Search of human proteins with 4758256

Search of human proteins with 4758256

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758256 eukaryotic translation initiation factor 2, subunit
1 alpha, 35kDa [Homo sapiens]
         (315 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758256 eukaryotic translation initiation factor 2, subunit 1...   619   e-177
gi|30794372 polybromo 1 isoform 1 [Homo sapiens]                       36   0.051
gi|93102371 polybromo 1 isoform 2 [Homo sapiens]                       36   0.051
gi|41281917 polybromo 1 isoform 4 [Homo sapiens]                       36   0.051
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     33   0.43 
gi|16262452 cingulin [Homo sapiens]                                    33   0.43 
gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens]        31   1.6  
gi|149363685 hypothetical protein LOC23379 [Homo sapiens]              30   2.8  
gi|118421089 chromodomain helicase DNA binding protein 2 isoform...    30   2.8  
gi|71725367 primary ciliary dyskinesia protein 1 [Homo sapiens]        30   3.6  
gi|23510289 sphingosine-1-phosphate phosphotase 2 [Homo sapiens]       29   4.8  
gi|70980549 programmed cell death 11 [Homo sapiens]                    29   4.8  
gi|17402888 neuronal pentraxin receptor [Homo sapiens]                 29   6.2  
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]       29   6.2  
gi|50726968 microfibrillar-associated protein 1 [Homo sapiens]         29   6.2  
gi|170784865 CAS1 domain containing 1 [Homo sapiens]                   29   6.2  
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             29   6.2  
gi|41406057 amyloid beta A4 protein isoform c precursor [Homo sa...    28   8.1  
gi|41406055 amyloid beta A4 protein isoform b precursor [Homo sa...    28   8.1  
gi|4502167 amyloid beta A4 protein isoform a precursor [Homo sap...    28   8.1  
gi|209915570 amyloid beta A4 protein isoform e precursor [Homo s...    28   8.1  
gi|209915573 amyloid beta A4 protein isoform f precursor [Homo s...    28   8.1  
gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens]              28   8.1  
gi|46255062 synaptotagmin-like 2 isoform c [Homo sapiens]              28   8.1  
gi|14249342 internexin neuronal intermediate filament protein, a...    28   8.1  
gi|156616279 inosine monophosphate dehydrogenase 1 isoform c [Ho...    28   8.1  
gi|34328928 inosine monophosphate dehydrogenase 1 isoform b [Hom...    28   8.1  
gi|34328930 inosine monophosphate dehydrogenase 1 isoform a [Hom...    28   8.1  
gi|217035152 inosine monophosphate dehydrogenase 1 isoform d [Ho...    28   8.1  
gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Ho...    28   8.1  

>gi|4758256 eukaryotic translation initiation factor 2, subunit 1
           alpha, 35kDa [Homo sapiens]
          Length = 315

 Score =  619 bits (1595), Expect = e-177
 Identities = 315/315 (100%), Positives = 315/315 (100%)

Query: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
           MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60

Query: 61  KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120
           KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE
Sbjct: 61  KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120

Query: 121 YTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNI 180
           YTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNI
Sbjct: 121 YTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNI 180

Query: 181 NRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTT 240
           NRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTT
Sbjct: 181 NRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTT 240

Query: 241 TLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEV 300
           TLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEV
Sbjct: 241 TLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEV 300

Query: 301 DGDDDAEEMEAKAED 315
           DGDDDAEEMEAKAED
Sbjct: 301 DGDDDAEEMEAKAED 315


>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
          Length = 1602

 Score = 35.8 bits (81), Expect = 0.051
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 216  LNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEP 275
            L+C    +P    L+   RY  +   +++ +GL   S +  V+ ++I   R     Q EP
Sbjct: 1210 LSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEP 1269

Query: 276  KVVTDTDETELARQMERLERENAEVD-GDDDAEEM 309
              +       L ++++ LE + AE++ GDDD EEM
Sbjct: 1270 SPL-------LEKKIQLLEAKFAELEGGDDDIEEM 1297


>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
          Length = 1582

 Score = 35.8 bits (81), Expect = 0.051
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 216  LNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEP 275
            L+C    +P    L+   RY  +   +++ +GL   S +  V+ ++I   R     Q EP
Sbjct: 1217 LSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEP 1276

Query: 276  KVVTDTDETELARQMERLERENAEVD-GDDDAEEM 309
              +       L ++++ LE + AE++ GDDD EEM
Sbjct: 1277 SPL-------LEKKIQLLEAKFAELEGGDDDIEEM 1304


>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
          Length = 1582

 Score = 35.8 bits (81), Expect = 0.051
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 216  LNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEP 275
            L+C    +P    L+   RY  +   +++ +GL   S +  V+ ++I   R     Q EP
Sbjct: 1242 LSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEP 1301

Query: 276  KVVTDTDETELARQMERLERENAEVD-GDDDAEEM 309
              +       L ++++ LE + AE++ GDDD EEM
Sbjct: 1302 SPL-------LEKKIQLLEAKFAELEGGDDDIEEM 1329


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 27/129 (20%)

Query: 189 VKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGL 248
           VK+  DIE+A Y           L  G  C     PI  +L                EGL
Sbjct: 391 VKMALDIEIAAY---------RKLLEGEECRIGFGPIPFSL---------------PEGL 426

Query: 249 SVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTD--TDETELARQM-ERLERENAEVDGDDD 305
             +      IK K EEK  V     +  V+ +  T+ET++  ++ E  E+E  E +G ++
Sbjct: 427 PKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEE 486

Query: 306 AEEMEAKAE 314
               E +AE
Sbjct: 487 EGGEEEEAE 495


>gi|16262452 cingulin [Homo sapiens]
          Length = 1203

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 205 IDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEE 264
           ++A K+ L   LN S E        +A  +  +     E   GL+ L Q    +   +EE
Sbjct: 770 LEAEKQQLEEALNASQEEE----GSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEE 825

Query: 265 KRGVFNVQMEPKVVTDTDETELARQMERLERENAEV--DGDDDAEEMEAKAED 315
           +     V    K   +  +  L R ++RL +E  ++  D     ++++A+ ED
Sbjct: 826 EGKQREVLRRGKAELEEQKRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLED 878


>gi|48255877 troponin T type 2, cardiac isoform 1 [Homo sapiens]
          Length = 295

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 251 LSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQME-RLERENAEVDGDDDAEEM 309
           +S    V++E  EE++    V+ E     D DE E A + +   E E  E   ++D EE 
Sbjct: 1   MSDIEEVVEEYEEEEQEEAAVEEEEDWREDEDEQEEAAEEDAEAEAETEETRAEEDEEEE 60

Query: 310 EAK-AED 315
           EAK AED
Sbjct: 61  EAKEAED 67


>gi|149363685 hypothetical protein LOC23379 [Homo sapiens]
          Length = 2266

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 2/106 (1%)

Query: 210 EALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVF 269
           E L A      E  P K  L + P        L  +EG +VLS+ M   K +  +   + 
Sbjct: 511 ERLSASPAQEKEAAPGKSELCSSPLGKRPLNELMESEGKTVLSKMMGSPKSEFTKWTRIN 570

Query: 270 NVQMEPKVVTDTDETELARQMERLERENAEVDGDDDAEEMEAKAED 315
            +  EP  +T +      R    LE+E  +  G    E  E++ +D
Sbjct: 571 EITSEPDRITVSG--HFHRLSRELEKEKEDTQGFTLGESPESEDDD 614


>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
            [Homo sapiens]
          Length = 1828

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 12/78 (15%)

Query: 77   DKEKGYIDLSKRRVSP-EEAIKCEDKFTKSKTVYSILRH-----------VAEVLEYTKD 124
            D ++    + K R+ P ++A+K  DK  K   V   L H           +AE L+   D
Sbjct: 1463 DLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYSD 1522

Query: 125  EQLESLFQRTAWVFDDKY 142
            ++   L++R  W+F  K+
Sbjct: 1523 QEHIKLWRRNLWIFVSKF 1540


>gi|71725367 primary ciliary dyskinesia protein 1 [Homo sapiens]
          Length = 554

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 149 AYDAFKHAVSDPSILDSLD----LNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEG 204
           ++++F   +  P+ILD+L     L   ERE+   N+   LTP+ +K    +E     Y+ 
Sbjct: 459 SFNSFMLPIDVPAILDALPEEDRLETVERELCEQNVEVMLTPEMIK----VEFPMLNYKD 514

Query: 205 IDAVKE 210
           I   KE
Sbjct: 515 IRKEKE 520


>gi|23510289 sphingosine-1-phosphate phosphotase 2 [Homo sapiens]
          Length = 399

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/74 (27%), Positives = 30/74 (40%)

Query: 115 VAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDERE 174
           +AE+L   +D QL + FQR   +F    + P     D  + A   P +      N    E
Sbjct: 1   MAELLRSLQDSQLVARFQRRCGLFPAPDEGPRENGADPTERAARVPGVEHLPAANGKGGE 60

Query: 175 VLINNINRRLTPQA 188
              N + R   P+A
Sbjct: 61  APANGLRRAAAPEA 74


>gi|70980549 programmed cell death 11 [Homo sapiens]
          Length = 1871

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 39  YNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLS-KRRVSPEEAIK 97
           YNN++G++   ELS   I    ++   G+   VVV+  +  K  + LS K    PE   +
Sbjct: 562 YNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKE 621

Query: 98  CEDKFTKSKTVYSILRHV-AEVLEYTKD 124
                 K     +I + V  +VLE TKD
Sbjct: 622 PAGHSQKKGKAINIGQLVDVKVLEKTKD 649


>gi|17402888 neuronal pentraxin receptor [Homo sapiens]
          Length = 500

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 7/62 (11%)

Query: 206 DAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTT-----LERTEGLSVLSQAMAVIKE 260
           DAV+ ALR  ++   + +P ++NL A P  V    T     +++ EG  +L+Q +A+ KE
Sbjct: 195 DAVR-ALRDRIDRLEQELPARVNLSAAPAPVSAVPTGLHSKMDQLEG-QLLAQVLALEKE 252

Query: 261 KI 262
           ++
Sbjct: 253 RV 254


>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
          Length = 857

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 251 LSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEVDGDDDAEE 308
           + +  A+ +++  EK+ ++N+        D + T   + +  +E+ N  VD D DAE+
Sbjct: 101 MMKRFALEQQRHHEKKSIYNLN------EDEELTHYGQSLADIEKHNDIVDSDSDAED 152


>gi|50726968 microfibrillar-associated protein 1 [Homo sapiens]
          Length = 439

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 258 IKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEVDGDDDAEEME 310
           I E +EE+       +EP+VV ++D +E+     R+ERE++  + +++ ++ E
Sbjct: 93  ISEDVEERLARHRKIVEPEVVGESD-SEVEGDAWRMEREDSSEEEEEEIDDEE 144


>gi|170784865 CAS1 domain containing 1 [Homo sapiens]
          Length = 797

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 203 EGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGL 248
           E IDA  EA  + LN ST N    + + +  + +   T +E  +GL
Sbjct: 227 EKIDAYNEAAVSILNSSTRNSKSNVKMFSVSKLIAQETIMESLDGL 272


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/59 (20%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 260 EKIEEKRGVFNVQMEPKVVTDTD---ETELARQMERLERENAEVDGDDDAEEMEAKAED 315
           ++++EK G+   Q  P+ + + +   E E  +++E+ + +  E + + D E  + K ++
Sbjct: 486 KRLDEKLGILEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKE 544


>gi|41406057 amyloid beta A4 protein isoform c precursor [Homo
           sapiens]
          Length = 695

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 274 EPKVVTDTDETELARQMERLERENAEVDGDD-DAEEMEAKAED 315
           E KVV   +E E+A     +E E A+ D DD D +E+E +AE+
Sbjct: 222 EDKVVEVAEEEEVAE----VEEEEADDDEDDEDGDEVEEEAEE 260


>gi|41406055 amyloid beta A4 protein isoform b precursor [Homo
           sapiens]
          Length = 751

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 274 EPKVVTDTDETELARQMERLERENAEVDGDD-DAEEMEAKAED 315
           E KVV   +E E+A     +E E A+ D DD D +E+E +AE+
Sbjct: 222 EDKVVEVAEEEEVAE----VEEEEADDDEDDEDGDEVEEEAEE 260


>gi|4502167 amyloid beta A4 protein isoform a precursor [Homo
           sapiens]
          Length = 770

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 274 EPKVVTDTDETELARQMERLERENAEVDGDD-DAEEMEAKAED 315
           E KVV   +E E+A     +E E A+ D DD D +E+E +AE+
Sbjct: 222 EDKVVEVAEEEEVAE----VEEEEADDDEDDEDGDEVEEEAEE 260


>gi|209915570 amyloid beta A4 protein isoform e precursor [Homo
           sapiens]
          Length = 639

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 274 EPKVVTDTDETELARQMERLERENAEVDGDD-DAEEMEAKAED 315
           E KVV   +E E+A     +E E A+ D DD D +E+E +AE+
Sbjct: 166 EDKVVEVAEEEEVAE----VEEEEADDDEDDEDGDEVEEEAEE 204


>gi|209915573 amyloid beta A4 protein isoform f precursor [Homo
           sapiens]
          Length = 714

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 5/43 (11%)

Query: 274 EPKVVTDTDETELARQMERLERENAEVDGDD-DAEEMEAKAED 315
           E KVV   +E E+A     +E E A+ D DD D +E+E +AE+
Sbjct: 166 EDKVVEVAEEEEVAE----VEEEEADDDEDDEDGDEVEEEAEE 204


>gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens]
          Length = 1256

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVV 278
           ST+   +++ L +P    M     E  EG S    +        E  R   + + EP  V
Sbjct: 761 STKTSKVELTLASP---YMKQEKEEEKEGFSESDFSDGNTSSNAESWRNPSSSEEEPSPV 817

Query: 279 TDTDETELARQMERLERENAEVDG------DDDAEEMEAKAED 315
             T E   AR+M     E+   D       D+  EE+   AED
Sbjct: 818 LKTLERSAARKMPSKSLEDISSDSSNQAKVDNQPEELVRSAED 860


>gi|46255062 synaptotagmin-like 2 isoform c [Homo sapiens]
          Length = 1272

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVV 278
           ST+   +++ L +P    M     E  EG S    +        E  R   + + EP  V
Sbjct: 761 STKTSKVELTLASP---YMKQEKEEEKEGFSESDFSDGNTSSNAESWRNPSSSEEEPSPV 817

Query: 279 TDTDETELARQMERLERENAEVDG------DDDAEEMEAKAED 315
             T E   AR+M     E+   D       D+  EE+   AED
Sbjct: 818 LKTLERSAARKMPSKSLEDISSDSSNQAKVDNQPEELVRSAED 860


>gi|14249342 internexin neuronal intermediate filament protein,
           alpha [Homo sapiens]
          Length = 499

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/78 (26%), Positives = 34/78 (43%)

Query: 189 VKIRADIEVACYGYEGIDAVKEALRAGLNCSTENMPIKINLIAPPRYVMTTTTLERTEGL 248
           VK+  DIE+A Y             +GL+ S  N     + + PPR +  TT+   + GL
Sbjct: 385 VKMALDIEIAAYRKLLEGEETRFSTSGLSISGLNPLPNPSYLLPPRILSATTSKVSSTGL 444

Query: 249 SVLSQAMAVIKEKIEEKR 266
           S+  +       K+  K+
Sbjct: 445 SLKKEEEEEEASKVASKK 462


>gi|156616279 inosine monophosphate dehydrogenase 1 isoform c [Homo
           sapiens]
          Length = 589

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 139 DDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVA 198
           DDKY+       D    A  D  +LDS   N   +  +++ I ++  P    I  ++  A
Sbjct: 330 DDKYR------LDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTA 382

Query: 199 CYGYEGIDAVKEALRAGLNCST 220
                 IDA  + LR G+ C +
Sbjct: 383 AQAKNLIDAGVDGLRVGMGCGS 404


>gi|34328928 inosine monophosphate dehydrogenase 1 isoform b [Homo
           sapiens]
          Length = 563

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 139 DDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVA 198
           DDKY+       D    A  D  +LDS   N   +  +++ I ++  P    I  ++  A
Sbjct: 304 DDKYR------LDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTA 356

Query: 199 CYGYEGIDAVKEALRAGLNCST 220
                 IDA  + LR G+ C +
Sbjct: 357 AQAKNLIDAGVDGLRVGMGCGS 378


>gi|34328930 inosine monophosphate dehydrogenase 1 isoform a [Homo
           sapiens]
          Length = 599

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 139 DDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVA 198
           DDKY+       D    A  D  +LDS   N   +  +++ I ++  P    I  ++  A
Sbjct: 340 DDKYR------LDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTA 392

Query: 199 CYGYEGIDAVKEALRAGLNCST 220
                 IDA  + LR G+ C +
Sbjct: 393 AQAKNLIDAGVDGLRVGMGCGS 414


>gi|217035152 inosine monophosphate dehydrogenase 1 isoform d [Homo
           sapiens]
          Length = 566

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 139 DDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVA 198
           DDKY+       D    A  D  +LDS   N   +  +++ I ++  P    I  ++  A
Sbjct: 307 DDKYR------LDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTA 359

Query: 199 CYGYEGIDAVKEALRAGLNCST 220
                 IDA  + LR G+ C +
Sbjct: 360 AQAKNLIDAGVDGLRVGMGCGS 381


>gi|217035150 inosine monophosphate dehydrogenase 1 isoform g [Homo
           sapiens]
          Length = 489

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 139 DDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVA 198
           DDKY+       D    A  D  +LDS   N   +  +++ I ++  P    I  ++  A
Sbjct: 230 DDKYR------LDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTA 282

Query: 199 CYGYEGIDAVKEALRAGLNCST 220
                 IDA  + LR G+ C +
Sbjct: 283 AQAKNLIDAGVDGLRVGMGCGS 304


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,511,839
Number of Sequences: 37866
Number of extensions: 407691
Number of successful extensions: 1671
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1663
Number of HSP's gapped (non-prelim): 48
length of query: 315
length of database: 18,247,518
effective HSP length: 102
effective length of query: 213
effective length of database: 14,385,186
effective search space: 3064044618
effective search space used: 3064044618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.