Guide to the Human Genome
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Name: NOP14 Sequence: fasta or formatted (857aa) NCBI GI: 55769587
Description:

probable nucleolar complex protein 14

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         60           2
 C cysteine            1.4         12           2
 D aspartate           5.6         48           2
 E glutamate          11.2         96           3
 F phenylalanine       3.2         27           1
 G glycine             5.4         46           5
 H histidine           2.7         23           2
 I isoleucine          2.8         24           1
 K lysine              9.9         85           2
 L leucine            12.1        104           3
 M methionine          2.5         21           2
 N asparagine          2.9         25           1
 P proline             4.3         37           2
 Q glutamine           4.7         40           2
 R arginine            6.9         59           2
 S serine              6.9         59           2
 T threonine           3.9         33           1
 V valine              4.6         39           2
 W tryptophan          0.6          5           1
 Y tyrosine            1.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   probable nucleolar complex protein 14 
EIF5B                 0.029   eukaryotic translation initiation factor 5B 
TCHH                  0.024   trichohyalin 
CALD1                 0.021   caldesmon 1 isoform 1 
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
WDR87                 0.020   NYD-SP11 protein 
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
ESF1                  0.020   ABT1-associated protein 
NEFH                  0.019   neurofilament, heavy polypeptide 200kDa 
RPGR                  0.019   retinitis pigmentosa GTPase regulator isoform C [Hom...
CTR9                  0.019   SH2 domain binding protein 1 
NSBP1                 0.019   nucleosomal binding protein 1 
RBM25                 0.018   RNA binding motif protein 25 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 1 
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
CGNL1                 0.018   cingulin-like 1 
LOC100286959          0.018   PREDICTED: hypothetical protein XP_002343921 
CDC2L2                0.018   cell division cycle 2-like 2 isoform 4 
ANKRD12               0.018   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.018   ankyrin repeat domain 12 isoform 1 
CCAR1                 0.017   cell-cycle and apoptosis regulatory protein 1 
IWS1                  0.017   IWS1 homolog 
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LOC283685             0.017   PREDICTED: golgi autoantigen, golgin subfamily a-li...
NEFM                  0.017   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.017   neurofilament, medium polypeptide 150kDa isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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