TSNARE1 14795

Name: TSNARE1	Sequence: fasta or formatted (513aa)		NCBI GI: 223972648
Description: t-SNARE domain containing 1		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 49 2 C cysteine 2.5 13 2 D aspartate 3.9 20 2 E glutamate 6.8 35 2 F phenylalanine 2.1 11 1 G glycine 7.4 38 3 H histidine 1.9 10 2 I isoleucine 4.1 21 5 K lysine 5.5 28 2 L leucine 9.7 50 2 M methionine 1.8 9 1 N asparagine 2.1 11 1 P proline 6.8 35 2 Q glutamine 7.0 36 2 R arginine 8.0 41 2 S serine 9.2 47 2 T threonine 4.3 22 2 V valine 5.5 28 2 W tryptophan 0.8 4 1 Y tyrosine 1.0 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 t-SNARE domain containing 1 STX7 0.113 syntaxin 7 STX12 0.111 syntaxin 12 NAIF1 0.043 nuclear apoptosis inducing factor 1 STX2 0.036 syntaxin 2 isoform 2 STX2 0.033 syntaxin 2 isoform 1 MYPOP 0.030 Myb protein P42POP STX1A 0.028 syntaxin 1A (brain) STX3 0.028 syntaxin 3 STX16 0.027 syntaxin 16 isoform a STX16 0.027 syntaxin 16 isoform d STX16 0.027 syntaxin 16 isoform c STX16 0.027 syntaxin 16 isoform b KIAA1826 0.027 hypothetical protein LOC84437 STX1B 0.026 syntaxin 1B TPM2 0.025 tropomyosin 2 (beta) isoform 2 STX4 0.024 syntaxin 4 TPM1 0.024 tropomyosin 1 alpha chain isoform 4 TPM1 0.024 tropomyosin 1 alpha chain isoform 5 TPM1 0.022 tropomyosin 1 alpha chain isoform 6 TPM1 0.022 tropomyosin 1 alpha chain isoform 1 TPM1 0.022 tropomyosin 1 alpha chain isoform 3 TPM1 0.020 tropomyosin 1 alpha chain isoform 7 TPM3 0.020 tropomyosin 3 isoform 1 TPM2 0.019 tropomyosin 2 (beta) isoform 1 RABEP2 0.019 rabaptin, RAB GTPase binding effector protein 2 [Ho... TPM4 0.019 tropomyosin 4 isoform 1 TPM1 0.019 tropomyosin 1 alpha chain isoform 2 TRIP11 0.018 thyroid hormone receptor interactor 11 TPR 0.017 nuclear pore complex-associated protein TPR Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.