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Search of human proteins with 47551356
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
(209 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47551356 hypothetical protein LOC408029 [Homo sapiens] 443 e-125
gi|47524184 hypothetical protein LOC29798 [Homo sapiens] 412 e-116
gi|169215684 PREDICTED: hypothetical protein [Homo sapiens] 375 e-104
gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo ... 237 6e-63
gi|89058402 PREDICTED: hypothetical protein [Homo sapiens] 237 6e-63
gi|89037235 PREDICTED: hypothetical protein [Homo sapiens] 234 5e-62
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 63 2e-10
gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens] 51 6e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 9e-06
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 44 1e-04
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 44 1e-04
gi|148886760 nanos homolog 3 [Homo sapiens] 42 5e-04
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 39 0.002
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 39 0.002
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 39 0.004
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens] 39 0.004
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 38 0.005
gi|116805330 small conductance calcium-activated potassium chann... 37 0.009
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 37 0.009
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.012
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 37 0.012
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 37 0.012
gi|22779860 forkhead box L1 [Homo sapiens] 37 0.016
gi|8922785 hypothetical protein LOC55267 [Homo sapiens] 37 0.016
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s... 36 0.021
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s... 36 0.021
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 36 0.027
gi|33356148 formin-like 1 [Homo sapiens] 36 0.027
gi|145309324 FH2 domain containing 1 [Homo sapiens] 35 0.035
>gi|47551356 hypothetical protein LOC408029 [Homo sapiens]
Length = 209
Score = 443 bits (1139), Expect = e-125
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MFVRPESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCP 60
MFVRPESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCP
Sbjct: 1 MFVRPESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCP 60
Query: 61 GTAQDQPSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWK 120
GTAQDQPSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWK
Sbjct: 61 GTAQDQPSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWK 120
Query: 121 LWRQRPGFAIWAPLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRG 180
LWRQRPGFAIWAPLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRG
Sbjct: 121 LWRQRPGFAIWAPLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRG 180
Query: 181 SSRSSCSQRRPPPPGMEVCPQLGIWAICP 209
SSRSSCSQRRPPPPGMEVCPQLGIWAICP
Sbjct: 181 SSRSSCSQRRPPPPGMEVCPQLGIWAICP 209
>gi|47524184 hypothetical protein LOC29798 [Homo sapiens]
Length = 203
Score = 412 bits (1060), Expect = e-116
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM
Sbjct: 10 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 69
Query: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP
Sbjct: 70 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 129
Query: 136 HWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSSCSQRRPPPPG 195
HWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSSCSQRRPPPPG
Sbjct: 130 HWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSSCSQRRPPPPG 189
Query: 196 MEVCPQLGIWAICP 209
MEVCPQLGIWAICP
Sbjct: 190 MEVCPQLGIWAICP 203
>gi|169215684 PREDICTED: hypothetical protein [Homo sapiens]
Length = 283
Score = 375 bits (963), Expect = e-104
Identities = 179/193 (92%), Positives = 182/193 (94%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
APASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQPSEELPDFM
Sbjct: 77 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 136
Query: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
APPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRPG A WAPLP
Sbjct: 137 APPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWAPLP 196
Query: 136 HWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSSCSQRRPPPPG 195
H RGTSLIQQSSSPAAE PAATAAG +C+PAGGAGEQEKEPVSRGSSRSSCSQRRPPPPG
Sbjct: 197 HXRGTSLIQQSSSPAAEEPAATAAGGICMPAGGAGEQEKEPVSRGSSRSSCSQRRPPPPG 256
Query: 196 MEVCPQLGIWAIC 208
MEVCPQLGIWAIC
Sbjct: 257 MEVCPQLGIWAIC 269
>gi|239747182 PREDICTED: hypothetical protein XP_002343934 [Homo
sapiens]
Length = 130
Score = 237 bits (604), Expect = 6e-63
Identities = 112/121 (92%), Positives = 113/121 (93%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
APASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQPSEELPDFM
Sbjct: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 69
Query: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
APPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRPG A WAPLP
Sbjct: 70 APPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWAPLP 129
Query: 136 H 136
H
Sbjct: 130 H 130
>gi|89058402 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 237 bits (604), Expect = 6e-63
Identities = 112/121 (92%), Positives = 113/121 (93%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
APASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQPSEELPDFM
Sbjct: 10 APASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 69
Query: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
APPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRPG A WAPLP
Sbjct: 70 APPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWAPLP 129
Query: 136 H 136
H
Sbjct: 130 H 130
>gi|89037235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 234 bits (596), Expect = 5e-62
Identities = 111/121 (91%), Positives = 112/121 (92%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFM 75
A ASGAEIQ FPVPAVEPVPAPGADSPPGTALELEEAPEPS CPGTAQDQPSEELPDFM
Sbjct: 10 AAASGAEIQLFPVPAVEPVPAPGADSPPGTALELEEAPEPSFCCPGTAQDQPSEELPDFM 69
Query: 76 APPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLP 135
APPVEP ASALELKVWLELEV ERG QHSSSQ+LPHCSQSWAQWKLWRQRPG A WAPLP
Sbjct: 70 APPVEPRASALELKVWLELEVVERGDQHSSSQKLPHCSQSWAQWKLWRQRPGCATWAPLP 129
Query: 136 H 136
H
Sbjct: 130 H 130
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 63.2 bits (152), Expect = 2e-10
Identities = 42/116 (36%), Positives = 48/116 (41%), Gaps = 30/116 (25%)
Query: 3 VRPESGEQGPETLAPASGAEIQRFPV------------PAVEP----------------- 33
V PE E P+ AP G P PA+EP
Sbjct: 114 VLPEPNEAKPDDPAPRPGQHALTMPALEPAPPLLADLGPALEPESPAALGPPGYLHSAPG 173
Query: 34 -VPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFMAPPVEPPASALEL 88
PAPG PPGT LE + APE SC C G+ ++QPSEELPD P A L L
Sbjct: 174 PAPAPGEGPPPGTVLEPQSAPESSCPCRGSVKNQPSEELPDMTTFPPRLLAEQLTL 229
>gi|56090618 CMT1A duplicated region transcript 15 [Homo sapiens]
Length = 188
Score = 51.2 bits (121), Expect = 6e-07
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 10/66 (15%)
Query: 13 ETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELP 72
+TLAP AE++ P PA EP PA ++PP ALELE AP A+DQ +EELP
Sbjct: 85 QTLAPGPCAEVRALPAPAAEPEPA-WEEAPPERALELEGAP---------AKDQTNEELP 134
Query: 73 DFMAPP 78
+ P
Sbjct: 135 EITEVP 140
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.4 bits (111), Expect = 9e-06
Identities = 51/170 (30%), Positives = 63/170 (37%), Gaps = 28/170 (16%)
Query: 11 GPETLAP-----ASGAEIQRFPVPAVEPVPAPGADSPPGTALEL--EEAPEPSCRCPGTA 63
GP L P A G IQ P PAP A SPP AP P P T
Sbjct: 221 GPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATL 280
Query: 64 QDQPSEEL-PDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLW 122
P P AP V PPA+A + G + + P +
Sbjct: 281 ARPPGHPAGPPTAAPAVPPPAAA-------------QNGGSAGAAPAPAPAAGGPAGVSG 327
Query: 123 RQRPGFAIWAPLPHWRGTS--LIQQSSSPAAE-----GPAATAAGAVCLP 165
+ PG A AP P + S + Q++ PAA+ GPA+TAA V P
Sbjct: 328 QPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGP 377
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 45.1 bits (105), Expect = 4e-05
Identities = 57/191 (29%), Positives = 75/191 (39%), Gaps = 20/191 (10%)
Query: 13 ETLAPASGAEIQRFPVPAVEPVPAPG-ADSPPGTALELEEAPEP-SCRCPGTAQDQ-PSE 69
E L+ G+E + P P P P+P A PP L P P + R PG A+ P
Sbjct: 24 EALSKVEGSECRALPTPTA-PGPSPRRAPEPPLLTLR----PRPGTLRAPGNAESPAPRR 78
Query: 70 ELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQ--LP-HCSQSWAQWKLWRQRP 126
PD P A++ K+WL + RGG+ S LP H +Q+ P
Sbjct: 79 ARPDLGRPWATRSAASPHSKMWLGSHL--RGGEMSGDPHTDLPAHPAQTTNPELELPADP 136
Query: 127 GFAIWAPLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGG-----AGEQEKEPVSRGS 181
APL R SPA EGP A G P G +G +E S GS
Sbjct: 137 AQPDPAPLS--RPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGS 194
Query: 182 SRSSCSQRRPP 192
+ + + R P
Sbjct: 195 AAPAMASVRGP 205
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAP------EPSCRCPGTAQDQPSE 69
AP ++ P PA+E PAP D P LELE AP +PS P A++ SE
Sbjct: 318 APEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENGLSE 377
Query: 70 ELPDFMAPPVEPPASALEL 88
E P + P + A L
Sbjct: 378 EKPHLLVFPPDLVAEQFTL 396
Score = 36.6 bits (83), Expect = 0.016
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 20/101 (19%)
Query: 27 PVPAVEPVPAPGADSPPGTALELEEAPEPSC-RCPGTA---QDQPSEELPDFMAPPVEP- 81
PVPA P P P PG+ LE+ AP P + P A + P+ L AP +P
Sbjct: 285 PVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPA 344
Query: 82 PASALELK-----------VWLELEVAERGGQHSSSQQLPH 111
P+ LEL+ W VAE G S++ PH
Sbjct: 345 PSQTLELEPAPAPVPSLQPSWPSPVVAENG----LSEEKPH 381
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAP------EPSCRCPGTAQDQPSE 69
AP ++ P PA+E PAP D P LELE AP +PS P A++ SE
Sbjct: 263 APEPAVGLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSWPSPVVAENGLSE 322
Query: 70 ELPDFMAPPVEPPASALEL 88
E P + P + A L
Sbjct: 323 EKPHLLVFPPDLVAEQFTL 341
Score = 36.6 bits (83), Expect = 0.016
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 20/101 (19%)
Query: 27 PVPAVEPVPAPGADSPPGTALELEEAPEPSC-RCPGTA---QDQPSEELPDFMAPPVEP- 81
PVPA P P P PG+ LE+ AP P + P A + P+ L AP +P
Sbjct: 230 PVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPAPALELEPAPEQDPA 289
Query: 82 PASALELK-----------VWLELEVAERGGQHSSSQQLPH 111
P+ LEL+ W VAE G S++ PH
Sbjct: 290 PSQTLELEPAPAPVPSLQPSWPSPVVAENG----LSEEKPH 326
>gi|148886760 nanos homolog 3 [Homo sapiens]
Length = 192
Score = 41.6 bits (96), Expect = 5e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 3 VRPESGEQGPET-LAPASGAEIQRFPVPAVEPVPAPGADSPPG-----TALELEEAPEPS 56
VR SG++GPET L+P E PV A+EP+PAP + PG +LE APE
Sbjct: 17 VRALSGKEGPETRLSPQPEPEPMLEPVSALEPMPAPESVPVPGPKDQKRSLESSPAPERL 76
Query: 57 C 57
C
Sbjct: 77 C 77
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 39.3 bits (90), Expect = 0.002
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 7 SGEQGPETLAPAS-GAEIQRFPVPAVEP--VPAPGADSPPGTALELEEAPEPSCRCPGTA 63
SG + PE+ P S G + P P P P PG P L+ A EP C CPG
Sbjct: 688 SGSRCPESWDPVSAGGHAEGCPSPKQTPRASPEPGYPGEPLLGLQAASAQEPGC-CPG-- 744
Query: 64 QDQPSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQ 107
LP + PA L W E A GG H ++
Sbjct: 745 -------LPHLCSAQGLAPAPCLVTPSW--TETASSGGDHPQAE 779
Score = 28.1 bits (61), Expect = 5.6
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 29 PAVEPVPAPGADSPPGTALELEEAPEPSCR-CPGTAQDQPSEELPDFMAPPVEPPASALE 87
P EP A A+ G L L P PS P +++ + + PD + P PA+ E
Sbjct: 776 PQAEPKLATEAEGTTGPRLPLPSVPSPSQEGAPLPSEEASAPDAPDAL-PDSPTPATGGE 834
Query: 88 LKVWLELEVAERGGQHSSSQQLP 110
+ ++L A G S + P
Sbjct: 835 VSA-IKLASALNGSSSSPEVEAP 856
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 18/108 (16%)
Query: 3 VRPESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGT 62
+RP G + P P P E P P + SPP + L EAP
Sbjct: 1507 IRPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSS-SPPPLSSPLPEAP--------- 1556
Query: 63 AQDQPSEELPDFMAPPVEPPASALELKVWL-----ELEVAERGGQHSS 105
QP EE P AP PP+S+LEL L L+ + RG Q S
Sbjct: 1557 ---QPKEEPPVPEAPSSGPPSSSLELLASLTPEAFSLDSSLRGKQRMS 1601
Score = 28.5 bits (62), Expect = 4.3
Identities = 32/110 (29%), Positives = 38/110 (34%), Gaps = 35/110 (31%)
Query: 10 QGPETLAPASGA--------EIQRFPVPAVEPVPA---------PGADSPPGTALELEEA 52
Q P AP G Q +P PA +P+PA PG PP L A
Sbjct: 995 QSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPA 1054
Query: 53 PEP----------SCRCPGTA-QDQPSEELPDFMAP-------PVEPPAS 84
P + R P +A Q PS L AP P PPA+
Sbjct: 1055 PSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAA 1104
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 38.5 bits (88), Expect = 0.004
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 14 TLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALE--LEEAPEPSCRCPGTAQDQPSEEL 71
T PA+ + P PA EP P P + P A E E APEP+ + +P+ EL
Sbjct: 82 TPEPATEPASEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPEL 141
Query: 72 PDFMAPPVEP 81
+AP + P
Sbjct: 142 TPEVAPELAP 151
Score = 35.8 bits (81), Expect = 0.027
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 9 EQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPS 68
E PE PA+ + + P PA+E VP P + P A EL APEP+ P +
Sbjct: 112 EPAPE---PATESAPEPTPEPALESVPEPAPELTPEVAPEL--APEPT---PEPVTELAP 163
Query: 69 EELPDFMAPPVEP-PASALELKVWLELEVAERGGQHS---SSQQLPHCSQSWAQWK 120
E P+ AP P PA L + ++ ERG + S S P SW++ K
Sbjct: 164 EFCPE-AAPEFRPSPAPCL---LQCPVDTRERGLKTSPSPSPSPSPRTPMSWSRIK 215
Score = 35.4 bits (80), Expect = 0.035
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQ 64
P + P L+ AS I P P + P P P A S T L E PEP+
Sbjct: 36 PPAPPPAPPLLSEASPEPIPE-PCPELAPGPCPEATSESATELYTEPTPEPATEPASEPA 94
Query: 65 DQP-SEELPDFMAPPVEPPA 83
+P +E P+ P PA
Sbjct: 95 PEPATEPAPEPATEPAPEPA 114
Score = 32.3 bits (72), Expect = 0.30
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 29 PAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFMAPPVEPPASALEL 88
PA EP P P + P A E APEP+ P A + E P+ V PA L
Sbjct: 89 PASEPAPEPATEPAPEPA--TEPAPEPA---PEPATESAPEPTPEPALESVPEPAPELTP 143
Query: 89 KVWLEL 94
+V EL
Sbjct: 144 EVAPEL 149
Score = 32.0 bits (71), Expect = 0.39
Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 16/85 (18%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEP---SC--RC 59
P+ GEQ E+ P P P P P PP L E +PEP C
Sbjct: 14 PQDGEQPAESPEP-----------PPPWPPPPPPPAPPPAPPLLSEASPEPIPEPCPELA 62
Query: 60 PGTAQDQPSEELPDFMAPPVEPPAS 84
PG + SE + P PA+
Sbjct: 63 PGPCPEATSESATELYTEPTPEPAT 87
Score = 30.0 bits (66), Expect = 1.5
Identities = 23/83 (27%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCR-CPGTA 63
PE + AP E P P PAP P T E PEP+ P A
Sbjct: 83 PEPATEPASEPAPEPATE----PAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPA 138
Query: 64 QDQPSEELPDFMAPPVEPPASAL 86
+ E P+ P P + L
Sbjct: 139 PELTPEVAPELAPEPTPEPVTEL 161
>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
Length = 1261
Score = 38.5 bits (88), Expect = 0.004
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 13/107 (12%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAV------EPVPAPGADSPPGT-----ALELEEAP 53
P + + P TL P + P + E +P A PPGT L ++ P
Sbjct: 1148 PLAPVRAPRTLQPQHWTTFYKPHAPIISIRGNEEKPASPSAAVPPGTDHDPHGLVVKSMP 1207
Query: 54 EP--SCRCPGTAQDQPSEELPDFMAPPVEPPASALELKVWLELEVAE 98
+P + CPG A QP E+ + P V P LK + E E
Sbjct: 1208 DPDKASACPGQATGQPKEDSEELGLPDVNPMCQRPRLKRMQQFEDLE 1254
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 38.1 bits (87), Expect = 0.005
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 3 VRPESGEQGPETLAPASGAEIQRFPVPAVEPVPAPG-ADSPPGTALELEEAPEPSCRCPG 61
++P SGE ET A + A IQ AP PP E P P+ P
Sbjct: 576 LQPPSGE---ETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPA 632
Query: 62 TAQDQPSEELPDFMAPPVEPPASA 85
Q P+EE P + PP A A
Sbjct: 633 EVQPPPAEEAPAEVQPPPAEEAPA 656
Score = 36.2 bits (82), Expect = 0.021
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 3 VRPESGEQGPETLAPASG----AEIQRFPV---PA-VEPVPAPGADS----PPGTALELE 50
V+P E+ P + P AE+Q P PA V+P PA A + PP E
Sbjct: 610 VQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAE 669
Query: 51 EAPEPSCRCPGTAQDQPSEELP--DFMAPPVEPPA 83
P P+ P Q P+EE P + +A PPA
Sbjct: 670 VQPPPAEEAPAEVQSLPAEETPIEETLAAVHSPPA 704
Score = 35.8 bits (81), Expect = 0.027
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 7 SGEQGPETLAPASGAEIQRFPVPA-VEPVPAPGADS----PPGTALELEEAPEPSCRCPG 61
S E+ P + P E PA V+P PA A + PP E P P+ P
Sbjct: 602 SAEEAPAEVQPPPAEE-----APAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPA 656
Query: 62 TAQDQPSEELPDFMAPPVEPPASA 85
Q P+EE P + PP A A
Sbjct: 657 EVQPPPAEEAPAEVQPPPAEEAPA 680
Score = 31.2 bits (69), Expect = 0.66
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 7 SGEQGPETLAPASGAE--IQRFPVPAVEP--VPAPGADSPPGTALELEEAPEPSCRC--- 59
S E+ P+ A + AE ++ P PA E V P PP EE+P
Sbjct: 296 STEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSA----EESPSVELLAEIL 351
Query: 60 PGTAQDQPSEELPDFMAPPVEPPASALEL 88
P +A++ PSEE P + PP + ++EL
Sbjct: 352 PPSAEESPSEEPPAEILPPPAEKSPSVEL 380
Score = 31.2 bits (69), Expect = 0.66
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 3 VRPESGEQGP--ETLAPASGAEIQRFPVPAVEPVPAPGA--DSP----PGTALEL----- 49
+ P E+ P E L Q+ P+ V+P+PA GA ++P P T E
Sbjct: 367 ILPPPAEKSPSVELLGEIRSPSAQKAPIE-VQPLPAEGALEEAPAKVEPPTVEETLADVQ 425
Query: 50 ----EEAPEPSCR--CPGTAQDQPSEELPDFMAPPVEPPASALELKVWLELEVA 97
EEAP R TA + P+EE P P+ +A E ++L A
Sbjct: 426 PLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAA 479
>gi|116805330 small conductance calcium-activated potassium channel
protein 3 isoform a [Homo sapiens]
Length = 731
Score = 37.4 bits (85), Expect = 0.009
Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 24/151 (15%)
Query: 48 ELEEAPEPSCRCPGTAQDQPSEELPDFMAPPVEPPASALE-LKVWL-----ELEVAERGG 101
+L+E P+ C G Q Q ++ PP PPA+ + L L +L+ ++
Sbjct: 14 DLDEDPKCPCPSSGDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQ 73
Query: 102 QHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPL-----PHWRGTSLIQQSSSPAAE---- 152
Q QQ PH AQ + PG +P P T+++ SS ++
Sbjct: 74 QQQQQQQPPHPLSQLAQLQSQPVHPGLLHSSPTAFRAPPSSNSTAILHPSSRQGSQLNLN 133
Query: 153 ------GPAATAAGAVCLPAGGAGEQEKEPV 177
P++TA P GG+ ++ P+
Sbjct: 134 DHLLGHSPSSTATSG---PGGGSRHRQASPL 161
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 37.4 bits (85), Expect = 0.009
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 16 APASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQP-SEELPDF 74
APA+ A P PA P PAP A + P A A + PG AQ P ++
Sbjct: 118 APAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPL 177
Query: 75 MAPPVEPPA 83
APP P A
Sbjct: 178 AAPPPAPAA 186
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 37.0 bits (84), Expect = 0.012
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Query: 5 PESGEQGPETLAPA-SGAEIQRFPVPAVEPVPAPGADSPPGTAL-ELEEAPEPSCRCPGT 62
P S P PA + +Q P P + P+ P +PP AL L+ P P P +
Sbjct: 584 PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLS 643
Query: 63 AQDQPSEELPDFMA---------PPVEPPASA 85
PS + P+ +A PP PP A
Sbjct: 644 PLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 675
Score = 35.0 bits (79), Expect = 0.046
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 12 PETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEEL 71
P + P+ A + P+ P P +PP L+ P P PG A PS L
Sbjct: 765 PLQVPPSPPASLPMSPLAKPPPQAPPALATPP-----LQALPSPPASFPGQAPFSPSASL 819
Query: 72 PDFMAPPVEPPASA 85
P M+P PP A
Sbjct: 820 P--MSPLATPPPQA 831
Score = 32.7 bits (73), Expect = 0.23
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 5 PESGEQGPETLAPASGAE--IQRFPVPAVEPVPAPGADSPPGT-----ALELEEAPEPSC 57
P S P + AP S A +Q P P P +P A PP A L+ P P
Sbjct: 684 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA 743
Query: 58 RCPGTAQDQPSEELPDFM-APPVEPPAS 84
P + P +P + APP++ P S
Sbjct: 744 SPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Score = 32.3 bits (72), Expect = 0.30
Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVP----AVEPVPAPGADSPP-GTALELEEAPEPSC-- 57
P G LA S + + PVP A P+PA SPP T L L P PS
Sbjct: 294 PALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAP-PSPSAPP 352
Query: 58 ---RCPGTAQDQPSEELPDFMAPPVEPPAS 84
P PS+ P PP++ P S
Sbjct: 353 SLQTLPSPPATPPSQAPPSMTTPPMQAPPS 382
Score = 27.7 bits (60), Expect = 7.3
Identities = 43/183 (23%), Positives = 61/183 (33%), Gaps = 34/183 (18%)
Query: 12 PETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEEL 71
PET P+S A PA+ P G SPP + L P Q PS
Sbjct: 581 PET--PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS--- 635
Query: 72 PDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIW 131
PP PP S L + S Q P+ + P +
Sbjct: 636 -----PPASPPLSPLA----------------TPSPQAPNALAVHLLQAPFSPPPSPPVQ 674
Query: 132 APLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSSCSQRRP 191
AP + + S++P ++ P + AA + +P P S S S+ +
Sbjct: 675 APFSP-PASPPVSPSATPPSQAPPSLAAPPLQVP-------PSPPASPPMSPSATPPPQA 726
Query: 192 PPP 194
PPP
Sbjct: 727 PPP 729
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 37.0 bits (84), Expect = 0.012
Identities = 46/188 (24%), Positives = 71/188 (37%), Gaps = 38/188 (20%)
Query: 29 PAVEPVPAPG-ADSPPGTALELEEAPEPSCRCPGTAQDQPSEELP--------DFMAPPV 79
P + P PAP A S PG + P + P + + LP D PP+
Sbjct: 1213 PHLSPSPAPSTASSAPGRTWQGNGEMTPPLQGPRARFRKKPKALPYRRENSPGDLPPPPL 1272
Query: 80 EPP----ASALELKVWLELE--VAERGGQHSSSQQLPHCSQ--------SWAQWKLWRQR 125
PP + ALEL+ + ER G+ + Q +P +Q +W + R
Sbjct: 1273 PPPEEEASWALELRAAGSMSSLERERSGERKAVQAVPLAAQRVLHPDEEAWLPY----SR 1328
Query: 126 PGFAIWAPLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSS 185
P F L +GTS + S ++ G +++ + G G SR S+
Sbjct: 1329 PSF-----LSRGQGTSTCSTAGSNSSRGSSSSRG------SRGPGRSRSRSQSRSQSQRP 1377
Query: 186 CSQRRPPP 193
+RR P
Sbjct: 1378 GQKRREEP 1385
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 37.0 bits (84), Expect = 0.012
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPV-PAPGADSPPGTALELEEAPEPSCRCP--- 60
P S Q P+ AP + ++ Q+ P+ P P P + PP +L++AP+P P
Sbjct: 198 PPSTNQHPQP-APQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPHSH 256
Query: 61 GTAQDQPSEELPDFMAPPVEPPAS 84
Q+QPS +PP +P S
Sbjct: 257 SQNQNQPS-PTQQSSSPPQKPSQS 279
>gi|22779860 forkhead box L1 [Homo sapiens]
Length = 345
Score = 36.6 bits (83), Expect = 0.016
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 132 APLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAGGAGEQEKEPVSRGSSRSS 185
APL HW GT+ + + AA+G AA A G G G + P SR S +SS
Sbjct: 204 APL-HWPGTASPNEDAGDAAQGAAAVAVGQAARTGDGPGSPLR-PASRSSPKSS 255
>gi|8922785 hypothetical protein LOC55267 [Homo sapiens]
Length = 138
Score = 36.6 bits (83), Expect = 0.016
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 17 PASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDFMA 76
PAS P + P+PA SPP A P RCP +A P+ F A
Sbjct: 2 PASATAAWHCPPLCLPPLPASAPTSPPNPATRPAPGPGRRARCPQSAHPAPTRGALTFWA 61
Query: 77 P 77
P
Sbjct: 62 P 62
>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
sapiens]
Length = 1074
Score = 36.2 bits (82), Expect = 0.021
Identities = 53/227 (23%), Positives = 77/227 (33%), Gaps = 45/227 (19%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPVPA---PGADSPPGTALELEEAPEPSCRCPG 61
P S + +L + G E P P EP A P + PP +P+ P
Sbjct: 175 PRSPPRSELSLISSRGEEAIPSPTPRAEPFSANGSPQTELPPTELSVHTPSPQAEPLSPE 234
Query: 62 TAQDQ--------PSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCS 113
TAQ + P P A EPP+ L E G +S Q S
Sbjct: 235 TAQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHSL--------GEGGFFRASPQPRRPSS 286
Query: 114 QSWAQWKLWRQRP-------------GFAIWAPLPHWRGTSLIQQSSSPAA------EGP 154
Q WA ++ +RP G W G L P A GP
Sbjct: 287 QGWASPQVAGRRPDPFPSVPRGRGQQGQGPWGTGGTPHGPRLEPDPQHPGAWLPLLSNGP 346
Query: 155 AATAAGAVCLPAGG----AGEQEKEPVSRGSSRSSCSQRRPPPPGME 197
A++ ++ P+ +GE E+ R S++ C +P P ++
Sbjct: 347 HASSLWSLFAPSSPIPRCSGESEQ---LRACSQAPCPPEQPDPRALQ 390
>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
sapiens]
Length = 877
Score = 36.2 bits (82), Expect = 0.021
Identities = 53/227 (23%), Positives = 77/227 (33%), Gaps = 45/227 (19%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPVPA---PGADSPPGTALELEEAPEPSCRCPG 61
P S + +L + G E P P EP A P + PP +P+ P
Sbjct: 175 PRSPPRSELSLISSRGEEAIPSPTPRAEPFSANGSPQTELPPTELSVHTPSPQAEPLSPE 234
Query: 62 TAQDQ--------PSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCS 113
TAQ + P P A EPP+ L E G +S Q S
Sbjct: 235 TAQTEVAPRTRPAPLRHHPRAQASGTEPPSPTHSL--------GEGGFFRASPQPRRPSS 286
Query: 114 QSWAQWKLWRQRP-------------GFAIWAPLPHWRGTSLIQQSSSPAA------EGP 154
Q WA ++ +RP G W G L P A GP
Sbjct: 287 QGWASPQVAGRRPDPFPSVPRGRGQQGQGPWGTGGTPHGPRLEPDPQHPGAWLPLLSNGP 346
Query: 155 AATAAGAVCLPAGG----AGEQEKEPVSRGSSRSSCSQRRPPPPGME 197
A++ ++ P+ +GE E+ R S++ C +P P ++
Sbjct: 347 HASSLWSLFAPSSPIPRCSGESEQ---LRACSQAPCPPEQPDPRALQ 390
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 35.8 bits (81), Expect = 0.027
Identities = 46/201 (22%), Positives = 72/201 (35%), Gaps = 8/201 (3%)
Query: 5 PESGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQ 64
P ET P+ A F P ++ + AP S P T + P + + P
Sbjct: 949 PAPSSTKSETRVPSETARTP-FKSPLLKGISAPVISSNPATTEVQRKKPSVAFKKPIFTH 1007
Query: 65 DQPSEELPDFMAPPVEPPASALELKVWLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQ 124
PS E P P+S+ + +V+ + G +S P + Q + Q
Sbjct: 1008 PMPSPEAVIQTRCPAHAPSSSFTVMALGPPKVSPKRGVPKTS---PRQTLGTPQRDIGLQ 1064
Query: 125 RPGFAIWAPLPHWRGTSLIQQSSSPAAEGPAATAAGAVCLPAG-GAGEQEKEPVSRGSSR 183
P +P H +S SP +G +A P+ G E VS SS
Sbjct: 1065 TPRI---SPSTHEPLEMTSSKSVSPGRKGQLNDSASTPPKPSFLGVNESPSSQVSSSSSS 1121
Query: 184 SSCSQRRPPPPGMEVCPQLGI 204
SS ++ P G + + G+
Sbjct: 1122 SSPAKSHNSPHGCQSAHEKGL 1142
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 35.8 bits (81), Expect = 0.027
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 7 SGEQGPETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQ 66
+G P+ LAPA+ P P P P P P AP + PG+ +
Sbjct: 523 TGSPSPD-LAPAAE------PAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPP 575
Query: 67 PSEELPDFMAPPVEPP 82
P+ LP + PP PP
Sbjct: 576 PAPPLPGDLPPPPPPP 591
Score = 28.1 bits (61), Expect = 5.6
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 12 PETLAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEEL 71
P +A SG + P P V P +P D P AP P PG P E
Sbjct: 505 PVAVATPSGGDA---PTPGV-PTGSPSPDLAPAAEPAPGAAPPPPPPLPGL--PSPQEAP 558
Query: 72 PDFMAPPVEPP 82
P APP PP
Sbjct: 559 PS--APPQAPP 567
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 35.4 bits (80), Expect = 0.035
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
Query: 15 LAPASGAEIQRFPVPAVEPVPAPGADSPPGTALELEEAPEPSCRCPGTAQDQPSEELPDF 74
+A A G I + P PA P P P SPP + E CP + P LP
Sbjct: 18 IATAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREE--------CPSSPPPPPPPPLPG- 68
Query: 75 MAPPVEPPASAL 86
PP+ PP L
Sbjct: 69 -EPPIPPPPPGL 79
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,834,433
Number of Sequences: 37866
Number of extensions: 816829
Number of successful extensions: 5651
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 4574
Number of HSP's gapped (non-prelim): 1376
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.