GSX1 26151

Name: GSX1	Sequence: fasta or formatted (264aa)		NCBI GI: 33457326
Description: GS homeobox 1		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 28 8 C cysteine 3.4 9 1 D aspartate 3.4 9 3 E glutamate 4.2 11 1 F phenylalanine 3.0 8 1 G glycine 9.5 25 6 H histidine 3.8 10 1 I isoleucine 1.5 4 1 K lysine 5.3 14 2 L leucine 10.2 27 2 M methionine 1.5 4 1 N asparagine 1.9 5 1 P proline 11.0 29 3 Q glutamine 3.8 10 1 R arginine 5.7 15 2 S serine 11.4 30 3 T threonine 3.0 8 1 V valine 4.2 11 1 W tryptophan 0.4 1 1 Y tyrosine 2.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 GS homeobox 1 GSX2 0.360 GS homeobox 2 PDX1 0.148 pancreatic and duodenal homeobox 1 HOXB4 0.144 homeobox B4 HOXA2 0.142 homeobox A2 HOXD3 0.136 homeobox D3 MNX1 0.136 homeo box HB9 HOXA3 0.134 homeobox A3 isoform b HOXA3 0.134 homeobox A3 isoform a HOXA3 0.134 homeobox A3 isoform a HOXB3 0.134 homeobox B3 HOXA4 0.134 homeobox A4 NKX1-1 0.132 PREDICTED: NK1 homeobox 1 NKX1-1 0.126 PREDICTED: NK1 homeobox 1 HOXB5 0.123 homeobox B5 HOXD4 0.123 homeobox D4 HOXB2 0.123 homeobox B2 NKX1-1 0.121 PREDICTED: HPX-153 homeobox HOXC4 0.119 homeobox C4 HOXC4 0.119 homeobox C4 HOXA5 0.117 homeobox A5 HOXC5 0.117 homeobox C5 HOXA7 0.115 homeobox A7 HOXC6 0.107 homeobox C6 isoform 2 HOXC6 0.107 homeobox C6 isoform 1 NKX1-2 0.105 NK1 homeobox 2 NKX1-2 0.105 PREDICTED: NK1 homeobox 2 NKX1-2 0.105 PREDICTED: NK1 homeobox 2 NKX1-2 0.105 PREDICTED: NK1 homeobox 2 HOXB1 0.105 homeobox B1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.