Guide to the Human Genome
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Name: LUC7L Sequence: fasta or formatted (371aa) NCBI GI: 41393554
Description:

LUC7-like isoform b

Referenced in:

Capping and Splicing
Xenobiotic Pathways

Other entries for this name:
alt prot [325aa] LUC7-like isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         29           1
 C cysteine            1.9          7           2
 D aspartate           6.7         25           2
 E glutamate          12.1         45           3
 F phenylalanine       2.2          8           2
 G glycine             4.6         17           2
 H histidine           3.2         12           1
 I isoleucine          2.7         10           1
 K lysine              7.0         26           3
 L leucine             8.4         31           2
 M methionine          2.2          8           1
 N asparagine          1.6          6           1
 P proline             1.1          4           2
 Q glutamine           3.8         14           3
 R arginine           17.8         66           5
 S serine             10.0         37           2
 T threonine           2.7         10           1
 V valine              2.7         10           1
 W tryptophan          0.5          2           1
 Y tyrosine            1.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   LUC7-like isoform b 
LUC7L                 0.870   LUC7-like isoform a 
LUC7L2                0.729   LUC7-like 2 
CROP                  0.265   cisplatin resistance-associated overexpressed protei...
CROP                  0.265   cisplatin resistance-associated overexpressed protei...
RSRC2                 0.091   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.091   arginine/serine-rich coiled-coil 2 isoform a 
DDX46                 0.085   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
RBM25                 0.076   RNA binding motif protein 25 
PPIG                  0.072   peptidylprolyl isomerase G 
LOC100286959          0.071   PREDICTED: hypothetical protein XP_002343921 
PRPF38B               0.069   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
ZC3H13                0.069   zinc finger CCCH-type containing 13 
SNRNP70               0.068   U1 small nuclear ribonucleoprotein 70 kDa 
DHX8                  0.068   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
SON                   0.065   SON DNA-binding protein isoform F 
SON                   0.065   SON DNA-binding protein isoform B 
SFRS11                0.064   splicing factor, arginine/serine-rich 11 
ZRANB2                0.064   zinc finger protein 265 isoform 1 
SFRS18                0.064   splicing factor, arginine/serine-rich 130 
SFRS18                0.064   splicing factor, arginine/serine-rich 130 
LOC100131202          0.062   PREDICTED: hypothetical protein 
LOC100133599          0.062   PREDICTED: hypothetical protein 
SFRS6                 0.062   arginine/serine-rich splicing factor 6 
NKTR                  0.062   natural killer-tumor recognition sequence 
DDX23                 0.059   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
SFRS4                 0.057   splicing factor, arginine/serine-rich 4 
LOC100170229          0.057   hypothetical protein LOC100170229 
TCHH                  0.057   trichohyalin 
ZRANB2                0.057   zinc finger protein 265 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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