YKT6 33411

Name: YKT6	Sequence: fasta or formatted (198aa)		NCBI GI: 5730120
Description: YKT6 v-SNARE protein		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 14 2 C cysteine 1.5 3 2 D aspartate 6.1 12 2 E glutamate 7.1 14 1 F phenylalanine 4.0 8 2 G glycine 3.5 7 1 H histidine 2.0 4 1 I isoleucine 3.5 7 2 K lysine 7.6 15 1 L leucine 10.1 20 2 M methionine 2.5 5 1 N asparagine 2.5 5 1 P proline 3.0 6 1 Q glutamine 4.5 9 1 R arginine 5.1 10 1 S serine 10.6 21 2 T threonine 5.1 10 1 V valine 9.1 18 2 W tryptophan 0.5 1 1 Y tyrosine 4.5 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 YKT6 v-SNARE protein VAMP7 0.088 vesicle-associated membrane protein 7 isoform 1 [Homo... SEC22B 0.052 SEC22 vesicle trafficking protein homolog B VAMP7 0.041 vesicle-associated membrane protein 7 isoform 2 [Ho... VAMP4 0.038 vesicle-associated membrane protein 4 VAMP8 0.033 vesicle-associated membrane protein 8 XPO6 0.025 exportin 6 VAMP2 0.019 vesicle-associated membrane protein 2 (synaptobrevi... VAMP1 0.016 vesicle-associated membrane protein 1 isoform 2 [Hom... VAMP1 0.016 vesicle-associated membrane protein 1 isoform 1 [Homo... VAMP1 0.016 vesicle-associated membrane protein 1 isoform 3 [Homo... CCDC66 0.014 coiled-coil domain containing 66 isoform 1 CCDC66 0.014 coiled-coil domain containing 66 isoform 2 VAMP3 0.014 vesicle-associated membrane protein 3 LOC100131897 0.011 hypothetical protein LOC100131897 SF3B5 0.011 SF3b10 TEX14 0.008 testis expressed sequence 14 isoform a TEX14 0.008 testis expressed sequence 14 isoform b ARHGAP27 0.008 Rho GTPase activating protein 27 isoform b ARHGAP27 0.008 Rho GTPase activating protein 27 isoform a MNS1 0.008 meiosis-specific nuclear structural 1 MCOLN2 0.008 mucolipin 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.