HOXA11 31458

Name: HOXA11	Sequence: fasta or formatted (313aa)		NCBI GI: 5031759
Description: homeobox A11		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 32 7 C cysteine 1.9 6 1 D aspartate 3.8 12 1 E glutamate 6.7 21 2 F phenylalanine 3.8 12 3 G glycine 6.4 20 5 H histidine 1.9 6 2 I isoleucine 1.6 5 1 K lysine 4.8 15 2 L leucine 5.8 18 2 M methionine 1.6 5 1 N asparagine 3.8 12 1 P proline 8.0 25 2 Q glutamine 3.8 12 1 R arginine 7.7 24 4 S serine 12.5 39 4 T threonine 5.8 18 1 V valine 4.2 13 1 W tryptophan 0.6 2 1 Y tyrosine 5.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox A11 HOXC11 0.420 homeobox C11 HOXD11 0.397 homeobox D11 HOXA10 0.151 homeobox A10 isoform a HOXC10 0.141 homeobox C10 HOXD9 0.132 homeobox D9 HOXA9 0.132 homeobox A9 HOXC9 0.128 homeobox C9 HOXB9 0.125 homeobox B9 HOXD10 0.122 homeobox D10 HOXA10 0.122 homeobox A10 isoform b HOXD12 0.101 homeobox D12 HOXA5 0.099 homeobox A5 HOXB5 0.096 homeobox B5 HOXD3 0.096 homeobox D3 HOXC13 0.094 homeobox C13 HOXA13 0.093 homeobox A13 MEOX1 0.093 mesenchyme homeobox 1 isoform 1 MEOX2 0.093 mesenchyme homeobox 2 HOXC12 0.093 homeobox C12 MEOX1 0.091 mesenchyme homeobox 1 isoform 3 HOXA3 0.089 homeobox A3 isoform a HOXA3 0.089 homeobox A3 isoform a HOXD13 0.089 homeobox D13 HOXB2 0.089 homeobox B2 CDX1 0.088 caudal type homeobox 1 CDX2 0.088 caudal type homeobox 2 HOXA3 0.086 homeobox A3 isoform b HOXB8 0.086 homeobox B8 HOXA6 0.085 homeobox A6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.