Search of human proteins with 47778935

Search of human proteins with 47778935

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47778935 LIM domain only 3 [Homo sapiens]
         (145 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361802 LIM domain only 3 [Homo sapiens]                          316   4e-87
gi|47778935 LIM domain only 3 [Homo sapiens]                          316   4e-87
gi|4505005 LIM domain only 1 [Homo sapiens]                           283   3e-77
gi|214832219 LIM domain only 2 isoform 2 [Homo sapiens]               167   3e-42
gi|214832121 LIM domain only 2 isoform 2 [Homo sapiens]               167   3e-42
gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens]               167   3e-42
gi|5803072 LIM domain only 4 [Homo sapiens]                           159   8e-40
gi|33569216 LIM homeobox 9 isoform 1 [Homo sapiens]                   127   3e-30
gi|62241033 LIM homeobox 9 isoform 2 [Homo sapiens]                   127   3e-30
gi|15375314 LIM homeobox protein 4 [Homo sapiens]                     121   2e-28
gi|30795196 LIM homeobox protein 2 [Homo sapiens]                     121   2e-28
gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens]           119   7e-28
gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens]            119   7e-28
gi|4505007 LIM homeobox transcription factor 1, beta [Homo sapiens]   109   9e-25
gi|28893581 LIM homeobox transcription factor 1, alpha isoform a...   108   1e-24
gi|21956641 ISL LIM homeobox 2 [Homo sapiens]                         107   4e-24
gi|30410785 LIM homeobox protein 1 [Homo sapiens]                     105   1e-23
gi|115387114 islet-1 [Homo sapiens]                                   102   1e-22
gi|11641283 LIM homeobox protein 5 [Homo sapiens]                     101   2e-22
gi|50083287 LIM homeobox 8 [Homo sapiens]                             100   7e-22
gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens]           98   3e-21
gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens]           98   3e-21
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]       82   1e-16
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]       82   1e-16
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]       82   1e-16
gi|194272207 actin binding LIM protein family, member 2 isoform ...    74   3e-14
gi|153792514 actin binding LIM protein family, member 2 isoform ...    74   3e-14
gi|194272204 actin binding LIM protein family, member 2 isoform ...    74   3e-14
gi|194272202 actin binding LIM protein family, member 2 isoform ...    74   3e-14
gi|194272200 actin binding LIM protein family, member 2 isoform ...    74   3e-14

>gi|21361802 LIM domain only 3 [Homo sapiens]
          Length = 145

 Score =  316 bits (810), Expect = 4e-87
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60
           MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL
Sbjct: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60

Query: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120
           ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL
Sbjct: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120

Query: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145
           KNNMILCQTDYEEGLMKEGYAPQVR
Sbjct: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145


>gi|47778935 LIM domain only 3 [Homo sapiens]
          Length = 145

 Score =  316 bits (810), Expect = 4e-87
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60
           MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL
Sbjct: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60

Query: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120
           ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL
Sbjct: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120

Query: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145
           KNNMILCQTDYEEGLMKEGYAPQVR
Sbjct: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145


>gi|4505005 LIM domain only 1 [Homo sapiens]
          Length = 156

 Score =  283 bits (725), Expect = 3e-77
 Identities = 130/145 (89%), Positives = 134/145 (92%)

Query: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60
           MLSVQP  K KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL
Sbjct: 12  MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 71

Query: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120
           ILCRRDYLRLFG TGNCAACSKLIPAFEMVMRA+DNVYHLDCFACQLCNQRFCVGDKFFL
Sbjct: 72  ILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFL 131

Query: 121 KNNMILCQTDYEEGLMKEGYAPQVR 145
           KNNMILCQ DYEEG +   +  QV+
Sbjct: 132 KNNMILCQMDYEEGQLNGTFESQVQ 156


>gi|214832219 LIM domain only 2 isoform 2 [Homo sapiens]
          Length = 158

 Score =  167 bits (423), Expect = 3e-42
 Identities = 73/121 (60%), Positives = 85/121 (70%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C GC + I DRY LKA+D+YWHEDCL C  C CRLGEVG  LY K    LCRRDYLRLFG
Sbjct: 30  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 89

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
             G CA+C K I A+EM MR KD VYHL+CF C  C + FCVGD++ L N+ I+C+ D  
Sbjct: 90  QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 149

Query: 133 E 133
           E
Sbjct: 150 E 150


>gi|214832121 LIM domain only 2 isoform 2 [Homo sapiens]
          Length = 158

 Score =  167 bits (423), Expect = 3e-42
 Identities = 73/121 (60%), Positives = 85/121 (70%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C GC + I DRY LKA+D+YWHEDCL C  C CRLGEVG  LY K    LCRRDYLRLFG
Sbjct: 30  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 89

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
             G CA+C K I A+EM MR KD VYHL+CF C  C + FCVGD++ L N+ I+C+ D  
Sbjct: 90  QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 149

Query: 133 E 133
           E
Sbjct: 150 E 150


>gi|214832074 LIM domain only 2 isoform 1 [Homo sapiens]
          Length = 227

 Score =  167 bits (423), Expect = 3e-42
 Identities = 73/121 (60%), Positives = 85/121 (70%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C GC + I DRY LKA+D+YWHEDCL C  C CRLGEVG  LY K    LCRRDYLRLFG
Sbjct: 99  CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 158

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
             G CA+C K I A+EM MR KD VYHL+CF C  C + FCVGD++ L N+ I+C+ D  
Sbjct: 159 QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 218

Query: 133 E 133
           E
Sbjct: 219 E 219


>gi|5803072 LIM domain only 4 [Homo sapiens]
          Length = 165

 Score =  159 bits (402), Expect = 8e-40
 Identities = 67/126 (53%), Positives = 87/126 (69%)

Query: 11  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 70
           K CAGC  KI DR+LL A+D YWH  CLKC+CC  +LG++G++ YTK+ +ILCR DY+RL
Sbjct: 21  KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80

Query: 71  FGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTD 130
           FG +G C+AC + IPA E+VMRA+ NVYHL CF C  C  R   GD+F   N  + C+ D
Sbjct: 81  FGNSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140

Query: 131 YEEGLM 136
               L+
Sbjct: 141 RPTALI 146


>gi|33569216 LIM homeobox 9 isoform 1 [Homo sapiens]
          Length = 397

 Score =  127 bits (320), Expect = 3e-30
 Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 5/137 (3%)

Query: 9   KPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLG-EVGSTLYTKANLILCRRDY 67
           KP  CAGC  KI DRY L A+DK WH  CLKC  C+C+L  E   T + K   I C+ DY
Sbjct: 67  KPALCAGCGGKISDRYYLLAVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDY 124

Query: 68  LRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILC 127
            R F V   CA C   I A EMVMRA+D+VYHL CF C  CN+    GD F +K++++ C
Sbjct: 125 YRRFSVQ-RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYC 183

Query: 128 QTDYEEGLMKEGYAPQV 144
           +  +E  L++  Y PQ+
Sbjct: 184 RAHFET-LLQGEYPPQL 199


>gi|62241033 LIM homeobox 9 isoform 2 [Homo sapiens]
          Length = 388

 Score =  127 bits (320), Expect = 3e-30
 Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 5/137 (3%)

Query: 9   KPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLG-EVGSTLYTKANLILCRRDY 67
           KP  CAGC  KI DRY L A+DK WH  CLKC  C+C+L  E   T + K   I C+ DY
Sbjct: 58  KPALCAGCGGKISDRYYLLAVDKQWHLRCLKC--CECKLALESELTCFAKDGSIYCKEDY 115

Query: 68  LRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILC 127
            R F V   CA C   I A EMVMRA+D+VYHL CF C  CN+    GD F +K++++ C
Sbjct: 116 YRRFSVQ-RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYC 174

Query: 128 QTDYEEGLMKEGYAPQV 144
           +  +E  L++  Y PQ+
Sbjct: 175 RAHFET-LLQGEYPPQL 190


>gi|15375314 LIM homeobox protein 4 [Homo sapiens]
          Length = 390

 Score =  121 bits (303), Expect = 2e-28
 Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 7/133 (5%)

Query: 1   MLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANL 60
           ML V     P+ CAGCN+ I D+++LK LD++WH  CLKCA C  +L +     +++A  
Sbjct: 19  MLGVPMQQIPQ-CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAD---RCFSRAGS 74

Query: 61  ILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL 120
           + C+ D+ + FG    C AC + IP  ++V +A+D VYHL CFAC +CN++   GD+F+L
Sbjct: 75  VYCKEDFFKRFGT--KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYL 132

Query: 121 -KNNMILCQTDYE 132
            ++  ++C+ DYE
Sbjct: 133 MEDGRLVCKEDYE 145


>gi|30795196 LIM homeobox protein 2 [Homo sapiens]
          Length = 406

 Score =  121 bits (303), Expect = 2e-28
 Identities = 61/127 (48%), Positives = 77/127 (60%), Gaps = 4/127 (3%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLG-EVGSTLYTKANLILCRRDYLRLF 71
           CAGC  KI DRY L A+DK WH  CLKC  C+C+L  E   T ++K   I C+ DY R F
Sbjct: 53  CAGCGGKISDRYYLLAVDKQWHMRCLKC--CECKLNLESELTCFSKDGSIYCKEDYYRRF 110

Query: 72  GVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDY 131
            V   CA C   I A EMVMRA+D VYHL+CF C  CN+    GD F +K++++ C+  +
Sbjct: 111 SVQ-RCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHF 169

Query: 132 EEGLMKE 138
           E  L  E
Sbjct: 170 EALLQGE 176


>gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens]
          Length = 397

 Score =  119 bits (299), Expect = 7e-28
 Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 6/134 (4%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           CAGC++ I DR++LKALD++WH  CLKC+ C   L E     +++   + C+ D+ + FG
Sbjct: 31  CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAE---RCFSRGESVYCKDDFFKRFG 87

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQTDY 131
               CAAC   IP  ++V RA+D VYHL CFAC +C ++   GD+F+L +++ ++C+ DY
Sbjct: 88  T--KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 145

Query: 132 EEGLMKEGYAPQVR 145
           E    +E  A   R
Sbjct: 146 ETAKQREAEATAKR 159


>gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens]
          Length = 402

 Score =  119 bits (299), Expect = 7e-28
 Identities = 55/134 (41%), Positives = 84/134 (62%), Gaps = 6/134 (4%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           CAGC++ I DR++LKALD++WH  CLKC+ C   L E     +++   + C+ D+ + FG
Sbjct: 36  CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAE---RCFSRGESVYCKDDFFKRFG 92

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFL-KNNMILCQTDY 131
               CAAC   IP  ++V RA+D VYHL CFAC +C ++   GD+F+L +++ ++C+ DY
Sbjct: 93  T--KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADY 150

Query: 132 EEGLMKEGYAPQVR 145
           E    +E  A   R
Sbjct: 151 ETAKQREAEATAKR 164


>gi|4505007 LIM homeobox transcription factor 1, beta [Homo sapiens]
          Length = 372

 Score =  109 bits (272), Expect = 9e-25
 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 5/124 (4%)

Query: 10  PKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLR 69
           P  C GC R I DR+L++  +  WHE+CL+CA C   L    ++ Y +   + C++DY +
Sbjct: 30  PAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALT---TSCYFRDRKLYCKQDYQQ 86

Query: 70  LFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQT 129
           LF     C+ C + I   E VMRA + VYHL CF C +C ++   GD+F LK   +LC+ 
Sbjct: 87  LFAA--KCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKG 144

Query: 130 DYEE 133
           DYE+
Sbjct: 145 DYEK 148


>gi|28893581 LIM homeobox transcription factor 1, alpha isoform a
           [Homo sapiens]
          Length = 382

 Score =  108 bits (271), Expect = 1e-24
 Identities = 51/121 (42%), Positives = 72/121 (59%), Gaps = 5/121 (4%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C GC R I DR+LL+  D +WHE C++CA C   L    +T + +   + C+ DY +LF 
Sbjct: 35  CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLE---TTCFYRDKKLYCKYDYEKLFA 91

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
           V   C  C + I   E VMRA+ +VYHL CF C +C ++   GD+F LK   +LC+ DYE
Sbjct: 92  V--KCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149

Query: 133 E 133
           +
Sbjct: 150 K 150


>gi|21956641 ISL LIM homeobox 2 [Homo sapiens]
          Length = 359

 Score =  107 bits (267), Expect = 4e-24
 Identities = 51/127 (40%), Positives = 79/127 (62%), Gaps = 6/127 (4%)

Query: 13  CAGCNRKIKDRYLLKAL-DKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLF 71
           C GC  +I D+++L+   D  WH  CLKCA C   L E   T + +     C+RDY+RLF
Sbjct: 27  CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDET-CTCFVRDGKTYCKRDYVRLF 85

Query: 72  GVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDY 131
           G+   CA C     + ++VMRA+D+VYH++CF C +C+++   GD+F L+ + +LC+ D+
Sbjct: 86  GI--KCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADH 143

Query: 132 EEGLMKE 138
             GL+ E
Sbjct: 144 --GLLLE 148


>gi|30410785 LIM homeobox protein 1 [Homo sapiens]
          Length = 406

 Score =  105 bits (262), Expect = 1e-23
 Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 6/120 (5%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           CAGC R I DR+LL  LD+ WH  C++C  C C L E     +++   + C+ D+ R FG
Sbjct: 4   CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTE---KCFSREGKLYCKNDFFRCFG 60

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDK-FFLKNNMILCQTDY 131
               CA C++ I   ++V RA+  V+HL+CF C +CN++   G++ + +  N  +C+ DY
Sbjct: 61  T--KCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 118



 Score = 35.8 bits (81), Expect = 0.013
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 13  CAGCNRKIKDRYLLK-ALDKYWHEDCLKCACCDCRLGEVGSTLYT-KANLILCRRDYL 68
           CAGC + I    L++ A  K +H +C  C  C+ +L   G  LY    N  +C+ DYL
Sbjct: 63  CAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLS-TGEELYIIDENKFVCKEDYL 119


>gi|115387114 islet-1 [Homo sapiens]
          Length = 349

 Score =  102 bits (253), Expect = 1e-22
 Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 4/121 (3%)

Query: 13  CAGCNRKIKDRYLLKAL-DKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLF 71
           C GC  +I D+Y+L+   D  WH  CLKCA C+  L E   T + +     C+RDY+RL+
Sbjct: 17  CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDE-SCTCFVRDGKTYCKRDYIRLY 75

Query: 72  GVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDY 131
           G+   CA CS      + VMRA+  VYH++CF C  C+++   GD+F L+ + + C+ D+
Sbjct: 76  GI--KCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 133

Query: 132 E 132
           +
Sbjct: 134 D 134


>gi|11641283 LIM homeobox protein 5 [Homo sapiens]
          Length = 402

 Score =  101 bits (252), Expect = 2e-22
 Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 7/129 (5%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           CAGC R I DR+LL  LD+ WH  C++C  C   L E     +++   + C+ D+ R FG
Sbjct: 5   CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSE---KCFSREGKLYCKNDFFRRFG 61

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF-LKNNMILCQTDY 131
               CA C++ I   ++V +A+  V+HL+CF C +CN++   G++ + +  N  +C+ DY
Sbjct: 62  T--KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDY 119

Query: 132 -EEGLMKEG 139
                +KEG
Sbjct: 120 LSSSSLKEG 128


>gi|50083287 LIM homeobox 8 [Homo sapiens]
          Length = 356

 Score = 99.8 bits (247), Expect = 7e-22
 Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 3/120 (2%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C  C  +I D+YLLK  D  WH  CL C+ C   LG   ++ Y K   I C+ DY R +G
Sbjct: 75  CNSCGLEIVDKYLLKVNDLCWHVRCLSCSVCRTSLGR-HTSCYIKDKDIFCKLDYFRRYG 133

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
               C+ C + I + + V RAK NVYHL CFAC  C ++   G++F L    +LC+  Y+
Sbjct: 134 T--RCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYD 191


>gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens]
          Length = 377

 Score = 97.8 bits (242), Expect = 3e-21
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 3/120 (2%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C+ C  +I DRYLLK  +  WH  CL+C+ C   L +  S  Y K   I C+ DY   FG
Sbjct: 99  CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC-YIKNKEIFCKMDYFSRFG 157

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
               CA C + I A + V RA+ N YHL CFAC  C ++   G++F L    +LC+  Y+
Sbjct: 158 T--KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215


>gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens]
          Length = 392

 Score = 97.8 bits (242), Expect = 3e-21
 Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 3/120 (2%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C+ C  +I DRYLLK  +  WH  CL+C+ C   L +  S  Y K   I C+ DY   FG
Sbjct: 99  CSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC-YIKNKEIFCKMDYFSRFG 157

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
               CA C + I A + V RA+ N YHL CFAC  C ++   G++F L    +LC+  Y+
Sbjct: 158 T--KCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 215


>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
          Length = 746

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 9/124 (7%)

Query: 3   SVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLY-TKANLI 61
           S +  T    CAGC R IK+   L ALDK WH  C KC  C    G+V +  Y +K    
Sbjct: 156 SPKETTFSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVLTGEYISKDGAP 211

Query: 62  LCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLK 121
            C +DY  LFGV   C AC + I     V+ A D  YH  C  C  CNQ F  G++ +L+
Sbjct: 212 YCEKDYQGLFGV--KCEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQ 267

Query: 122 NNMI 125
            + +
Sbjct: 268 GSTV 271



 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 6   PDTKPK-GCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCR 64
           P  KP   C  C    K   +L+   K++H  C  C  C C L + G   + K    LC 
Sbjct: 31  PSEKPVIHCHKCGEPCKGE-VLRVQTKHFHIKCFTCKVCGCDLAQGG--FFIKNGEYLCT 87

Query: 65  RDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNM 124
            DY R++G    C  C + +     V+ A    YH +CFAC +C + F  GD+       
Sbjct: 88  LDYQRMYGT--RCHGCGEFVEG--EVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRD 143

Query: 125 ILCQ 128
            LCQ
Sbjct: 144 CLCQ 147



 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 76  NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
           +C  C +  P    V+R +   +H+ CF C++C      G  FF+KN   LC  DY+
Sbjct: 38  HCHKCGE--PCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGG-FFIKNGEYLCTLDYQ 91


>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
          Length = 718

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 9/124 (7%)

Query: 3   SVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLY-TKANLI 61
           S +  T    CAGC R IK+   L ALDK WH  C KC  C    G+V +  Y +K    
Sbjct: 156 SPKETTFSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVLTGEYISKDGAP 211

Query: 62  LCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLK 121
            C +DY  LFGV   C AC + I     V+ A D  YH  C  C  CNQ F  G++ +L+
Sbjct: 212 YCEKDYQGLFGV--KCEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQ 267

Query: 122 NNMI 125
            + +
Sbjct: 268 GSTV 271



 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 6   PDTKPK-GCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCR 64
           P  KP   C  C    K   +L+   K++H  C  C  C C L + G   + K    LC 
Sbjct: 31  PSEKPVIHCHKCGEPCKGE-VLRVQTKHFHIKCFTCKVCGCDLAQGG--FFIKNGEYLCT 87

Query: 65  RDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNM 124
            DY R++G    C  C + +     V+ A    YH +CFAC +C + F  GD+       
Sbjct: 88  LDYQRMYGT--RCHGCGEFVEG--EVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRD 143

Query: 125 ILCQ 128
            LCQ
Sbjct: 144 CLCQ 147



 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 76  NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
           +C  C +  P    V+R +   +H+ CF C++C      G  FF+KN   LC  DY+
Sbjct: 38  HCHKCGE--PCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGG-FFIKNGEYLCTLDYQ 91


>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
          Length = 778

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 9/124 (7%)

Query: 3   SVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLY-TKANLI 61
           S +  T    CAGC R IK+   L ALDK WH  C KC  C    G+V +  Y +K    
Sbjct: 216 SPKETTFSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSC----GKVLTGEYISKDGAP 271

Query: 62  LCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLK 121
            C +DY  LFGV   C AC + I     V+ A D  YH  C  C  CNQ F  G++ +L+
Sbjct: 272 YCEKDYQGLFGV--KCEACHQFITG--KVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQ 327

Query: 122 NNMI 125
            + +
Sbjct: 328 GSTV 331



 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 6   PDTKPK-GCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCR 64
           P  KP   C  C    K   +L+   K++H  C  C  C C L + G   + K    LC 
Sbjct: 91  PSEKPVIHCHKCGEPCKGE-VLRVQTKHFHIKCFTCKVCGCDLAQGG--FFIKNGEYLCT 147

Query: 65  RDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNM 124
            DY R++G    C  C + +     V+ A    YH +CFAC +C + F  GD+       
Sbjct: 148 LDYQRMYGT--RCHGCGEFVEG--EVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRD 203

Query: 125 ILCQ 128
            LCQ
Sbjct: 204 CLCQ 207



 Score = 40.4 bits (93), Expect = 5e-04
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 76  NCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQTDYE 132
           +C  C +  P    V+R +   +H+ CF C++C      G  FF+KN   LC  DY+
Sbjct: 98  HCHKCGE--PCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGG-FFIKNGEYLCTLDYQ 151


>gi|194272207 actin binding LIM protein family, member 2 isoform 7
           [Homo sapiens]
          Length = 470

 Score = 74.3 bits (181), Expect = 3e-14
 Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 11  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 70
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 71  FGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 125
           FG+   C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 128
               C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|153792514 actin binding LIM protein family, member 2 isoform 6
           [Homo sapiens]
          Length = 521

 Score = 74.3 bits (181), Expect = 3e-14
 Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 11  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 70
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 71  FGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 125
           FG+   C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 128
               C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|194272204 actin binding LIM protein family, member 2 isoform 5
           [Homo sapiens]
          Length = 531

 Score = 74.3 bits (181), Expect = 3e-14
 Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 11  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 70
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 71  FGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 125
           FG+   C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 128
               C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|194272202 actin binding LIM protein family, member 2 isoform 4
           [Homo sapiens]
          Length = 559

 Score = 74.3 bits (181), Expect = 3e-14
 Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 11  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 70
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 71  FGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 125
           FG+   C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 128
               C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


>gi|194272200 actin binding LIM protein family, member 2 isoform 3
           [Homo sapiens]
          Length = 572

 Score = 74.3 bits (181), Expect = 3e-14
 Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 11  KGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL 70
           + C GC  +IK+   L ALDK+WH  C KC  C   L    +   +K  L  C  DY   
Sbjct: 151 RSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLL---NAEYISKDGLPYCEADYHAK 207

Query: 71  FGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMI 125
           FG+   C +C K I     V+ A +  YH  C  C  C Q F  G++ +L+ + I
Sbjct: 208 FGI--RCDSCEKYITG--RVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSI 258



 Score = 68.9 bits (167), Expect = 1e-12
 Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 13  CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
           C  C    K   +L+  DKY+H  C  C  C C L E G   + +    +C  DY RL+G
Sbjct: 24  CNTCGNVCKGE-VLRVQDKYFHIKCFVCKACGCDLAEGG--FFVRQGEYICTLDYQRLYG 80

Query: 73  VTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQ 128
               C +C + I     V+ A    YH DCF C +C   F  GD+        +CQ
Sbjct: 81  T--RCFSCDQFIEG--EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQ 132


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.142    0.480 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,790,609
Number of Sequences: 37866
Number of extensions: 253062
Number of successful extensions: 1306
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 840
Number of HSP's gapped (non-prelim): 265
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.