Guide to the Human Genome
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Name: SGPP2 Sequence: fasta or formatted (399aa) NCBI GI: 23510289
Description:

sphingosine-1-phosphate phosphotase 2

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         35           3
 C cysteine            1.5          6           1
 D aspartate           2.8         11           1
 E glutamate           3.5         14           1
 F phenylalanine       5.8         23           2
 G glycine             5.5         22           2
 H histidine           1.5          6           1
 I isoleucine          5.5         22           3
 K lysine              3.0         12           1
 L leucine            12.5         50           2
 M methionine          2.3          9           1
 N asparagine          2.5         10           1
 P proline             7.3         29           2
 Q glutamine           3.3         13           1
 R arginine            5.5         22           3
 S serine              4.8         19           2
 T threonine           6.5         26           3
 V valine             10.5         42           2
 W tryptophan          1.5          6           1
 Y tyrosine            5.5         22           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sphingosine-1-phosphate phosphotase 2 
SGPP1                 0.325   sphingosine-1-phosphate phosphatase 1 
G6PC2                 0.019   islet-specific glucose-6-phosphatase-related protein...
DOLPP1                0.018   dolichyl pyrophosphate phosphatase 1 isoform a [Homo...
G6PC                  0.015   glucose-6-phosphatase, catalytic subunit 
GPR3                  0.015   G protein-coupled receptor 3 
DPY19L3               0.014   dpy-19-like 3 
ABCC8                 0.010   ATP-binding cassette, sub-family C, member 8 
PPAPDC3               0.009   phosphatidic acid phosphatase type 2 domain contain...
HAS1                  0.008   hyaluronan synthase 1 
C11orf30              0.008   EMSY protein 
ADCY7                 0.008   adenylate cyclase 7 
NIPAL4                0.006   ichthyin protein 
HTR2B                 0.006   5-hydroxytryptamine (serotonin) receptor 2B 
LMTK3                 0.006   lemur tyrosine kinase 3 
ABCC9                 0.006   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.006   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.006   ATP-binding cassette, sub-family C, member 9 isofor...
DISP2                 0.006   dispatched B 
EIF2S1                0.005   eukaryotic translation initiation factor 2, subunit 1...
G6PC2                 0.005   islet-specific glucose-6-phosphatase-related protei...
SLC44A1               0.005   CDW92 antigen 
PPAPDC2               0.005   phosphatidic acid phosphatase type 2 domain containi...
DUS3L                 0.005   dihydrouridine synthase 3-like isoform 1 
MRGPRX4               0.005   MAS-related GPR, member X4 
TMEM8A                0.005   transmembrane protein 8 (five membrane-spanning dom...
DUS3L                 0.005   dihydrouridine synthase 3-like isoform 2 
MAGI2                 0.005   membrane associated guanylate kinase, WW and PDZ dom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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