HOXC8 2428

Name: HOXC8	Sequence: fasta or formatted (242aa)		NCBI GI: 12056969
Description: homeobox C8		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 13 1 C cysteine 1.7 4 1 D aspartate 2.9 7 1 E glutamate 10.7 26 4 F phenylalanine 4.5 11 2 G glycine 7.9 19 2 H histidine 4.1 10 2 I isoleucine 1.2 3 1 K lysine 6.6 16 2 L leucine 6.2 15 1 M methionine 1.7 4 1 N asparagine 5.4 13 2 P proline 5.8 14 1 Q glutamine 6.2 15 2 R arginine 6.2 15 2 S serine 10.7 26 2 T threonine 2.5 6 1 V valine 3.7 9 2 W tryptophan 1.2 3 1 Y tyrosine 5.4 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox C8 HOXB8 0.558 homeobox B8 HOXD8 0.523 homeobox D8 HOXA7 0.256 homeobox A7 HOXB7 0.227 homeobox B7 HOXC6 0.219 homeobox C6 isoform 1 HOXB6 0.215 homeobox B6 HOXC6 0.211 homeobox C6 isoform 2 HOXA6 0.194 homeobox A6 HOXB5 0.184 homeobox B5 HOXA5 0.169 homeobox A5 HOXC5 0.161 homeobox C5 HOXD4 0.151 homeobox D4 HOXB9 0.151 homeobox B9 HOXC4 0.147 homeobox C4 HOXC4 0.147 homeobox C4 HOXB4 0.147 homeobox B4 HOXD9 0.143 homeobox D9 HOXA4 0.143 homeobox A4 HOXC9 0.143 homeobox C9 HOXC10 0.140 homeobox C10 HOXA9 0.138 homeobox A9 PDX1 0.136 pancreatic and duodenal homeobox 1 HOXA10 0.134 homeobox A10 isoform a HOXA10 0.134 homeobox A10 isoform b HOXD10 0.130 homeobox D10 HOXA2 0.130 homeobox A2 HOXA1 0.128 homeobox A1 isoform a HOXD3 0.114 homeobox D3 HOXC11 0.114 homeobox C11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.