Guide to the Human Genome
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Name: NANOS3 Sequence: fasta or formatted (192aa) NCBI GI: 148886760
Description:

nanos homolog 3

Referenced in:

Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         13           1
 C cysteine            3.6          7           1
 D aspartate           3.6          7           1
 E glutamate           6.8         13           1
 F phenylalanine       2.1          4           1
 G glycine            10.4         20           5
 H histidine           3.1          6           1
 I isoleucine          1.0          2           1
 K lysine              5.2         10           2
 L leucine             7.8         15           1
 M methionine          2.1          4           1
 N asparagine          1.0          2           1
 P proline            10.9         21           1
 Q glutamine           3.1          6           1
 R arginine            8.3         16           2
 S serine              9.9         19           2
 T threonine           6.2         12           2
 V valine              4.7          9           1
 W tryptophan          0.5          1           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nanos homolog 3 
NANOS2                0.248   nanos homolog 2 
NANOS1                0.142   nanos homolog 1 
ZNF219                0.053   zinc finger protein 219 
ZNF219                0.053   zinc finger protein 219 
ZNF219                0.053   zinc finger protein 219 
SULT2B1               0.047   sulfotransferase family, cytosolic, 2B, member 1 iso...
SULT2B1               0.047   sulfotransferase family, cytosolic, 2B, member 1 iso...
RYR1                  0.045   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.045   skeletal muscle ryanodine receptor isoform 1 
SLC16A2               0.045   solute carrier family 16, member 2 
C2orf27B              0.045   hypothetical protein LOC408029 
DGKK                  0.037   diacylglycerol kinase kappa 
ZNF746                0.037   zinc finger protein 746 
KPRP                  0.034   keratinocyte proline-rich protein 
RALGDS                0.034   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.034   ral guanine nucleotide dissociation stimulator isof...
ZFPM1                 0.034   zinc finger protein, multitype 1 
PHLDA1                0.032   pleckstrin homology-like domain, family A, member 1 ...
TPRX1                 0.032   tetra-peptide repeat homeobox 
NOL3                  0.032   nucleolar protein 3 
FAM47C                0.032   hypothetical protein LOC442444 
G3BP1                 0.032   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.032   Ras-GTPase-activating protein SH3-domain-binding pro...
MARCH9                0.029   membrane-associated RING-CH protein IX 
CCNB1                 0.029   cyclin B1 
MAPK7                 0.029   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.029   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.029   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.029   mitogen-activated protein kinase 7 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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