Search of human proteins with 4759300

Search of human proteins with 4759300

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens]
         (100 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens]       199   4e-52
gi|172072620 vesicle-associated membrane protein 2 (synaptobrevi...   140   2e-34
gi|7657673 vesicle-associated membrane protein 1 isoform 1 [Homo...   140   3e-34
gi|40549446 vesicle-associated membrane protein 1 isoform 2 [Hom...   138   1e-33
gi|9257251 vesicle-associated membrane protein 1 isoform 3 [Homo...   138   1e-33
gi|42544207 vesicle-associated membrane protein 4 [Homo sapiens]       85   1e-17
gi|14043026 vesicle-associated membrane protein 8 [Homo sapiens]       71   2e-13
gi|5730112 vesicle-associated membrane protein 5 [Homo sapiens]        61   2e-10
gi|223468574 vesicle-associated membrane protein 7 isoform 2 [Ho...    54   2e-08
gi|5032137 vesicle-associated membrane protein 7 isoform 1 [Homo...    54   2e-08
gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo sa...    39   0.001
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li...    32   0.083
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]            32   0.11 
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap...    30   0.31 
gi|5730120 YKT6 v-SNARE protein [Homo sapiens]                         30   0.54 
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s...    29   0.70 
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa...    29   0.70 
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li...    28   1.6  
gi|4504367 HESX homeobox 1 [Homo sapiens]                              28   2.0  
gi|33620763 sno, strawberry notch homolog 1 [Homo sapiens]             28   2.0  
gi|221554526 coiled-coil domain containing 42B [Homo sapiens]          27   2.7  
gi|51479177 iroquois homeobox protein 1 [Homo sapiens]                 27   2.7  
gi|223972648 t-SNARE domain containing 1 [Homo sapiens]                27   2.7  
gi|149363700 syntaxin binding protein 5-like [Homo sapiens]            27   3.5  
gi|47778943 syntaxin 16 isoform a [Homo sapiens]                       27   4.5  
gi|5032131 syntaxin 6 [Homo sapiens]                                   27   4.5  
gi|198041692 syntaxin 16 isoform d [Homo sapiens]                      27   4.5  
gi|198041688 syntaxin 16 isoform c [Homo sapiens]                      27   4.5  
gi|34447229 syntaxin 16 isoform b [Homo sapiens]                       27   4.5  
gi|42794779 myosin 18A isoform b [Homo sapiens]                        26   5.9  

>gi|4759300 vesicle-associated membrane protein 3 [Homo sapiens]
          Length = 100

 Score =  199 bits (506), Expect = 4e-52
 Identities = 100/100 (100%), Positives = 100/100 (100%)

Query: 1   MSTGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQF 60
           MSTGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQF
Sbjct: 1   MSTGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQF 60

Query: 61  ETSAAKLKRKYWWKNCKMWAIGITVLVIFIIIIIVWVVSS 100
           ETSAAKLKRKYWWKNCKMWAIGITVLVIFIIIIIVWVVSS
Sbjct: 61  ETSAAKLKRKYWWKNCKMWAIGITVLVIFIIIIIVWVVSS 100


>gi|172072620 vesicle-associated membrane protein 2 (synaptobrevin
           2) [Homo sapiens]
          Length = 116

 Score =  140 bits (354), Expect = 2e-34
 Identities = 73/86 (84%), Positives = 76/86 (88%)

Query: 11  SNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRK 70
           SNRRLQQTQ QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRK
Sbjct: 28  SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRK 87

Query: 71  YWWKNCKMWAIGITVLVIFIIIIIVW 96
           YWWKN KM  I   +  I +IIIIV+
Sbjct: 88  YWWKNLKMMIILGVICAIILIIIIVY 113


>gi|7657673 vesicle-associated membrane protein 1 isoform 1 [Homo
           sapiens]
          Length = 118

 Score =  140 bits (352), Expect = 3e-34
 Identities = 68/93 (73%), Positives = 79/93 (84%)

Query: 4   GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
           GP     SNRRLQQTQ QV+EVVDI+RVNVDKVLERDQKLSELDDRADALQAGASQFE+S
Sbjct: 23  GPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESS 82

Query: 64  AAKLKRKYWWKNCKMWAIGITVLVIFIIIIIVW 96
           AAKLKRKYWWKNCKM  +   +  I +++I+++
Sbjct: 83  AAKLKRKYWWKNCKMMIMLGAICAIIVVVIVIY 115


>gi|40549446 vesicle-associated membrane protein 1 isoform 2 [Homo
           sapiens]
          Length = 117

 Score =  138 bits (347), Expect = 1e-33
 Identities = 68/91 (74%), Positives = 77/91 (84%)

Query: 4   GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
           GP     SNRRLQQTQ QV+EVVDI+RVNVDKVLERDQKLSELDDRADALQAGASQFE+S
Sbjct: 23  GPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESS 82

Query: 64  AAKLKRKYWWKNCKMWAIGITVLVIFIIIII 94
           AAKLKRKYWWKNCKM  +   +  I +++I+
Sbjct: 83  AAKLKRKYWWKNCKMMIMLGAICAIIVVVIV 113


>gi|9257251 vesicle-associated membrane protein 1 isoform 3 [Homo
           sapiens]
          Length = 116

 Score =  138 bits (347), Expect = 1e-33
 Identities = 68/91 (74%), Positives = 77/91 (84%)

Query: 4   GPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETS 63
           GP     SNRRLQQTQ QV+EVVDI+RVNVDKVLERDQKLSELDDRADALQAGASQFE+S
Sbjct: 23  GPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESS 82

Query: 64  AAKLKRKYWWKNCKMWAIGITVLVIFIIIII 94
           AAKLKRKYWWKNCKM  +   +  I +++I+
Sbjct: 83  AAKLKRKYWWKNCKMMIMLGAICAIIVVVIV 113


>gi|42544207 vesicle-associated membrane protein 4 [Homo sapiens]
          Length = 141

 Score = 85.1 bits (209), Expect = 1e-17
 Identities = 35/87 (40%), Positives = 61/87 (70%)

Query: 12  NRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKY 71
           N +++  QNQVDEV+D+M+ N+ KV+ER ++L EL D++++L   A+ F   + +L+R+ 
Sbjct: 50  NDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQM 109

Query: 72  WWKNCKMWAIGITVLVIFIIIIIVWVV 98
           WW+ CK+ AI   V  I +++II+ +V
Sbjct: 110 WWRGCKIKAIMALVAAILLLVIIILIV 136


>gi|14043026 vesicle-associated membrane protein 8 [Homo sapiens]
          Length = 100

 Score = 70.9 bits (172), Expect = 2e-13
 Identities = 32/86 (37%), Positives = 58/86 (67%), Gaps = 2/86 (2%)

Query: 10 GSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKR 69
          G N R++  Q++V+ V +IM  NV+++L R + L  L ++ + L+A +  F+T++ K+ R
Sbjct: 8  GGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVAR 67

Query: 70 KYWWKNCKMWAIGITVLVIFIIIIIV 95
          K+WWKN KM  I +  +++FIII+ +
Sbjct: 68 KFWWKNVKM--IVLICVIVFIIILFI 91


>gi|5730112 vesicle-associated membrane protein 5 [Homo sapiens]
          Length = 116

 Score = 60.8 bits (146), Expect = 2e-10
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 15 LQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWK 74
          L++ Q Q +EV +IMR N  KVLER  KL+EL  R+D L   +S F  +   L +K  W+
Sbjct: 6  LERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWE 65

Query: 75 NCK-MWAIGITVLVIFIIIIIVWVV 98
          N +    +G+ V+ + +II+IV +V
Sbjct: 66 NIRYRICVGLVVVGVLLIILIVLLV 90


>gi|223468574 vesicle-associated membrane protein 7 isoform 2 [Homo
           sapiens]
          Length = 179

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 30/81 (37%), Positives = 48/81 (59%)

Query: 14  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73
           ++ +TQ QVDE+  IM  N+D V +R ++L  L D+ + L   +  F+T++  L R    
Sbjct: 84  KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 143

Query: 74  KNCKMWAIGITVLVIFIIIII 94
           KN K+  I I V ++FI II+
Sbjct: 144 KNLKLTIIIIIVSIVFIYIIV 164


>gi|5032137 vesicle-associated membrane protein 7 isoform 1 [Homo
           sapiens]
          Length = 220

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 30/81 (37%), Positives = 48/81 (59%)

Query: 14  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73
           ++ +TQ QVDE+  IM  N+D V +R ++L  L D+ + L   +  F+T++  L R    
Sbjct: 125 KVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCM 184

Query: 74  KNCKMWAIGITVLVIFIIIII 94
           KN K+  I I V ++FI II+
Sbjct: 185 KNLKLTIIIIIVSIVFIYIIV 205


>gi|94429050 SEC22 vesicle trafficking protein homolog B [Homo
           sapiens]
          Length = 215

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)

Query: 11  SNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRK 70
           + R L     ++ +V  IM  N+++VL+R + LS LD +A+ L + + ++   A  L   
Sbjct: 131 ARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYL--- 187

Query: 71  YWWKNCKMWAIGITVLVIFIIIIIVWV 97
               N       +  + +F I++IV+V
Sbjct: 188 ----NMHSTYAKLAAVAVFFIMLIVYV 210


>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 899

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 14/66 (21%), Positives = 36/66 (54%)

Query: 14  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73
           R+++ + ++ E  ++MR   +K+ E+++K+ E +++    +    + E    + + K W 
Sbjct: 590 RMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWE 649

Query: 74  KNCKMW 79
           +  KMW
Sbjct: 650 QEEKMW 655


>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 238

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/66 (21%), Positives = 36/66 (54%)

Query: 14 RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73
          R+++ + ++ E  ++MR   +K+ E+++K+ E +++    +    + E    + + K W 
Sbjct: 6  RMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWE 65

Query: 74 KNCKMW 79
          +  KMW
Sbjct: 66 QEEKMW 71


>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo
           sapiens]
          Length = 4486

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 16/59 (27%), Positives = 34/59 (57%), Gaps = 4/59 (6%)

Query: 13  RRLQQTQNQVDEVVDIMRVNVDKVLE----RDQKLSELDDRADALQAGASQFETSAAKL 67
           +R+Q+T++ V+E+ +IM+  V  + +    + + L  LDDR D ++   +  + S  K+
Sbjct: 802 QRIQKTKDNVEEIQNIMKTWVTPIFKTKDGKRESLLSLDDRHDRMEKYYNLIKESGLKI 860


>gi|5730120 YKT6 v-SNARE protein [Homo sapiens]
          Length = 198

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 14/52 (26%), Positives = 29/52 (55%)

Query: 15  LQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAK 66
           + + Q ++DE   I+   ++ +LER +KL +L  +++ L   +  F  +A K
Sbjct: 139 MTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190


>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
            sapiens]
          Length = 3118

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 14   RLQQTQNQVDEVVDIMRVNVDKVLE-------RDQKLSELDDRADALQAGASQFETS 63
            +L   +N+VD+  D++R   DK+ E         + ++ L+ + +A+++G  Q E +
Sbjct: 1775 KLADYKNKVDDAWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIENT 1831


>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
            sapiens]
          Length = 3122

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 14   RLQQTQNQVDEVVDIMRVNVDKVLE-------RDQKLSELDDRADALQAGASQFETS 63
            +L   +N+VD+  D++R   DK+ E         + ++ L+ + +A+++G  Q E +
Sbjct: 1775 KLADYKNKVDDAWDLLREATDKIREANRLFAVNQKNMTALEKKKEAVESGKRQIENT 1831


>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 828

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 14/66 (21%), Positives = 35/66 (53%), Gaps = 7/66 (10%)

Query: 14  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73
           R+++ + ++ E  ++MR   +K+ E+++K+ E +++         + E    + + K W 
Sbjct: 561 RMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKM-------WEQEEKMQEQEEKMWE 613

Query: 74  KNCKMW 79
           +  KMW
Sbjct: 614 QEEKMW 619



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/66 (18%), Positives = 32/66 (48%)

Query: 14  RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 73
           ++ + + ++ E  + MR   +K+  +++K+ E +++    +    + E      + K W 
Sbjct: 647 KMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWG 706

Query: 74  KNCKMW 79
           +  KMW
Sbjct: 707 QEEKMW 712


>gi|4504367 HESX homeobox 1 [Homo sapiens]
          Length = 185

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 10/66 (15%)

Query: 10  GSNRRLQQTQNQVDEVVDIMRVN----VDKVLERDQKLSELDDRADALQAGASQFETSAA 65
           G   R   TQNQ++ + ++ RVN    +D   +  QKL+  +DR          F+   A
Sbjct: 108 GRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQI------WFQNRRA 161

Query: 66  KLKRKY 71
           KLKR +
Sbjct: 162 KLKRSH 167


>gi|33620763 sno, strawberry notch homolog 1 [Homo sapiens]
          Length = 1392

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 51   DALQAGASQFETSAAKLKRKYWWKNCKMWAIGI 83
            DAL     Q+ +SA      YW  NCK  ++G+
Sbjct: 1260 DALMHWLDQYNSSADTCTHAYWRGNCKKASLGL 1292


>gi|221554526 coiled-coil domain containing 42B [Homo sapiens]
          Length = 308

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 32 NVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKY 71
          +V  VL   +K  EL D   ALQA    F T  A LK+++
Sbjct: 28 HVPPVLRLLEKRQELVDADQALQAQKEVFRTKTAALKQRW 67


>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
          Length = 480

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 7   AATGSNRRLQQTQNQVDEVVDIMRVNVDKVLER--DQKLSELDDRADALQAGAS 58
           A  GS+      + + DE +D+  +++DK+ E   DQ   + +D+A+A  A A+
Sbjct: 204 ALFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQSNEDDEDKAEAPHAPAA 257


>gi|223972648 t-SNARE domain containing 1 [Homo sapiens]
          Length = 513

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 33  VDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAIGITVLVIFIII 92
           VD +    +  S   + A  L AGAS+ +    K+K       C   + G+T L++ III
Sbjct: 454 VDSIEASLEAASSHAEAARQLLAGASRHQLQRHKIK-------CCFLSAGVTALLVIIII 506

Query: 93  I 93
           I
Sbjct: 507 I 507


>gi|149363700 syntaxin binding protein 5-like [Homo sapiens]
          Length = 1186

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 38   ERDQKLSELDDRADALQAGASQFETSAAKLKRKY 71
            ER Q+L EL+++   +   A  F   A +L  KY
Sbjct: 1145 ERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKY 1178


>gi|47778943 syntaxin 16 isoform a [Homo sapiens]
          Length = 325

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 13  RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKR--K 70
           R ++Q    + ++ +I R     ++E+   L  +D     ++    + E    +L +  +
Sbjct: 238 REIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN---VEQSCIKTEDGLKQLHKAEQ 294

Query: 71  YWWKNCKMWAIGITVLVIFIIIIIVWVV 98
           Y  KN KM    + +L++F+III++ VV
Sbjct: 295 YQKKNRKM----LVILILFVIIIVLIVV 318


>gi|5032131 syntaxin 6 [Homo sapiens]
          Length = 255

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 19/98 (19%), Positives = 49/98 (50%), Gaps = 21/98 (21%)

Query: 16  QQTQNQV-----DEVVDIMRVNVDKVLERDQKLS-ELDDRADALQAGASQFETSAAKLK- 68
           QQ Q Q+     DE ++++  ++  +    Q++  EL+++A  L+  + + E++ ++L  
Sbjct: 158 QQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDN 217

Query: 69  --------------RKYWWKNCKMWAIGITVLVIFIII 92
                         R+ W     ++A+ + VL++F+++
Sbjct: 218 VMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLILFLVL 255


>gi|198041692 syntaxin 16 isoform d [Homo sapiens]
          Length = 308

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 13  RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKR--K 70
           R ++Q    + ++ +I R     ++E+   L  +D     ++    + E    +L +  +
Sbjct: 221 REIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN---VEQSCIKTEDGLKQLHKAEQ 277

Query: 71  YWWKNCKMWAIGITVLVIFIIIIIVWVV 98
           Y  KN KM    + +L++F+III++ VV
Sbjct: 278 YQKKNRKM----LVILILFVIIIVLIVV 301


>gi|198041688 syntaxin 16 isoform c [Homo sapiens]
          Length = 321

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 13  RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKR--K 70
           R ++Q    + ++ +I R     ++E+   L  +D     ++    + E    +L +  +
Sbjct: 234 REIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN---VEQSCIKTEDGLKQLHKAEQ 290

Query: 71  YWWKNCKMWAIGITVLVIFIIIIIVWVV 98
           Y  KN KM    + +L++F+III++ VV
Sbjct: 291 YQKKNRKM----LVILILFVIIIVLIVV 314


>gi|34447229 syntaxin 16 isoform b [Homo sapiens]
          Length = 304

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 13  RRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKR--K 70
           R ++Q    + ++ +I R     ++E+   L  +D     ++    + E    +L +  +
Sbjct: 217 REIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYN---VEQSCIKTEDGLKQLHKAEQ 273

Query: 71  YWWKNCKMWAIGITVLVIFIIIIIVWVV 98
           Y  KN KM    + +L++F+III++ VV
Sbjct: 274 YQKKNRKM----LVILILFVIIIVLIVV 297


>gi|42794779 myosin 18A isoform b [Homo sapiens]
          Length = 2039

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 14   RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLK 68
            +LQ  Q+QV E ++   V+   V  ++ K+ EL+ R +  +    + E+ A++LK
Sbjct: 1796 KLQALQSQV-EFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLK 1849


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.130    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,982,653
Number of Sequences: 37866
Number of extensions: 84802
Number of successful extensions: 576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 45
length of query: 100
length of database: 18,247,518
effective HSP length: 71
effective length of query: 29
effective length of database: 15,559,032
effective search space: 451211928
effective search space used: 451211928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.