Guide to the Human Genome
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Name: IMPDH1 Sequence: fasta or formatted (566aa) NCBI GI: 217035152
Description:

inosine monophosphate dehydrogenase 1 isoform d

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [589aa] inosine monophosphate dehydrogenase 1 isoform c
alt prot [514aa] inosine monophosphate dehydrogenase 1 isoform e
alt prot [509aa] inosine monophosphate dehydrogenase 1 isoform f
alt prot [489aa] inosine monophosphate dehydrogenase 1 isoform g
alt prot [563aa] inosine monophosphate dehydrogenase 1 isoform b
alt prot [599aa] inosine monophosphate dehydrogenase 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         50           3
 C cysteine            1.2          7           1
 D aspartate           5.5         31           2
 E glutamate           5.3         30           1
 F phenylalanine       2.7         15           2
 G glycine             9.9         56           3
 H histidine           2.5         14           2
 I isoleucine          6.2         35           2
 K lysine              5.8         33           2
 L leucine             9.0         51           2
 M methionine          3.4         19           2
 N asparagine          1.4          8           1
 P proline             4.8         27           3
 Q glutamine           4.6         26           1
 R arginine            5.1         29           2
 S serine              7.1         40           4
 T threonine           5.8         33           2
 V valine              8.1         46           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inosine monophosphate dehydrogenase 1 isoform d [Ho... 
IMPDH1                0.984   inosine monophosphate dehydrogenase 1 isoform a [Hom...
IMPDH1                0.948   inosine monophosphate dehydrogenase 1 isoform c [Ho...
IMPDH1                0.929   inosine monophosphate dehydrogenase 1 isoform b [Hom...
IMPDH1                0.844   inosine monophosphate dehydrogenase 1 isoform e [Ho...
IMPDH1                0.831   inosine monophosphate dehydrogenase 1 isoform f [Ho...
IMPDH1                0.783   inosine monophosphate dehydrogenase 1 isoform g [Ho...
IMPDH2                0.728   inosine monophosphate dehydrogenase 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 1 
GMPR                  0.087   guanosine monophosphate reductase 
MTIF2                 0.008   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.008   mitochondrial translational initiation factor 2 prec...
LOC100292629          0.008   PREDICTED: hypothetical protein 
LOC100289960          0.008   PREDICTED: hypothetical protein XP_002346853 
LOC100286905          0.008   PREDICTED: hypothetical protein XP_002342691 
HAO2                  0.007   hydroxyacid oxidase 2 
HAO2                  0.007   hydroxyacid oxidase 2 
PRRT2                 0.006   proline-rich transmembrane protein 2 
LOC100292736          0.006   PREDICTED: similar to hCG1996962 
LOC100290104          0.006   PREDICTED: hypothetical protein XP_002347921 
LOC100287572          0.006   PREDICTED: hypothetical protein XP_002343657 
HAO1                  0.006   hydroxyacid oxidase 1 
BIN2                  0.006   bridging integrator 2 
LOC100129098          0.005   PREDICTED: hypothetical protein 
TBX1                  0.005   T-box 1 isoform B 
TBX1                  0.005   T-box 1 isoform C 
TBX1                  0.005   T-box 1 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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