPARAAPK 208
Score = 35.0 bits (79), Expect = 0.048
Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 10/209 (4%)
Query: 11 ASAAPEKPLA--GKKAKKPAKAAAASKKKPAGPSVSEL----IVQAASSSKERGGVSLAA 64
++ PE+ L G AKK K A++S + + E+ +AA +K G A
Sbjct: 60 SAKVPERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKA 119
Query: 65 LKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGAS 124
KA ++ + ++ + K V KG Q K A + + S +
Sbjct: 120 AAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEP 179
Query: 125 KVATKTKATGASKKLKKATGASKKSVKT-PKKAK-KPAATRKSSKNPKKPKTVKPKKVAK 182
K K T + +K T A K + PK A K A++ SS + + +K A
Sbjct: 180 PKNQKPKITPVT--VKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAA 237
Query: 183 SPAKAKAVKPKAAKARVTKPKTAKPKKAA 211
+P K K AKA V T K ++
Sbjct: 238 TPKKTVPKKQVVAKAPVKAATTPTRKSSS 266
Score = 30.8 bits (68), Expect = 0.91
Identities = 45/219 (20%), Positives = 79/219 (36%), Gaps = 32/219 (14%)
Query: 23 KAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYDVEKNNSR 82
+ K P K A A+ K G + S ++SSS + + +KA A V K
Sbjct: 195 QTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDD-----SEEEKAAATPKKTVPKKQVV 249
Query: 83 IKLGIKSLVSKGTLVQTKGTGASGSFKLNKKA--------------------SSVETKPG 122
K +K+ + + +S + KK S+ T+P
Sbjct: 250 AKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPP 309
Query: 123 ASKVATKTKATGASKKLKKATGASKKSVKTPKKA------KKPAATRKSSKNPKKPKTVK 176
V + + ++ +S++ K P KA KP +K++++
Sbjct: 310 KKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSD 369
Query: 177 PKKVAKSPAK-AKAVKPKAAKARVTKPKTAKPKKAAPKK 214
+ ++P+K A K + K VT A AAPK+
Sbjct: 370 SSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQ 408
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 45.1 bits (105), Expect = 5e-05
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 6 PPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPA----GPSVSELI-VQAASSSKERGGV 60
P AP P G+ K+ A S+K+PA G VS + ++A SK + G
Sbjct: 328 PGAPGEGPEARGPSLGEDTKE-ADLPEPSEKQPAAAPRGKPVSRVPQLKARMVSKSKDGT 386
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETK 120
G D +K + + K+L ++ L T S + + +V +
Sbjct: 387 ------------GSDDKKAKTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSSPAVCPE 434
Query: 121 PGAS-----KVATKTKATGASK-KLKKATGASKKSVKTPKKAKKPA------ATRKSSKN 168
P +S V ++T ++GA + KLK A G +K + TP+ A P ATR +K
Sbjct: 435 PPSSPKHVSSVTSRTGSSGAKEMKLKGADGKTK--IATPRGAAPPGQKGQANATRIPAKT 492
Query: 169 PKKPKTV----KPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
P PKT +P K + P +R P P PKK
Sbjct: 493 PPAPKTPPSSGEPPKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPTREPKK 542
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 45.1 bits (105), Expect = 5e-05
Identities = 54/219 (24%), Positives = 84/219 (38%), Gaps = 42/219 (19%)
Query: 4 TVPPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLA 63
T PPAP + +AP P+ K+ K+ AAA P V E Q +++E
Sbjct: 807 TPPPAPPSPSAPP-PVVPKEEKEEETAAA--------PPVEEGEEQKPPAAEE------- 850
Query: 64 ALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGA 123
D K +K +G KG A + + A E K G
Sbjct: 851 --------LAVDTGKAEEPVKSECTEEAEEGP---AKGKDAEAAEATAEGALKAEKKEGG 899
Query: 124 SKVATKTKATGA-----------SKKLKKATGASKKSVKTPKKA-KKPAATRKSSKNPKK 171
S AT K++GA + ++ +A G K + +P+ + P +++ +P+K
Sbjct: 900 SGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQK 959
Query: 172 P---KTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKP 207
P K +K + A P K +P A TKP P
Sbjct: 960 PLDLKQLKQRAAAIPPIVTKVHEPPREDAAPTKPAPPAP 998
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 44.7 bits (104), Expect = 6e-05
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 9 PAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSS----KERGGVSLA- 63
PAA+AAPE + + + PA+ AA +P P+ +E +A+SS K G + +
Sbjct: 90 PAAAAAPEAGASPVEKEAPAEGEAA---EPGSPTAAEGEAASAASSTSSPKAEDGATPSP 146
Query: 64 ------------ALKKALAAAGYDVEKNNSRIKLG--IKSLVSKGTLVQTKGTGASGSFK 109
+ KK+ +G+ +KN G ++ ++G + G A+ + +
Sbjct: 147 SNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAE 206
Query: 110 LNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP 169
+ PG A + A G + K A+ K P + AA
Sbjct: 207 AGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAA-------- 258
Query: 170 KKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKKK 215
++P V+ KK ++ A A A + +A P ++AAP ++
Sbjct: 259 EEPSKVEEKKAEEAGASAAACEAPSAAG----PGAPPEQEAAPAEE 300
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 44.7 bits (104), Expect = 6e-05
Identities = 54/235 (22%), Positives = 87/235 (37%), Gaps = 26/235 (11%)
Query: 6 PPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAAL 65
P PA ++A L K K A A + +K A PS + S SK V+
Sbjct: 753 PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTT 812
Query: 66 KKALAAAGYD-------VEKNNSRIK-----LGIKSLVSKGTLVQTKGTGASGSFKLNKK 113
A+A+ G + K + IK +K + +K ++ + + K
Sbjct: 813 AAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKT 872
Query: 114 ASSVETKPGASKVATKTKATGASKK------LKKATGASKKSVKTPKKAKKPAATRKSSK 167
+ T P A V ++ KAT + + K ++K S TP+ ++ T
Sbjct: 873 TTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDL 932
Query: 168 NPKKPKTVKPKKVAKSP--AKAKAVKPKAAKARVTKP------KTAKPKKAAPKK 214
+ K + + P +AK K A A KP KTA P +A K+
Sbjct: 933 KNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQ 987
Score = 33.1 bits (74), Expect = 0.18
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 101 GTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPA 160
GTG + NK E P K KTK ++ K +T SK + K+PA
Sbjct: 680 GTGNDITTPPNK-----ELPPSPEK---KTKPLATTQPAKTST--SKAKTQPTSLPKQPA 729
Query: 161 ATRKSSKNPKKPKTVKPKKVAKSPAKAKAV---KPKAAKARVTKPKTAKPKKAAPKK 214
T N KKP ++ V +P K AV +P ++ KPK KA K+
Sbjct: 730 PTTIGGLN-KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKR 785
Score = 30.4 bits (67), Expect = 1.2
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 17 KPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYDV 76
+P G+ + AAA+ +KP +V++ AS+ K+ G KK Y
Sbjct: 948 QPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKK----VSYSH 1003
Query: 77 EKNNSRIKLGIKSLVSKGTL-VQTKGTGASG-SFKLNKKASSVETKPGASKVATKTKATG 134
++ K IK + G + +Q K S S K KA +++ KPG V +++
Sbjct: 1004 IQSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKA-NIKHKPGGGDVKIESQKLN 1062
Query: 135 ASKKLKKATGA 145
+K + G+
Sbjct: 1063 FKEKAQAKVGS 1073
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 44.7 bits (104), Expect = 6e-05
Identities = 54/235 (22%), Positives = 87/235 (37%), Gaps = 26/235 (11%)
Query: 6 PPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAAL 65
P PA ++A L K K A A + +K A PS + S SK V+
Sbjct: 488 PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTT 547
Query: 66 KKALAAAGYD-------VEKNNSRIK-----LGIKSLVSKGTLVQTKGTGASGSFKLNKK 113
A+A+ G + K + IK +K + +K ++ + + K
Sbjct: 548 AAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKT 607
Query: 114 ASSVETKPGASKVATKTKATGASKK------LKKATGASKKSVKTPKKAKKPAATRKSSK 167
+ T P A V ++ KAT + + K ++K S TP+ ++ T
Sbjct: 608 TTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDL 667
Query: 168 NPKKPKTVKPKKVAKSP--AKAKAVKPKAAKARVTKP------KTAKPKKAAPKK 214
+ K + + P +AK K A A KP KTA P +A K+
Sbjct: 668 KNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQ 722
Score = 35.4 bits (80), Expect = 0.037
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 26/203 (12%)
Query: 15 PEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGY 74
P+K ++K P + K + A P + +K RG L L +
Sbjct: 341 PQKMTEKSESKTPGEGKKEDKSRMAEPMKGYM-----RPTKSRG------LTPLLPKSTI 389
Query: 75 DVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATG 134
++ + ++K + +G V GTG + NK E P K KTK
Sbjct: 390 QEQERHKQLKSAGIARPEEGRPV-VSGTGNDITTPPNK-----ELPPSPEK---KTKPLA 440
Query: 135 ASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAV---K 191
++ K +T SK + K+PA T N KKP ++ V +P K AV +
Sbjct: 441 TTQPAKTST--SKAKTQPTSLPKQPAPTTIGGLN-KKPMSLASGLVPAAPPKRPAVASAR 497
Query: 192 PKAAKARVTKPKTAKPKKAAPKK 214
P ++ KPK KA K+
Sbjct: 498 PSILPSKDVKPKPIADAKAPEKR 520
Score = 30.8 bits (68), Expect = 0.91
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 115 SSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKA--KKPAATRKSSKNPKKP 172
S VE P S+VA ASK ++ K ++TP+K K + T K K
Sbjct: 306 SKVEAPP--SEVADTLVIMTASKGVRLPE-PKDKILETPQKMTEKSESKTPGEGKKEDKS 362
Query: 173 KTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAA 211
+ +P K P K++ + P K+ + + + K K+A
Sbjct: 363 RMAEPMKGYMRPTKSRGLTPLLPKSTIQEQERHKQLKSA 401
Score = 30.4 bits (67), Expect = 1.2
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 17 KPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYDV 76
+P G+ + AAA+ +KP +V++ AS+ K+ G KK Y
Sbjct: 683 QPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKK----VSYSH 738
Query: 77 EKNNSRIKLGIKSLVSKGTL-VQTKGTGASG-SFKLNKKASSVETKPGASKVATKTKATG 134
++ K IK + G + +Q K S S K KA +++ KPG V +++
Sbjct: 739 IQSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKA-NIKHKPGGGDVKIESQKLN 797
Query: 135 ASKKLKKATGA 145
+K + G+
Sbjct: 798 FKEKAQAKVGS 808
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 44.7 bits (104), Expect = 6e-05
Identities = 54/235 (22%), Positives = 87/235 (37%), Gaps = 26/235 (11%)
Query: 6 PPAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAAL 65
P PA ++A L K K A A + +K A PS + S SK V+
Sbjct: 753 PKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQTVAKTTT 812
Query: 66 KKALAAAGYD-------VEKNNSRIK-----LGIKSLVSKGTLVQTKGTGASGSFKLNKK 113
A+A+ G + K + IK +K + +K ++ + + K
Sbjct: 813 AAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSVPADLSRPKSTSTSSMKKT 872
Query: 114 ASSVETKPGASKVATKTKATGASKK------LKKATGASKKSVKTPKKAKKPAATRKSSK 167
+ T P A V ++ KAT + + K ++K S TP+ ++ T
Sbjct: 873 TTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDL 932
Query: 168 NPKKPKTVKPKKVAKSP--AKAKAVKPKAAKARVTKP------KTAKPKKAAPKK 214
+ K + + P +AK K A A KP KTA P +A K+
Sbjct: 933 KNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQ 987
Score = 33.1 bits (74), Expect = 0.18
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 101 GTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPA 160
GTG + NK E P K KTK ++ K +T SK + K+PA
Sbjct: 680 GTGNDITTPPNK-----ELPPSPEK---KTKPLATTQPAKTST--SKAKTQPTSLPKQPA 729
Query: 161 ATRKSSKNPKKPKTVKPKKVAKSPAKAKAV---KPKAAKARVTKPKTAKPKKAAPKK 214
T N KKP ++ V +P K AV +P ++ KPK KA K+
Sbjct: 730 PTTIGGLN-KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKR 785
Score = 30.4 bits (67), Expect = 1.2
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 17 KPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYDV 76
+P G+ + AAA+ +KP +V++ AS+ K+ G KK Y
Sbjct: 948 QPGGGRAKVEKKTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKK----VSYSH 1003
Query: 77 EKNNSRIKLGIKSLVSKGTL-VQTKGTGASG-SFKLNKKASSVETKPGASKVATKTKATG 134
++ K IK + G + +Q K S S K KA +++ KPG V +++
Sbjct: 1004 IQSKCGSKDNIKHVPGGGNVQIQNKKVDISKVSSKCGSKA-NIKHKPGGGDVKIESQKLN 1062
Query: 135 ASKKLKKATGA 145
+K + G+
Sbjct: 1063 FKEKAQAKVGS 1073
>gi|56676330 HP1-BP74 [Homo sapiens]
Length = 553
Score = 44.7 bits (104), Expect = 6e-05
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 7/167 (4%)
Query: 28 AKAAAASKKKPAG----PSVSELIVQAASSSKERGGVSLAALKKALAAA--GYDVEKNNS 81
++ A A K+ P P + ++ +A + ++ G S+ A++K + ++E+
Sbjct: 142 SQLARAQKQTPMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGY 201
Query: 82 RIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGASKKLKK 141
+K +K +++G + Q KG GASGSF + +K+ K K + KL+
Sbjct: 202 LLKQALKRELNRGVIKQVKGKGASGSFVVVQKSRKTPQKSRNRKNRSSAVDPEPQVKLED 261
Query: 142 ATGASKKSVKTPKKAKKPAATRKSSK-NPKKPKTVKPKKVAKSPAKA 187
+ + PK+A + S+ PK ++P+ + + +A
Sbjct: 262 VLPLAFTRLCEPKEASYSLIRKYVSQYYPKLRVDIRPQLLKNALQRA 308
Score = 37.4 bits (85), Expect = 0.010
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 14/210 (6%)
Query: 19 LAGKKAKKPAKAAAASKKKPAGPSVSEL-IVQAASSSKERGGVSLAALKKALAAAGYDVE 77
+ GK A + + +K G S+ E I+ A ++ E S ALKK +
Sbjct: 317 ITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCSTTALKKYVLENHPGTN 376
Query: 78 KNNSR--IKLGIKSLVSKGTLVQTKGTGASGSFKL------NKKASSVETKPGASKVATK 129
N +K ++ G + Q G G SG+F+L + + +P S+ +
Sbjct: 377 SNYQMHLLKKTLQKCEKNGWMEQISGKGFSGTFQLCFPYYPSPGVLFPKKEPDDSRDEDE 436
Query: 130 TKATGASKKLKKATGASKKSV--KTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKA 187
+ + + + K+ + KTP K+ AA+ K + PK ++ P
Sbjct: 437 DEDESSEEDSEDEEPPPKRRLQKKTPAKSPGKAASVKQRGSKPAPKVSAAQRGKARPLPK 496
Query: 188 KAVKPKAAKARVTKPKTA---KPKKAAPKK 214
KA A+ T+P + KP + KK
Sbjct: 497 KAPPKAKTPAKKTRPSSTVIKKPSGGSSKK 526
Score = 32.0 bits (71), Expect = 0.41
Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 70/203 (34%)
Query: 83 IKLGIKSLVSKGTLVQTKGTGASGSFKLNKK------ASSVETKPGASKVAT----KTKA 132
+K ++ V +G L Q G GASG+F+L K S+ S +A KT +
Sbjct: 301 LKNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCS 360
Query: 133 TGASKK-----------------LKKATGASKKS-------------------------- 149
T A KK LKK +K+
Sbjct: 361 TTALKKYVLENHPGTNSNYQMHLLKKTLQKCEKNGWMEQISGKGFSGTFQLCFPYYPSPG 420
Query: 150 VKTPKK---------AKKPAATRKSSKNPKKP--KTVKPKKVAKSPAKAKAVKPKAAK-- 196
V PKK + ++ + S++ + P + ++ K AKSP KA +VK + +K
Sbjct: 421 VLFPKKEPDDSRDEDEDEDESSEEDSEDEEPPPKRRLQKKTPAKSPGKAASVKQRGSKPA 480
Query: 197 ARVTKPKTAK----PKKAAPKKK 215
+V+ + K PKKA PK K
Sbjct: 481 PKVSAAQRGKARPLPKKAPPKAK 503
Score = 28.1 bits (61), Expect = 5.9
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Query: 7 PAPAASAAPE---KPLAGK---KAKKPAKAAAASK---KKPAGPSVSELIVQAASSSKER 57
PAP SAA +PL K KAK PAK S KKP+G S + A S+ KE
Sbjct: 479 PAPKVSAAQRGKARPLPKKAPPKAKTPAKKTRPSSTVIKKPSGGSSKK---PATSARKE- 534
Query: 58 GGVSLAALKKALAAAGYDVEK 78
V L K+ + V+K
Sbjct: 535 --VKLPGKGKSTMKKSFRVKK 553
>gi|109637763 calpastatin isoform h [Homo sapiens]
Length = 769
Score = 43.9 bits (102), Expect = 1e-04
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 110 LNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP 169
+++K S +KPG K + + KA T A + T A A ++ SS NP
Sbjct: 27 VSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRTYAGGTASATKVSASSGATSKSSSMNP 86
Query: 170 KKPKTVKPKKVAKSPA-KAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
+ K VK + KS + K V K K++ KPK K+ PK+
Sbjct: 87 TETKAVKTEPEKKSQSTKLSVVHEK--KSQEGKPKEHTEPKSLPKQ 130
Score = 36.6 bits (83), Expect = 0.017
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 28/188 (14%)
Query: 16 EKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYD 75
+KP A + +P +AAAA + E + + S S + G + +K A+ G
Sbjct: 6 QKPAA---SPRPRRAAAARR-------THEHVSEKTSESPSKPGEKKGSDEKKAASLG-- 53
Query: 76 VEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGA 135
+SR G GT TK + +SG+ + + ETK ++ K+++T
Sbjct: 54 -SSQSSRTYAG-------GTASATKVSASSGATSKSSSMNPTETKAVKTEPEKKSQSTKL 105
Query: 136 SKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAA 195
S +K + K T K+ A+ S + K V + A+ K+ +PK
Sbjct: 106 SVVHEKKSQEGKPKEHTEPKSLPKQASDTGSNDAHNKKAV--SRSAEQQPSEKSTEPK-- 161
Query: 196 KARVTKPK 203
TKP+
Sbjct: 162 ----TKPQ 165
Score = 27.7 bits (60), Expect = 7.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 128 TKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPK 170
T+T A K KKA +SK + K KAK A T + + PK
Sbjct: 726 TETSQNTAKDKCKKAASSSK-APKNGGKAKDSAKTTEETSKPK 767
>gi|109637757 calpastatin isoform e [Homo sapiens]
Length = 756
Score = 43.9 bits (102), Expect = 1e-04
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 110 LNKKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP 169
+++K S +KPG K + + KA T A + T A A ++ SS NP
Sbjct: 27 VSEKTSESPSKPGEKKGSDEKKAASLGSSQSSRTYAGGTASATKVSASSGATSKSSSMNP 86
Query: 170 KKPKTVKPKKVAKSPA-KAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
+ K VK + KS + K V K K++ KPK K+ PK+
Sbjct: 87 TETKAVKTEPEKKSQSTKLSVVHEK--KSQEGKPKEHTEPKSLPKQ 130
Score = 36.6 bits (83), Expect = 0.017
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 28/188 (14%)
Query: 16 EKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALKKALAAAGYD 75
+KP A + +P +AAAA + E + + S S + G + +K A+ G
Sbjct: 6 QKPAA---SPRPRRAAAARR-------THEHVSEKTSESPSKPGEKKGSDEKKAASLG-- 53
Query: 76 VEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKVATKTKATGA 135
+SR G GT TK + +SG+ + + ETK ++ K+++T
Sbjct: 54 -SSQSSRTYAG-------GTASATKVSASSGATSKSSSMNPTETKAVKTEPEKKSQSTKL 105
Query: 136 SKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAA 195
S +K + K T K+ A+ S + K V + A+ K+ +PK
Sbjct: 106 SVVHEKKSQEGKPKEHTEPKSLPKQASDTGSNDAHNKKAV--SRSAEQQPSEKSTEPK-- 161
Query: 196 KARVTKPK 203
TKP+
Sbjct: 162 ----TKPQ 165
Score = 27.7 bits (60), Expect = 7.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 128 TKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPK 170
T+T A K KKA +SK + K KAK A T + + PK
Sbjct: 713 TETSQNTAKDKCKKAASSSK-APKNGGKAKDSAKTTEETSKPK 754
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 43.1 bits (100), Expect = 2e-04
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 23/213 (10%)
Query: 7 PAPAASAAPEKP---LAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKE--RGGVS 61
P+P+ + +P +P G+ A P KA S KKPA P + + E + G
Sbjct: 606 PSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKPGDP 665
Query: 62 LAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKP 121
A +K + +R ++L G+ G+ SGS ++ S
Sbjct: 666 REARRK----------ERPARTPPRRRTLSGSGS---GSGSSYSGSSSRSRSLSVSSVSS 712
Query: 122 GASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVA 181
+S ++ + A + A AS S ++ PA TRK KK VK +K
Sbjct: 713 VSSATSSSSSAHSVDSEDMYADLASPVS-SASSRSPAPAQTRKEKGKSKKEDGVKEEKRK 771
Query: 182 K--SPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
+ S K+ KP A +P T P++A P
Sbjct: 772 RDSSTQPPKSAKPPAGGKSSQQPST--PQQAPP 802
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 109 KLNKKASSVETKPGASKV-ATKTKATGASKK---------LKKATGA-----SKKSVKTP 153
K+ K+ ++ K SK+ AT T+ T + + LK T A +KK++ T
Sbjct: 802 KMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTT 861
Query: 154 KKAKKPAATRKSSKNPKKPK--TVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA-KPKK 209
+ KP T K K T KP+K K+P K + K RV KPKT P+K
Sbjct: 862 EIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTPRK 920
Score = 40.8 bits (94), Expect = 9e-04
Identities = 40/138 (28%), Positives = 56/138 (40%), Gaps = 17/138 (12%)
Query: 91 VSKGTLVQTKGTGASG---SFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASK 147
V+K T V+TK T + S +K +S + K + K A SK L K T ++
Sbjct: 144 VNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAP-TSKVLAKPTPKAE 202
Query: 148 KSVK----------TPKKAKKPAATRKSSKNPK--KPKTVKPKKVAKSPAKAKAVKPKAA 195
+ K TP K+PA+T P K PK+ A + K+ PK
Sbjct: 203 TTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP 262
Query: 196 KARVTK-PKTAKPKKAAP 212
TK P PK+ AP
Sbjct: 263 APTTTKEPAPTTPKEPAP 280
Score = 40.4 bits (93), Expect = 0.001
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 118 ETKPGASKVATKTKATGASKKLKK-ATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
E P +K A T A K+ A K+ T K P T+ + PK+P
Sbjct: 246 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT 305
Query: 177 PKKVA----KSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
PKK A K PA +P + P T +P PK+
Sbjct: 306 PKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 347
Score = 40.4 bits (93), Expect = 0.001
Identities = 34/119 (28%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP-- 169
KK + E P +K T T + K T + P K+PA T P
Sbjct: 592 KKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 651
Query: 170 -KKPKTVKPKKVA---------KSPAKAKAVKPKAAKARVTKPKTAK------PKKAAP 212
K+P PKK A K P + KP + T P T K PKK AP
Sbjct: 652 LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAP 710
Score = 40.4 bits (93), Expect = 0.001
Identities = 51/214 (23%), Positives = 77/214 (35%), Gaps = 12/214 (5%)
Query: 7 PAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALK 66
P A P++P A KKPA + P+ SE+ + S
Sbjct: 689 PKETAPTTPKEP-APTTPKKPAPTTPETPP----PTTSEVSTPTTTKEPTTIHKSPDEST 743
Query: 67 KALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKV 126
L+A NS + G+ + + T A ++ ET A K+
Sbjct: 744 PELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKM 803
Query: 127 ----ATKTKATGASKKLKKATGASKKSVK--TPKKAKKPAATRKSSKNPKKPKTVKPKKV 180
AT T+ T SK T + + + TP K T + K KT+ ++
Sbjct: 804 TKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEI 863
Query: 181 AKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
P + K +A ++ T PK KP K APKK
Sbjct: 864 MNKPEETAKPKDRATNSKATTPKPQKPTK-APKK 896
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 118 ETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKN-PKKPKTVK 176
E P K T A K+ + KS T K P T++ + PK+P
Sbjct: 379 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 438
Query: 177 PKKVAKSPAK--AKAVKPKAAKARVTKPKTAKPKKAAP 212
PKK A + K A + A KP PK+ AP
Sbjct: 439 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAP 476
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 127 ATKTKATGASKKLKKATGASKKSVKT------PKKAKKPAATRKSSKNPKKPKTVKPKKV 180
A TK + + A A KK T P K+PA T +P PK P
Sbjct: 334 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 393
Query: 181 AKSPAKAKAVKPKAAKARVTKPKTAKP---KKAAP 212
+P K P K+ T PK P K+ AP
Sbjct: 394 KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAP 428
Score = 37.0 bits (84), Expect = 0.013
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 128 TKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKA 187
T TK+ + K T K + TPK+ PA T P PK P +P
Sbjct: 289 TTTKSAPTTPKEPAPTTPKKPAPTTPKE---PAPTTPKEPTPTTPKEPAPTTKEPAPTTP 345
Query: 188 KAVKPKAAKARVTKPKTAKPKKAAP 212
K P A K KP PK+ AP
Sbjct: 346 KEPAPTAPK----KPAPTTPKEPAP 366
Score = 37.0 bits (84), Expect = 0.013
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 113 KASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKP 172
K++ TK A T TK+ + K T + + TPK+ + + PK+P
Sbjct: 394 KSAPTTTKEPAP---TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP 450
Query: 173 KTVKPKKVA----KSPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
PK+ A K PA +P + T P T PKK P
Sbjct: 451 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT--PKKLTP 492
Score = 37.0 bits (84), Expect = 0.013
Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 22/196 (11%)
Query: 14 APEKPLAGKKAKKPAKAAAASKKKPAGPSVS-------ELIVQAASSSKERGGVSLAALK 66
+P++ A+ KA S K+P P+ E+ A + ER L
Sbjct: 738 SPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER---DLRTTP 794
Query: 67 KALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKV 126
+ AA ++ + + K+ SK T T+ T + K ++++T A KV
Sbjct: 795 ETTTAAPKMTKETATTTE---KTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKV 851
Query: 127 ATKTKATGASKKLKKATGASK-------KSVKTPKKAKKPAATRK--SSKNPKKPKTVKP 177
T K ++ + K +K TPK K A +K S+K PK V+
Sbjct: 852 TTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRK 911
Query: 178 KKVAKSPAKAKAVKPK 193
K +P K + P+
Sbjct: 912 PKTTPTPRKMTSTMPE 927
Score = 35.8 bits (81), Expect = 0.028
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 11/97 (11%)
Query: 118 ETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKP 177
E P + T T + KA + P K+PA T PK+P P
Sbjct: 513 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT-----TPKEPAPTTP 567
Query: 178 KKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
K+ A P K P K +P PKK APK+
Sbjct: 568 KETA--PTTPKGTAPTTLK----EPAPTTPKKPAPKE 598
Score = 35.0 bits (79), Expect = 0.048
Identities = 34/118 (28%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 109 KLNKKASSVETKPGASKVATKTKATG---ASKKLKKATGASKKSVKTPKKAKKPAATRKS 165
K KA + P + T T AS K+ T + KS T K P T+ +
Sbjct: 196 KPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA 255
Query: 166 SKNPKKPKT--------VKPKKVAKSPAKAKAVKPKAAKARVTKPK---TAKPKKAAP 212
PK+P PK+ A P K P K+ T PK PKK AP
Sbjct: 256 PTTPKEPAPTTTKEPAPTTPKEPA--PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP 311
Score = 34.3 bits (77), Expect = 0.082
Identities = 52/217 (23%), Positives = 69/217 (31%), Gaps = 23/217 (10%)
Query: 4 TVPPAPAASAAPEK-PLAGKKAKK--PAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
T P PA + E P KK P K A + +KPA + EL
Sbjct: 469 TTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPE 528
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTG-----ASGSFKLNKKAS 115
A AA E + K + + K T + L + A
Sbjct: 529 EPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 588
Query: 116 SVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTV 175
+ KP ++A T S K + K P K+PA T PK+P
Sbjct: 589 TTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT-APTTPKEPAPT-----TPKEPAPT 642
Query: 176 KPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
PK A + K A T PK PK+ AP
Sbjct: 643 TPKGTAPTTLKEPA---------PTTPKKPAPKELAP 670
Score = 32.7 bits (73), Expect = 0.24
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 113 KASSVETKPGASKVATKTKATGASKK-LKKATGASKKSVKTPKKAKKPAATRKSSK---N 168
K ++ T G + K A KK K + T KPA T
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 627
Query: 169 PKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
PK+P PK+ A P K P K +P PKK APK+
Sbjct: 628 PKEPAPTTPKEPA--PTTPKGTAPTTLK----EPAPTTPKKPAPKE 667
Score = 32.3 bits (72), Expect = 0.31
Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 118 ETKPGASKVATKTKATGASKKLKK-ATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
E P +K A T A KK A K+ T K P ++ + K+P
Sbjct: 285 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 344
Query: 177 PKKVA----KSPAKAKAVKPKAAKARVTKPKTAK-PKKAAPKK 214
PK+ A K PA +P + P T K P PK+
Sbjct: 345 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 387
Score = 32.0 bits (71), Expect = 0.41
Identities = 27/114 (23%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP-- 169
KK + E P +K T T + + K T + P KKPA T + P
Sbjct: 661 KKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTT 720
Query: 170 ---------KKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
K+P T+ +P + PKA + +P K A K
Sbjct: 721 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATK 774
Score = 30.8 bits (68), Expect = 0.91
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKK 171
KK + K A +T T KKL T K + TP+K + P++
Sbjct: 464 KKPAPTTPKEPAPTTPKETAPT-TPKKLTPTT-PEKLAPTTPEKPAPTTPEELAPTTPEE 521
Query: 172 PKTVKPKKVAKSPAKAKAVKPKAAKARVT--KPKTAKPKKAAP 212
P P++ A + KA A A T +P PK+ AP
Sbjct: 522 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 564
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 116 SVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTV 175
S T P T + + K T K + TPK+ + KKP
Sbjct: 410 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 469
Query: 176 KPKKVA------KSPAKAKAVKP----KAAKARVTKPKTAKPKKAAP 212
PK+ A +P K + P K A KP P++ AP
Sbjct: 470 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAP 516
Score = 29.3 bits (64), Expect = 2.6
Identities = 47/210 (22%), Positives = 67/210 (31%), Gaps = 14/210 (6%)
Query: 3 ETVPPAPAASA--APEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
E P P A+A P++P P + A + K+PA + E A ++ K
Sbjct: 529 EPAPTTPKAAAPNTPKEPAP----TTPKEPAPTTPKEPAPTTPKET---APTTPKGTAPT 581
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFK---LNKKASSV 117
+L E + K + K KGT + + K +
Sbjct: 582 TLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 641
Query: 118 ETKPGASKVATKTKATGASKK-LKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
T G + K A KK K + T + KPA T P PK
Sbjct: 642 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPA 701
Query: 177 PKKVAKSPAKAKAVKPKAAKARVTKPKTAK 206
P K PA P + V+ P T K
Sbjct: 702 P-TTPKKPAPTTPETPPPTTSEVSTPTTTK 730
Score = 28.9 bits (63), Expect = 3.5
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 100 KGTGASGSFKLNKKASSVETKPGASKVA-TKTKATGASKKLKKATGASKKSVKTPKKAKK 158
KGT + L + A + KP ++A T TK ++ K A K++ P K+
Sbjct: 645 KGTAPT---TLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA--PTTPKE 699
Query: 159 PAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPK 213
PA T PKKP P+ P ++ P K T K+ P ++ P+
Sbjct: 700 PAPT-----TPKKPAPTTPE--TPPPTTSEVSTPTTTKEPTTIHKS--PDESTPE 745
Score = 27.7 bits (60), Expect = 7.7
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 8/100 (8%)
Query: 118 ETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAAT---RKSSKNPKKPKT 174
E P K T T + K+ + K P KKPA T + PK+P
Sbjct: 316 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE-PAPTAPKKPAPTTPKEPAPTTPKEPAP 374
Query: 175 VKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKP--KKAAP 212
K+ SP K P K+ T K P K+AP
Sbjct: 375 TTTKE--PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 412
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 42.4 bits (98), Expect = 3e-04
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 109 KLNKKASSVETKPGASKV-ATKTKATGASKK---------LKKATGA-----SKKSVKTP 153
K+ K+ ++ K SK+ AT T+ T + + LK T A +KK++ T
Sbjct: 843 KMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTT 902
Query: 154 KKAKKPAATRKSSKNPKKPK--TVKPKKVAKSPAKAKAVKPKAAKARVTKPKTA-KPKK 209
+ KP T K K T KP+K K+P K + K RV KPKT P+K
Sbjct: 903 EIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTPRK 961
Score = 40.8 bits (94), Expect = 9e-04
Identities = 40/138 (28%), Positives = 56/138 (40%), Gaps = 17/138 (12%)
Query: 91 VSKGTLVQTKGTGASG---SFKLNKKASSVETKPGASKVATKTKATGASKKLKKATGASK 147
V+K T V+TK T + S +K +S + K + K A SK L K T ++
Sbjct: 185 VNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAP-TSKVLAKPTPKAE 243
Query: 148 KSVK----------TPKKAKKPAATRKSSKNPK--KPKTVKPKKVAKSPAKAKAVKPKAA 195
+ K TP K+PA+T P K PK+ A + K+ PK
Sbjct: 244 TTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP 303
Query: 196 KARVTK-PKTAKPKKAAP 212
TK P PK+ AP
Sbjct: 304 APTTTKEPAPTTPKEPAP 321
Score = 40.4 bits (93), Expect = 0.001
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 118 ETKPGASKVATKTKATGASKKLKK-ATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
E P +K A T A K+ A K+ T K P T+ + PK+P
Sbjct: 287 EPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTT 346
Query: 177 PKKVA----KSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
PKK A K PA +P + P T +P PK+
Sbjct: 347 PKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE 388
Score = 40.4 bits (93), Expect = 0.001
Identities = 34/119 (28%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP-- 169
KK + E P +K T T + K T + P K+PA T P
Sbjct: 633 KKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTT 692
Query: 170 -KKPKTVKPKKVA---------KSPAKAKAVKPKAAKARVTKPKTAK------PKKAAP 212
K+P PKK A K P + KP + T P T K PKK AP
Sbjct: 693 LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAP 751
Score = 40.4 bits (93), Expect = 0.001
Identities = 51/214 (23%), Positives = 77/214 (35%), Gaps = 12/214 (5%)
Query: 7 PAPAASAAPEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGVSLAALK 66
P A P++P A KKPA + P+ SE+ + S
Sbjct: 730 PKETAPTTPKEP-APTTPKKPAPTTPETPP----PTTSEVSTPTTTKEPTTIHKSPDEST 784
Query: 67 KALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKV 126
L+A NS + G+ + + T A ++ ET A K+
Sbjct: 785 PELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKM 844
Query: 127 ----ATKTKATGASKKLKKATGASKKSVK--TPKKAKKPAATRKSSKNPKKPKTVKPKKV 180
AT T+ T SK T + + + TP K T + K KT+ ++
Sbjct: 845 TKETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEI 904
Query: 181 AKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
P + K +A ++ T PK KP K APKK
Sbjct: 905 MNKPEETAKPKDRATNSKATTPKPQKPTK-APKK 937
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 118 ETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKN-PKKPKTVK 176
E P K T A K+ + KS T K P T++ + PK+P
Sbjct: 420 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 479
Query: 177 PKKVAKSPAK--AKAVKPKAAKARVTKPKTAKPKKAAP 212
PKK A + K A + A KP PK+ AP
Sbjct: 480 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAP 517
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/95 (29%), Positives = 35/95 (36%), Gaps = 9/95 (9%)
Query: 127 ATKTKATGASKKLKKATGASKKSVKT------PKKAKKPAATRKSSKNPKKPKTVKPKKV 180
A TK + + A A KK T P K+PA T +P PK P
Sbjct: 375 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 434
Query: 181 AKSPAKAKAVKPKAAKARVTKPKTAKP---KKAAP 212
+P K P K+ T PK P K+ AP
Sbjct: 435 KSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAP 469
Score = 37.0 bits (84), Expect = 0.013
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 128 TKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKPKKVAKSPAKA 187
T TK+ + K T K + TPK+ PA T P PK P +P
Sbjct: 330 TTTKSAPTTPKEPAPTTPKKPAPTTPKE---PAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Query: 188 KAVKPKAAKARVTKPKTAKPKKAAP 212
K P A K KP PK+ AP
Sbjct: 387 KEPAPTAPK----KPAPTTPKEPAP 407
Score = 37.0 bits (84), Expect = 0.013
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 113 KASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKP 172
K++ TK A T TK+ + K T + + TPK+ + + PK+P
Sbjct: 435 KSAPTTTKEPAP---TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEP 491
Query: 173 KTVKPKKVA----KSPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
PK+ A K PA +P + T P T PKK P
Sbjct: 492 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT--PKKLTP 533
Score = 37.0 bits (84), Expect = 0.013
Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 22/196 (11%)
Query: 14 APEKPLAGKKAKKPAKAAAASKKKPAGPSVS-------ELIVQAASSSKERGGVSLAALK 66
+P++ A+ KA S K+P P+ E+ A + ER L
Sbjct: 779 SPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTER---DLRTTP 835
Query: 67 KALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFKLNKKASSVETKPGASKV 126
+ AA ++ + + K+ SK T T+ T + K ++++T A KV
Sbjct: 836 ETTTAAPKMTKETATTTE---KTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKV 892
Query: 127 ATKTKATGASKKLKKATGASK-------KSVKTPKKAKKPAATRK--SSKNPKKPKTVKP 177
T K ++ + K +K TPK K A +K S+K PK V+
Sbjct: 893 TTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKKPTSTKKPKTMPRVRK 952
Query: 178 KKVAKSPAKAKAVKPK 193
K +P K + P+
Sbjct: 953 PKTTPTPRKMTSTMPE 968
Score = 35.8 bits (81), Expect = 0.028
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 11/97 (11%)
Query: 118 ETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVKP 177
E P + T T + KA + P K+PA T PK+P P
Sbjct: 554 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPT-----TPKEPAPTTP 608
Query: 178 KKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
K+ A P K P K +P PKK APK+
Sbjct: 609 KETA--PTTPKGTAPTTLK----EPAPTTPKKPAPKE 639
Score = 35.0 bits (79), Expect = 0.048
Identities = 34/118 (28%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 109 KLNKKASSVETKPGASKVATKTKATG---ASKKLKKATGASKKSVKTPKKAKKPAATRKS 165
K KA + P + T T AS K+ T + KS T K P T+ +
Sbjct: 237 KPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA 296
Query: 166 SKNPKKPKT--------VKPKKVAKSPAKAKAVKPKAAKARVTKPK---TAKPKKAAP 212
PK+P PK+ A P K P K+ T PK PKK AP
Sbjct: 297 PTTPKEPAPTTTKEPAPTTPKEPA--PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAP 352
Score = 34.3 bits (77), Expect = 0.082
Identities = 52/217 (23%), Positives = 69/217 (31%), Gaps = 23/217 (10%)
Query: 4 TVPPAPAASAAPEK-PLAGKKAKK--PAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
T P PA + E P KK P K A + +KPA + EL
Sbjct: 510 TTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPE 569
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTG-----ASGSFKLNKKAS 115
A AA E + K + + K T + L + A
Sbjct: 570 EPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 629
Query: 116 SVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTV 175
+ KP ++A T S K + K P K+PA T PK+P
Sbjct: 630 TTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT-APTTPKEPAPT-----TPKEPAPT 683
Query: 176 KPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAP 212
PK A + K A T PK PK+ AP
Sbjct: 684 TPKGTAPTTLKEPA---------PTTPKKPAPKELAP 711
Score = 32.7 bits (73), Expect = 0.24
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 113 KASSVETKPGASKVATKTKATGASKK-LKKATGASKKSVKTPKKAKKPAATRKSSK---N 168
K ++ T G + K A KK K + T KPA T
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 668
Query: 169 PKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
PK+P PK+ A P K P K +P PKK APK+
Sbjct: 669 PKEPAPTTPKEPA--PTTPKGTAPTTLK----EPAPTTPKKPAPKE 708
Score = 32.3 bits (72), Expect = 0.31
Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 118 ETKPGASKVATKTKATGASKKLKK-ATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
E P +K A T A KK A K+ T K P ++ + K+P
Sbjct: 326 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 385
Query: 177 PKKVA----KSPAKAKAVKPKAAKARVTKPKTAK-PKKAAPKK 214
PK+ A K PA +P + P T K P PK+
Sbjct: 386 PKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 428
Score = 32.0 bits (71), Expect = 0.41
Identities = 27/114 (23%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNP-- 169
KK + E P +K T T + + K T + P KKPA T + P
Sbjct: 702 KKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTT 761
Query: 170 ---------KKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPKK 214
K+P T+ +P + PKA + +P K A K
Sbjct: 762 SEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATK 815
Score = 30.8 bits (68), Expect = 0.91
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Query: 112 KKASSVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKK 171
KK + K A +T T KKL T K + TP+K + P++
Sbjct: 505 KKPAPTTPKEPAPTTPKETAPT-TPKKLTPTT-PEKLAPTTPEKPAPTTPEELAPTTPEE 562
Query: 172 PKTVKPKKVAKSPAKAKAVKPKAAKARVT--KPKTAKPKKAAP 212
P P++ A + KA A A T +P PK+ AP
Sbjct: 563 PTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 605
Score = 29.6 bits (65), Expect = 2.0
Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 116 SVETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTV 175
S T P T + + K T K + TPK+ + KKP
Sbjct: 451 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPT 510
Query: 176 KPKKVA------KSPAKAKAVKP----KAAKARVTKPKTAKPKKAAP 212
PK+ A +P K + P K A KP P++ AP
Sbjct: 511 TPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAP 557
Score = 29.3 bits (64), Expect = 2.6
Identities = 47/210 (22%), Positives = 67/210 (31%), Gaps = 14/210 (6%)
Query: 3 ETVPPAPAASA--APEKPLAGKKAKKPAKAAAASKKKPAGPSVSELIVQAASSSKERGGV 60
E P P A+A P++P P + A + K+PA + E A ++ K
Sbjct: 570 EPAPTTPKAAAPNTPKEPAP----TTPKEPAPTTPKEPAPTTPKET---APTTPKGTAPT 622
Query: 61 SLAALKKALAAAGYDVEKNNSRIKLGIKSLVSKGTLVQTKGTGASGSFK---LNKKASSV 117
+L E + K + K KGT + + K +
Sbjct: 623 TLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP 682
Query: 118 ETKPGASKVATKTKATGASKK-LKKATGASKKSVKTPKKAKKPAATRKSSKNPKKPKTVK 176
T G + K A KK K + T + KPA T P PK
Sbjct: 683 TTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPA 742
Query: 177 PKKVAKSPAKAKAVKPKAAKARVTKPKTAK 206
P K PA P + V+ P T K
Sbjct: 743 P-TTPKKPAPTTPETPPPTTSEVSTPTTTK 771
Score = 28.9 bits (63), Expect = 3.5
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 100 KGTGASGSFKLNKKASSVETKPGASKVA-TKTKATGASKKLKKATGASKKSVKTPKKAKK 158
KGT + L + A + KP ++A T TK ++ K A K++ P K+
Sbjct: 686 KGTAPT---TLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA--PTTPKE 740
Query: 159 PAATRKSSKNPKKPKTVKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKPKKAAPK 213
PA T PKKP P+ P ++ P K T K+ P ++ P+
Sbjct: 741 PAPT-----TPKKPAPTTPE--TPPPTTSEVSTPTTTKEPTTIHKS--PDESTPE 786
Score = 27.7 bits (60), Expect = 7.7
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 8/100 (8%)
Query: 118 ETKPGASKVATKTKATGASKKLKKATGASKKSVKTPKKAKKPAAT---RKSSKNPKKPKT 174
E P K T T + K+ + K P KKPA T + PK+P
Sbjct: 357 EPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKE-PAPTAPKKPAPTTPKEPAPTTPKEPAP 415
Query: 175 VKPKKVAKSPAKAKAVKPKAAKARVTKPKTAKP--KKAAP 212
K+ SP K P K+ T K P K+AP
Sbjct: 416 TTTKE--PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAP 453
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.298 0.113 0.289
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,605,516
Number of Sequences: 37866
Number of extensions: 318502
Number of successful extensions: 5768
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 3119
Number of HSP's gapped (non-prelim): 1927
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.