Guide to the Human Genome
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Name: IMPDH1 Sequence: fasta or formatted (563aa) NCBI GI: 34328928
Description:

inosine monophosphate dehydrogenase 1 isoform b

Referenced in:

Purine Biosynthesis and Catabolism

Other entries for this name:
alt prot [589aa] inosine monophosphate dehydrogenase 1 isoform c
alt prot [514aa] inosine monophosphate dehydrogenase 1 isoform e
alt prot [509aa] inosine monophosphate dehydrogenase 1 isoform f
alt prot [489aa] inosine monophosphate dehydrogenase 1 isoform g
alt prot [566aa] inosine monophosphate dehydrogenase 1 isoform d
alt prot [599aa] inosine monophosphate dehydrogenase 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         51           3
 C cysteine            1.2          7           1
 D aspartate           5.7         32           2
 E glutamate           5.3         30           1
 F phenylalanine       2.8         16           2
 G glycine            10.5         59           3
 H histidine           2.3         13           2
 I isoleucine          6.4         36           2
 K lysine              5.9         33           2
 L leucine             8.7         49           2
 M methionine          3.4         19           2
 N asparagine          1.6          9           1
 P proline             4.4         25           3
 Q glutamine           4.8         27           2
 R arginine            4.3         24           2
 S serine              6.7         38           4
 T threonine           5.9         33           2
 V valine              7.6         43           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inosine monophosphate dehydrogenase 1 isoform b [Hom... 
IMPDH1                0.987   inosine monophosphate dehydrogenase 1 isoform c [Ho...
IMPDH1                0.983   inosine monophosphate dehydrogenase 1 isoform a [Hom...
IMPDH1                0.931   inosine monophosphate dehydrogenase 1 isoform d [Ho...
IMPDH1                0.907   inosine monophosphate dehydrogenase 1 isoform e [Ho...
IMPDH1                0.893   inosine monophosphate dehydrogenase 1 isoform f [Ho...
IMPDH1                0.845   inosine monophosphate dehydrogenase 1 isoform g [Ho...
IMPDH2                0.781   inosine monophosphate dehydrogenase 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 2 
GMPR2                 0.089   guanosine monophosphate reductase 2 isoform 1 
GMPR                  0.088   guanosine monophosphate reductase 
MTIF2                 0.008   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.008   mitochondrial translational initiation factor 2 prec...
HAO2                  0.007   hydroxyacid oxidase 2 
HAO2                  0.007   hydroxyacid oxidase 2 
ZXDA                  0.006   zinc finger, X-linked, duplicated A 
HAO1                  0.006   hydroxyacid oxidase 1 
ZXDB                  0.006   zinc finger, X-linked, duplicated B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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