GBX1 4905

Name: GBX1	Sequence: fasta or formatted (363aa)		NCBI GI: 149588930
Description: gastrulation brain homeo box 1		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.9 47 9 C cysteine 0.6 2 1 D aspartate 2.5 9 2 E glutamate 7.7 28 3 F phenylalanine 3.6 13 1 G glycine 12.7 46 7 H histidine 1.7 6 1 I isoleucine 1.9 7 1 K lysine 4.4 16 2 L leucine 8.8 32 2 M methionine 1.4 5 1 N asparagine 2.2 8 2 P proline 12.4 45 7 Q glutamine 3.6 13 2 R arginine 5.8 21 4 S serine 7.4 27 2 T threonine 3.9 14 2 V valine 4.4 16 2 W tryptophan 0.6 2 1 Y tyrosine 1.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gastrulation brain homeo box 1 GBX2 0.346 gastrulation brain homeo box 2 MNX1 0.107 homeo box HB9 HOXD11 0.103 homeobox D11 HOXB4 0.101 homeobox B4 HOXA4 0.097 homeobox A4 HOXC4 0.096 homeobox C4 HOXC4 0.096 homeobox C4 HOXA5 0.094 homeobox A5 HOXD3 0.093 homeobox D3 MEOX1 0.091 mesenchyme homeobox 1 isoform 1 NKX1-1 0.090 PREDICTED: HPX-153 homeobox NKX1-1 0.088 PREDICTED: NK1 homeobox 1 HOXA3 0.087 homeobox A3 isoform a HOXA3 0.087 homeobox A3 isoform a HMX3 0.087 H6 family homeobox 3 HOXB3 0.087 homeobox B3 HOXB2 0.087 homeobox B2 NKX1-2 0.087 PREDICTED: NK1 homeobox 2 NKX1-2 0.087 PREDICTED: NK1 homeobox 2 NKX1-2 0.087 PREDICTED: NK1 homeobox 2 ARX 0.086 aristaless related homeobox HOXB5 0.086 homeobox B5 EVX1 0.086 even-skipped homeobox 1 HOXD4 0.084 homeobox D4 NKX1-2 0.083 NK1 homeobox 2 HOXA10 0.083 homeobox A10 isoform a MEOX1 0.083 mesenchyme homeobox 1 isoform 3 PITX1 0.083 paired-like homeodomain transcription factor 1 [Hom... HMX1 0.083 homeo box (H6 family) 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.