BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] (689 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] 1438 0.0 gi|13376611 zinc finger protein 703 [Homo sapiens] 54 4e-07 gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 53 1e-06 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 52 2e-06 gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 52 2e-06 gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 51 3e-06 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 4e-06 gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 51 4e-06 gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 51 4e-06 gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 51 4e-06 gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 50 5e-06 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 50 7e-06 gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 50 9e-06 gi|13994287 BTE-binding protein 4 [Homo sapiens] 49 1e-05 gi|110832843 TBP-associated factor 4 [Homo sapiens] 49 1e-05 gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 49 1e-05 gi|32171233 BCDIN3 domain containing [Homo sapiens] 49 2e-05 gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens] 49 2e-05 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 2e-05 gi|38788260 bromodomain PHD finger transcription factor isoform ... 49 2e-05 gi|38788274 bromodomain PHD finger transcription factor isoform ... 49 2e-05 gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 48 3e-05 gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 48 3e-05 gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 48 3e-05 gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 48 3e-05 gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 48 3e-05 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 48 3e-05 gi|33636756 MAP/microtubule affinity-regulating kinase 4 [Homo s... 48 3e-05 gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 47 5e-05 gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens] 47 5e-05 >gi|47271406 bin3, bicoid-interacting 3 [Homo sapiens] Length = 689 Score = 1438 bits (3723), Expect = 0.0 Identities = 689/689 (100%), Positives = 689/689 (100%) Query: 1 MIEMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGS 60 MIEMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGS Sbjct: 1 MIEMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGS 60 Query: 61 PAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGG 120 PAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGG Sbjct: 61 PAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGG 120 Query: 121 GTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDCDSV 180 GTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDCDSV Sbjct: 121 GTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDCDSV 180 Query: 181 LPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPKDITDPLS 240 LPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPKDITDPLS Sbjct: 181 LPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPKDITDPLS 240 Query: 241 LNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGAS 300 LNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGAS Sbjct: 241 LNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGAS 300 Query: 301 QQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSS 360 QQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSS Sbjct: 301 QQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSS 360 Query: 361 RHRKRRRTSSKSEAGARGGGQGSKEKGRGSWGGRHHHHHPLPAAGFKKQQRKFQYGNYCK 420 RHRKRRRTSSKSEAGARGGGQGSKEKGRGSWGGRHHHHHPLPAAGFKKQQRKFQYGNYCK Sbjct: 361 RHRKRRRTSSKSEAGARGGGQGSKEKGRGSWGGRHHHHHPLPAAGFKKQQRKFQYGNYCK 420 Query: 421 YYGYRNPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI 480 YYGYRNPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI Sbjct: 421 YYGYRNPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI 480 Query: 481 HSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVP 540 HSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVP Sbjct: 481 HSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVP 540 Query: 541 LDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 600 LDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF Sbjct: 541 LDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 600 Query: 601 RRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSS 660 RRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSS Sbjct: 601 RRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSS 660 Query: 661 YELVATPHNTSKGFQRPVYLFHKARSPSH 689 YELVATPHNTSKGFQRPVYLFHKARSPSH Sbjct: 661 YELVATPHNTSKGFQRPVYLFHKARSPSH 689 >gi|13376611 zinc finger protein 703 [Homo sapiens] Length = 590 Score = 54.3 bits (129), Expect = 4e-07 Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 18/169 (10%) Query: 2 IEMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQE-----AASGELRGGTERGPGRCAP 56 IE+ A+K P + L G P PP + AA+ L G E+ PGR AP Sbjct: 80 IELDAKKSPLAL------LAQTCSQIGKPDPPPSSKLNSVAAAANGL--GAEKDPGRSAP 131 Query: 57 SAGSPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEER 116 A S AAA+ + A SS + GGG + G + +S ++ G++ Sbjct: 132 GAASAAAALKQLGDSPAEDKSSFKPYSKGSGGGDSRKDSGSSSVSS-TSSSSSSSPGDKA 190 Query: 117 RGGGGTELGPPAPPR--PRNGYQPHRPPGG--GGGKRRNSCNVGGGGGG 161 + PP PP P + PGG GG + C GGG GG Sbjct: 191 GFRVPSAACPPFPPHGAPVSASSSSSSPGGSRGGSPHHSDCKNGGGVGG 239 Score = 33.5 bits (75), Expect = 0.67 Identities = 60/258 (23%), Positives = 93/258 (36%), Gaps = 35/258 (13%) Query: 142 PGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLL 201 P G + S G GGGG K PA + D + +N L P+ + +L Sbjct: 5 PAGSNPRTPESSGSGSGGGG-KRPAVPAAVSLLPPADPLRQANRL-------PIRVLKML 56 Query: 202 DEEVSRTLNAETPKSSPLPAKGRDPVEILIPKDITDPLSL--NTCTDEG----------H 249 L+ E + PL + P+E+ K PL+L TC+ G + Sbjct: 57 SAHTGHLLHPEYLQ--PLSSTPVSPIELDAKKS---PLALLAQTCSQIGKPDPPPSSKLN 111 Query: 250 VVLASPLKTGRKRHRHRGQHHQQQQAAGGSE--SHPVPPTAPLTPLLHGEGASQQPRHRG 307 V A+ G ++ R AA + P + P G G + G Sbjct: 112 SVAAAANGLGAEKDPGRSAPGAASAAAALKQLGDSPAEDKSSFKPYSKGSGGGDSRKDSG 171 Query: 308 QNRDAPQPYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSRHRKRRR 367 + + +++ + D+ +PSA P PP + +SA SSSS R Sbjct: 172 SS--SVSSTSSSSSSSPGDKAGFRVPSAACPPF-----PPHGAPVSASSSSSSPGGSRGG 224 Query: 368 TSSKSEAGARGGGQGSKE 385 + S+ GGG G E Sbjct: 225 SPHHSDC-KNGGGVGGGE 241 >gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo sapiens] Length = 940 Score = 52.8 bits (125), Expect = 1e-06 Identities = 53/161 (32%), Positives = 62/161 (38%), Gaps = 28/161 (17%) Query: 14 PAPPP-PLKDESGGGGG----PTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGR- 67 P P P P GG GG P PP + A G GG G G P G R Sbjct: 696 PGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRG--GPGGGMVGGGGHRP 753 Query: 68 -ESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG---TE 123 E PG +SSG + + GGG H R + PG + GGGG Sbjct: 754 HEGPGGGMGNSSGHRPHEGPGGG-MGSGH---RPHEGPGGS---------MGGGGGHRPH 800 Query: 124 LGPPAPPRPRNGYQPHRPPGGG---GGKRRNSCNVGGGGGG 161 GP +G++PH PGGG GG R GG GG Sbjct: 801 EGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGG 841 Score = 50.4 bits (119), Expect = 5e-06 Identities = 47/163 (28%), Positives = 57/163 (34%), Gaps = 25/163 (15%) Query: 14 PAPPPPLKDESGG--GGGPTVPPHQEAASGELRGG----TERGPGRCAPSAGSPAAAVGR 67 P PPPP + GG GGGP P + G + GG GPG G+ + Sbjct: 716 PPPPPPFRGARGGRSGGGP--PNGRGGPGGGMVGGGGHRPHEGPGG---GMGNSSGHRPH 770 Query: 68 ESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPP 127 E PG S P H G G G R + PG G G G +G Sbjct: 771 EGPGGGMGSGHRP----HEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAG 826 Query: 128 APPRPRNG----------YQPHRPPGGGGGKRRNSCNVGGGGG 160 RP G ++PH PG GG +V G G Sbjct: 827 GGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRG 869 Score = 49.3 bits (116), Expect = 1e-05 Identities = 50/180 (27%), Positives = 58/180 (32%), Gaps = 40/180 (22%) Query: 14 PAPPPPLKDESGGGGGPTVP------------------PHQEAASGELRGGTERGPGRCA 55 P P P+ GG GGP P P G +RGG GPG Sbjct: 645 PGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYH 704 Query: 56 PSAGSPAAAVGRESP-------GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAA 108 G G E P GA S G G G G R + PG Sbjct: 705 RGRGGRG---GNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGM 761 Query: 109 PPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGG----GGGKRRNSCNVGGGGGGFKH 164 G G G +G +G++PH PGG GGG R + GG GG H Sbjct: 762 GNSSGHRPHEGPGGGMG--------SGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGH 813 Score = 42.4 bits (98), Expect = 0.001 Identities = 42/140 (30%), Positives = 43/140 (30%), Gaps = 26/140 (18%) Query: 25 GGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQ 84 GG GGP H G G GPG G GP Sbjct: 632 GGPGGPKGMQHFPPGPGGPMPGPHGGPG------------------GPVGPRLLGPPPPP 673 Query: 85 HRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRP-----RNGYQPH 139 RGG P G+ P P G RG GG P PP P R G Sbjct: 674 -RGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGG 732 Query: 140 RPPGGGGGKRRNSCNVGGGG 159 PP G GG VGGGG Sbjct: 733 GPPNGRGGP--GGGMVGGGG 750 Score = 42.4 bits (98), Expect = 0.001 Identities = 44/158 (27%), Positives = 52/158 (32%), Gaps = 15/158 (9%) Query: 25 GGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQ 84 GGG G PH E G + GG P P G + R G +G + Sbjct: 774 GGGMGSGHRPH-EGPGGSMGGGGGHRPHE-GPGGGISGGSGHRPHEGPGGGMGAGGGHRP 831 Query: 85 HRGGGPQAQSHGEARLSDPPGRAAPP-----DVGEERRGGGGTELGPPAPPRPRNGYQPH 139 H G G G R + PG P DV R G GPP P G H Sbjct: 832 HEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHR---GHDHRGPP--PHEHRG---H 883 Query: 140 RPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDC 177 PG GGG R GG + R + +C Sbjct: 884 DGPGHGGGGHRGHDGGHSHGGDMSNRPVCRHFMMKGNC 921 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 52.0 bits (123), Expect = 2e-06 Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 18/136 (13%) Query: 26 GGGGPTVPPHQEAASGELRGGTERGPG-----RCAPSAGSPAAAVGRESPGAAATSSSGP 80 G GP PP ++ GE+ ++G + P P +G+ P + A GP Sbjct: 1144 GPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGP-SGADGEPGP 1202 Query: 81 QAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTELGPPAPPRPR--- 133 + QQ G Q G PPG + P GE+ G ++GPP PP PR Sbjct: 1203 RGQQGLFG--QKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS 1260 Query: 134 ---NGYQPHRPPGGGG 146 P PPGG G Sbjct: 1261 GAPGADGPQGPPGGIG 1276 Score = 40.8 bits (94), Expect = 0.004 Identities = 42/130 (32%), Positives = 49/130 (37%), Gaps = 12/130 (9%) Query: 26 GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRE----SPGAAAT-SSSGP 80 G GP PP GE +GP R PA GR S GA +GP Sbjct: 568 GRPGPVGPPGSGGLKGEPGDVGPQGP-RGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGP 626 Query: 81 QAQQHRGGGPQAQSHGEARLSDPPGRAAPPDV-GEERRGGGGTELGP---PAPPRPRNGY 136 + RG A GE PG + PP G++ G E+GP P P PR Sbjct: 627 KGD--RGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLL 684 Query: 137 QPHRPPGGGG 146 P PPG G Sbjct: 685 GPKGPPGPPG 694 Score = 40.8 bits (94), Expect = 0.004 Identities = 43/140 (30%), Positives = 49/140 (35%), Gaps = 18/140 (12%) Query: 17 PPPLKDESGGGG--GPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA 74 PP K E+G G GP PP SG +GP G+P A + PG A Sbjct: 1235 PPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGP---PGGIGNPGAVGEKGEPGEA- 1290 Query: 75 TSSSGPQAQQHRGGGPQAQ-SHGEARLSDPPGRAAPP-------DVGEERRGGGGTELGP 126 G GG P + GE S P G A PP D G + G G Sbjct: 1291 ----GEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGD 1346 Query: 127 PAPPRPRNGYQPHRPPGGGG 146 P PP PPG G Sbjct: 1347 PGPPGEPGPAGQDGPPGDKG 1366 Score = 39.7 bits (91), Expect = 0.009 Identities = 48/164 (29%), Positives = 56/164 (34%), Gaps = 25/164 (15%) Query: 7 EKEPFLVPAPP----PPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E P PP PP D G GP P GE + GP G P Sbjct: 1313 ESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPG 1372 Query: 63 AAVGRESPGAAATSS-SGPQAQQHRGG--GPQAQ-----SHGEARLSDPPGRAAP--PDV 112 SPG SGP ++ G GP+ + + GEA L PPG+ P P Sbjct: 1373 QT---GSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQG 1429 Query: 113 GEERRGGGGT--------ELGPPAPPRPRNGYQPHRPPGGGGGK 148 + G G E G P P P P PPG G K Sbjct: 1430 APGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLK 1473 Score = 38.9 bits (89), Expect = 0.016 Identities = 48/174 (27%), Positives = 58/174 (33%), Gaps = 22/174 (12%) Query: 14 PAPPPPLKDESG--GGGGPTVPPHQEAASGELRGGTERGPGRCA----PSAGSPAAAVGR 67 P PP P + SG G GP PP G + G + PG P G P G Sbjct: 1251 PGPPGP-RGPSGAPGADGPQGPPGGIGNPGAV--GEKGEPGEAGEPGLPGEGGPPGPKGE 1307 Query: 68 -----ESPGAAATSSSGPQAQQHRGG-----GPQA--QSHGEARLSDPPGRAAPP-DVGE 114 ES + A GP+ G GP G P G+ PP D G+ Sbjct: 1308 RGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGD 1367 Query: 115 ERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFK 168 + G GP P P PPG G + R G G + P K Sbjct: 1368 DGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGK 1421 Score = 36.2 bits (82), Expect = 0.10 Identities = 46/166 (27%), Positives = 60/166 (36%), Gaps = 39/166 (23%) Query: 14 PAPPPPLKDESGGGG--------GPTVPPHQEAASGELRGGTERG-PGRCAPSAGSPAAA 64 PA PP + +G G GP PP ++ G E G G+ P P Sbjct: 941 PAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPG--PPGV 998 Query: 65 VGRESPGAAATSSSGPQAQQHRGG--GPQAQ------SHGEARLSDP-----PGRAAPPD 111 VG + P T +GP ++ G GP + + E DP PG+ PP Sbjct: 999 VGPQGP----TGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPG 1054 Query: 112 V----GEERRGGGGTELG------PPAPPRPRNGYQPHRPPGGGGG 147 + G+ G LG PP PP P G R P G G Sbjct: 1055 LRGFPGDRGLPGPVGALGLKGNEGPPGPPGPA-GSPGERGPAGAAG 1099 Score = 35.8 bits (81), Expect = 0.14 Identities = 51/178 (28%), Positives = 65/178 (36%), Gaps = 40/178 (22%) Query: 14 PAPPPPLKDESGGGG--------GPTVPPHQEAASGE-----LRG-----GTERGPGRCA 55 PA P + E G G G T P + A G+ LRG G + PG + Sbjct: 1397 PAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPG--S 1454 Query: 56 PSAGSPAAAVGRESPGAAATSS-SGPQAQQHRGG-----GPQAQS--HGEARLSDPPGRA 107 P P +G PG SGP+ ++ G GP + G+ L P G + Sbjct: 1455 PGPDGPPGPMG--PPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS 1512 Query: 108 APPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHP 165 P GE+ G +GPP PP PPG G K S G G HP Sbjct: 1513 GPK--GEQGITGPSGPIGPPGPPGLPG------PPGPKGAK--GSSGPTGPKGEAGHP 1560 Score = 34.3 bits (77), Expect = 0.40 Identities = 42/143 (29%), Positives = 49/143 (34%), Gaps = 18/143 (12%) Query: 17 PPPLKDESG-----GGGGPTVPPHQEAASGELRG-----GTERGPGRCAP--SAGSPA-A 63 PP + E G G GGP P GE +G G PGR P S G P Sbjct: 833 PPGPRGEDGPEGPKGRGGPNGDPGPLGPPGE-KGKLGVPGLPGYPGRQGPKGSIGFPGFP 891 Query: 64 AVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTE 123 E G GP+ Q RG G ++ PG + G + G E Sbjct: 892 GANGEKGGRGTPGKPGPRGQ--RGPTGPRGERGPRGITGKPGPKG--NSGGDGPAGPPGE 947 Query: 124 LGPPAPPRPRNGYQPHRPPGGGG 146 GP P P P PPG G Sbjct: 948 RGPNGPQGPTGFPGPKGPPGPPG 970 Score = 33.9 bits (76), Expect = 0.52 Identities = 44/173 (25%), Positives = 52/173 (30%), Gaps = 26/173 (15%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + L+ PP P G G PP +G++ ERGP P Sbjct: 457 EPAIIEPGMLIEGPPGP-----EGPAGLPGPPGTMGPTGQVGDPGERGP----PGRPGLP 507 Query: 63 AAVGRESP------------GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----R 106 A G P G S GP L P G Sbjct: 508 GADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLT 567 Query: 107 AAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGG 159 P VG GG E G P PR G Q P G G+R + + G G Sbjct: 568 GRPGPVGPPGSGGLKGEPGDVGPQGPR-GVQGPPGPAGKPGRRGRAGSDGARG 619 Score = 33.5 bits (75), Expect = 0.67 Identities = 35/135 (25%), Positives = 43/135 (31%), Gaps = 18/135 (13%) Query: 29 GPTVPPHQEAASGEL-RGGTERGPGRCAPSAGSPAAAV-------GRESPGAAATSSSGP 80 GP P ++ G RGG PG P V GR+ P + P Sbjct: 832 GPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFP 891 Query: 81 QAQQHRGG-------GPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133 A +GG GP+ Q + R G + GG GP PP R Sbjct: 892 GANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGD---GPAGPPGER 948 Query: 134 NGYQPHRPPGGGGGK 148 P P G G K Sbjct: 949 GPNGPQGPTGFPGPK 963 Score = 33.1 bits (74), Expect = 0.88 Identities = 37/135 (27%), Positives = 44/135 (32%), Gaps = 15/135 (11%) Query: 26 GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESP----GAAATSSSGPQ 81 G GP+ PP GE E GP R P P +G + P G + Q Sbjct: 646 GDPGPSGPPGPPGDDGERGDDGEVGP-RGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQ 704 Query: 82 AQQHRGGGPQAQS--------HGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133 GPQ + G L P G PP GE+ G G P P Sbjct: 705 PGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPP--GEKGPLGKPGLPGMPGADGPP 762 Query: 134 NGYQPHRPPGGGGGK 148 PPG GG+ Sbjct: 763 GHPGKEGPPGEKGGQ 777 >gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 preproprotein [Homo sapiens] Length = 178 Score = 51.6 bits (122), Expect = 2e-06 Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 8/144 (5%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGG-GPTVPPHQEAASGELRGGTERGPGRCAPSAGSP 61 +++ E+ P L+ P + G GP PP + G +GP G P Sbjct: 22 DVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 81 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLS-DPPGRAAPPDVGEERRGGG 120 SP + GP Q + GP AQ +++ + PPG+ P E G Sbjct: 82 PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQE-----G 136 Query: 121 GTELGPPAPPRPRNGYQPHRPPGG 144 GPP PP N QP PP G Sbjct: 137 NNPQGPP-PPAGGNPQQPQAPPAG 159 Score = 36.6 bits (83), Expect = 0.080 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 20/100 (20%) Query: 68 ESPGAAATSSSGPQAQQHRGG--------------GPQAQSHGEARLSDPPGRA-APPDV 112 ESP A + GP Q GG GP Q + + PPG+ PP Sbjct: 27 ESPSLIAGNPQGPSPQ---GGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 83 Query: 113 GEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNS 152 G++ R G P P P+ G +P PP GG K +++ Sbjct: 84 GDKSRSPRSPP-GKPQGPPPQGG-KPQGPPAQGGSKSQSA 121 >gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 preproprotein [Homo sapiens] Length = 198 Score = 51.2 bits (121), Expect = 3e-06 Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 2/147 (1%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGG-GPTVPPHQEAASGELRGGTERGPGRCAPSAGSP 61 +++ E+ P L+ P + G GP PP + G +GP G P Sbjct: 22 DVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 81 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGR-AAPPDVGEERRGGG 120 SP + GP Q + GP Q + + PPG+ PP G + Sbjct: 82 PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSA 141 Query: 121 GTELGPPAPPRPRNGYQPHRPPGGGGG 147 + G P P + G P PP GG Sbjct: 142 RSPPGKPQGPPQQEGNNPQGPPPPAGG 168 Score = 45.1 bits (105), Expect = 2e-04 Identities = 40/135 (29%), Positives = 49/135 (36%), Gaps = 12/135 (8%) Query: 16 PPPPLKDESG---GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 PPPP K + GG P PP G G + R P G + G Sbjct: 51 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGP 110 Query: 73 AATSSSGPQAQQHRG--GGPQAQSHGEARLS-DPPGRAAPPDVGEERRGGGGTELGPPAP 129 + PQ G GP AQ +++ + PPG+ P E G GPP P Sbjct: 111 PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQE-----GNNPQGPP-P 164 Query: 130 PRPRNGYQPHRPPGG 144 P N QP PP G Sbjct: 165 PAGGNPQQPQAPPAG 179 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 50.8 bits (120), Expect = 4e-06 Identities = 93/372 (25%), Positives = 131/372 (35%), Gaps = 84/372 (22%) Query: 19 PLKDESGGGGGPTVPPHQEAASGELRGGT-ERGPGRCAPSA--GSPAAAVGRESPG---- 71 PL + +GG GG T+P A GT R P P++ G A SPG Sbjct: 57 PLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSS 116 Query: 72 ---AAATSSSGPQAQQ----------HRGGGPQAQ-----SHGEARLSDPPGRAAPPDVG 113 A+ T+ GP Q+ RG +A S G R + P P Sbjct: 117 PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176 Query: 114 EERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRV 173 R GTE+G PRP +P RPP G K +S + P+ RRR Sbjct: 177 ARRSRAAGTEVG---LPRPAPSARP-RPPTEGPRKSVSSAS----EHSTTEPSPAARRRP 228 Query: 174 NSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPK 233 ++ P++ L + PL+ + T A S P P KG ++ L P Sbjct: 229 SAGGGLQRPASRSLSSSA-TPLSSPARSGPSARGTPRAPAHPSQPKP-KG---LQALRPP 283 Query: 234 DITDPLSLNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPL 293 +T P + +SPL T + G+++ PVPP Sbjct: 284 QVTPP--RKDAAPALGPLSSSPLAT---------------PSPSGTKARPVPPP------ 320 Query: 294 LHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSG-----SLSAPPA 348 N P P L + + +PLP A PS +L +PPA Sbjct: 321 --------------DNAATPLPATLPPS----PPLATPLPLAPPSPSAPPSLQTLPSPPA 362 Query: 349 ASVISAPPSSSS 360 APPS ++ Sbjct: 363 TPPSQAPPSMTT 374 Score = 36.6 bits (83), Expect = 0.080 Identities = 44/166 (26%), Positives = 57/166 (34%), Gaps = 35/166 (21%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASG---ELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 PPPP + S GP + H +A+ ELR G + GP A ++ P A + P A Sbjct: 881 PPPPSRSPSSTLSGPDLAGHSSSATSTPEELR-GYDSGPEGGAAASPPPDAELAACHPAA 939 Query: 73 AATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGG-------GGTELG 125 + + P A + G P PP G G G E Sbjct: 940 WSRGPAPPLAFRGAPGAPLPW---------------PPATGPGSADGLCTIYETEGPESA 984 Query: 126 PPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRR 171 PAP P PG GGK G G G + K+ R Sbjct: 985 TPAP----GALDPGPSPGTSGGKA-----AAGAGAGASSRSPKQAR 1021 Score = 33.5 bits (75), Expect = 0.67 Identities = 38/146 (26%), Positives = 49/146 (33%), Gaps = 16/146 (10%) Query: 10 PFLVPAPPP--PLKDESGGGGGPTVPPHQEAASG-ELRGGTERGPGRCAPSAGSPAAAVG 66 P P PP P K S T P A GG +R R S+ +P ++ Sbjct: 194 PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 253 Query: 67 RESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGE------ERRGGG 120 R P A T + Q + G QA + PP + A P +G Sbjct: 254 RSGPSARGTPRAPAHPSQPKPKGLQALRPPQV---TPPRKDAAPALGPLSSSPLATPSPS 310 Query: 121 GTELGPPAPP----RPRNGYQPHRPP 142 GT+ P PP P P PP Sbjct: 311 GTKARPVPPPDNAATPLPATLPPSPP 336 Score = 29.6 bits (65), Expect = 9.7 Identities = 44/155 (28%), Positives = 55/155 (35%), Gaps = 39/155 (25%) Query: 277 GGSESHPVPPTAPLT---PLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRD------- 326 GG+ + P PP A L P G + RG AP P+ T D Sbjct: 920 GGAAASP-PPDAELAACHPAAWSRGPAPPLAFRGAP-GAPLPWPPATGPGSADGLCTIYE 977 Query: 327 ----EVVSPLPSALQ-GPSGSLSAPPAASVISAPPSSSSRHRKR---------------- 365 E +P P AL GPS S AA+ A SS S + R Sbjct: 978 TEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQH 1037 Query: 366 --RRT----SSKSEAGARGGGQGSKEKGRGSWGGR 394 RT +++ AG GGG G E G + G R Sbjct: 1038 LLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGAR 1072 >gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo sapiens] Length = 1650 Score = 50.8 bits (120), Expect = 4e-06 Identities = 46/143 (32%), Positives = 53/143 (37%), Gaps = 21/143 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 PA PP + E G G P + + G PG P G P AA PGA Sbjct: 987 PAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGP-VGQPGAAGADGEPGAR 1045 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTELGPPAP 129 GPQ G G + PPG + P GE+ G +GPP P Sbjct: 1046 -----GPQGHFGAKG-----DEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1095 Query: 130 PRPR-----NGYQ-PHRPPGGGG 146 P PR NG P PPGG G Sbjct: 1096 PGPRGPAGPNGADGPQGPPGGVG 1118 Score = 49.7 bits (117), Expect = 9e-06 Identities = 44/147 (29%), Positives = 55/147 (37%), Gaps = 31/147 (21%) Query: 14 PAPPPPLKDESGGGG-----------GPTVPPHQEAASGEL-RGGTERGPGRCAPSAGSP 61 P PP + G G GP PP ++ G + GT+ PG P Sbjct: 834 PPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPG--------P 885 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG 121 A G++ P A G + GGP + G S PPG A P GE G G Sbjct: 886 PGAPGKDGP-AGLRGFPGERGLPGTAGGPGLK--GNEGPSGPPGPAGSP--GERGAAGSG 940 Query: 122 TELGPPAPPRPRNGYQPHRPPGGGGGK 148 +GPP P P+ PPG G K Sbjct: 941 GPIGPPGRPGPQG------PPGAAGEK 961 Score = 39.3 bits (90), Expect = 0.012 Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 24/154 (15%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERG-PGRCAPSA-GSPAAAVGRESPGAA 73 P PP G GGP Q+ A G+ E G PG P+ P +G+ P A Sbjct: 1189 PGPP------GEGGPR---GQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP-AG 1238 Query: 74 ATSSSGPQAQQHRGGGPQAQSH-------GEARLSDPPG----RAAPPDVGEERRGGGGT 122 + S G Q + G P A G A + PG R P VG++ R G Sbjct: 1239 SPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1298 Query: 123 ELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVG 156 + GPP P P G R G G++ + +G Sbjct: 1299 QAGPPGPVGP-PGLPGLRGDAGAKGEKGHPGLIG 1331 Score = 36.6 bits (83), Expect = 0.080 Identities = 56/185 (30%), Positives = 65/185 (35%), Gaps = 29/185 (15%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + LV PP P G G PP + G + ERGP A GS Sbjct: 301 EPAVLEPGMLVEGPPGP-----EGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDG 355 Query: 63 AAVGRESPGAAATSSSGPQAQQHRGG--GP-----QAQSHG---EARLS--DPPG----R 106 A PG TS P GG GP +AQ+ +ARL+ PPG Sbjct: 356 A------PGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYT 409 Query: 107 AAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPA 166 P +G+ G E G P PR PPG G RR G G P Sbjct: 410 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAG--RRGRAGADGARGMPGDPG 467 Query: 167 FKRRR 171 K R Sbjct: 468 VKGDR 472 Score = 34.3 bits (77), Expect = 0.40 Identities = 44/152 (28%), Positives = 54/152 (35%), Gaps = 34/152 (22%) Query: 14 PAPPPPL----------KDESGGGGGPTVPPHQEAASGELRGGT-ERG-PGRCAPSAGSP 61 P PP P K+ + G GP P ++ +G LRG ERG PG +AG P Sbjct: 859 PGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAG-LRGFPGERGLPG----TAGGP 913 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG 121 G E P + P + G G G PPG A V E+ Sbjct: 914 GLK-GNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEK----- 967 Query: 122 TELGPPAPPRPRNGYQ-------PHRPPGGGG 146 P P R+G Q P PPG G Sbjct: 968 ----GPIGPTGRDGVQGPVGLPGPAGPPGVAG 995 Score = 34.3 bits (77), Expect = 0.40 Identities = 36/136 (26%), Positives = 47/136 (34%), Gaps = 21/136 (15%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESP----- 70 PP P+ G G P ++ +G++ GP P PA G + P Sbjct: 1065 PPGPI-----GLQGLPGPSGEKGETGDVGPMGPPGP----PGPRGPAGPNGADGPQGPPG 1115 Query: 71 GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPP 130 G G + + G P Q GE + P G GE+ G E GPP P Sbjct: 1116 GVGNLGPPGEKGEPGESGSPGIQ--GEPGVKGPRGER-----GEKGESGQPGEPGPPGPK 1168 Query: 131 RPRNGYQPHRPPGGGG 146 P P PG G Sbjct: 1169 GPTGDDGPKGNPGPVG 1184 Score = 30.4 bits (67), Expect = 5.7 Identities = 36/132 (27%), Positives = 43/132 (32%), Gaps = 20/132 (15%) Query: 17 PPPLKDESGGGGGPTVP--PHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA 74 PP L E G G P +P P ++ G L PG S A + +S Sbjct: 699 PPGLMGEKGKLGVPGLPGYPGRQGPKGSLGF-----PGFPGASGEKGARGLSGKSGPRGE 753 Query: 75 TSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRN 134 +GP+ Q RG G S G PP E G P P P Sbjct: 754 RGPTGPRGQ--RGPRGATGKSGAKGTSGGDGPHGPPG-----------ERGLPGPQGPNG 800 Query: 135 GYQPHRPPGGGG 146 P PPG G Sbjct: 801 FPGPKGPPGPPG 812 >gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo sapiens] Length = 1629 Score = 50.8 bits (120), Expect = 4e-06 Identities = 46/143 (32%), Positives = 53/143 (37%), Gaps = 21/143 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 PA PP + E G G P + + G PG P G P AA PGA Sbjct: 966 PAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGP-VGQPGAAGADGEPGAR 1024 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTELGPPAP 129 GPQ G G + PPG + P GE+ G +GPP P Sbjct: 1025 -----GPQGHFGAKG-----DEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1074 Query: 130 PRPR-----NGYQ-PHRPPGGGG 146 P PR NG P PPGG G Sbjct: 1075 PGPRGPAGPNGADGPQGPPGGVG 1097 Score = 49.7 bits (117), Expect = 9e-06 Identities = 44/147 (29%), Positives = 55/147 (37%), Gaps = 31/147 (21%) Query: 14 PAPPPPLKDESGGGG-----------GPTVPPHQEAASGEL-RGGTERGPGRCAPSAGSP 61 P PP + G G GP PP ++ G + GT+ PG P Sbjct: 813 PPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPG--------P 864 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG 121 A G++ P A G + GGP + G S PPG A P GE G G Sbjct: 865 PGAPGKDGP-AGLRGFPGERGLPGTAGGPGLK--GNEGPSGPPGPAGSP--GERGAAGSG 919 Query: 122 TELGPPAPPRPRNGYQPHRPPGGGGGK 148 +GPP P P+ PPG G K Sbjct: 920 GPIGPPGRPGPQG------PPGAAGEK 940 Score = 39.3 bits (90), Expect = 0.012 Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 24/154 (15%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERG-PGRCAPSA-GSPAAAVGRESPGAA 73 P PP G GGP Q+ A G+ E G PG P+ P +G+ P A Sbjct: 1168 PGPP------GEGGPR---GQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP-AG 1217 Query: 74 ATSSSGPQAQQHRGGGPQAQSH-------GEARLSDPPG----RAAPPDVGEERRGGGGT 122 + S G Q + G P A G A + PG R P VG++ R G Sbjct: 1218 SPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1277 Query: 123 ELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVG 156 + GPP P P G R G G++ + +G Sbjct: 1278 QAGPPGPVGP-PGLPGLRGDAGAKGEKGHPGLIG 1310 Score = 36.6 bits (83), Expect = 0.080 Identities = 56/185 (30%), Positives = 65/185 (35%), Gaps = 29/185 (15%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + LV PP P G G PP + G + ERGP A GS Sbjct: 280 EPAVLEPGMLVEGPPGP-----EGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDG 334 Query: 63 AAVGRESPGAAATSSSGPQAQQHRGG--GP-----QAQSHG---EARLS--DPPG----R 106 A PG TS P GG GP +AQ+ +ARL+ PPG Sbjct: 335 A------PGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYT 388 Query: 107 AAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPA 166 P +G+ G E G P PR PPG G RR G G P Sbjct: 389 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAG--RRGRAGADGARGMPGDPG 446 Query: 167 FKRRR 171 K R Sbjct: 447 VKGDR 451 Score = 34.3 bits (77), Expect = 0.40 Identities = 44/152 (28%), Positives = 54/152 (35%), Gaps = 34/152 (22%) Query: 14 PAPPPPL----------KDESGGGGGPTVPPHQEAASGELRGGT-ERG-PGRCAPSAGSP 61 P PP P K+ + G GP P ++ +G LRG ERG PG +AG P Sbjct: 838 PGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAG-LRGFPGERGLPG----TAGGP 892 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG 121 G E P + P + G G G PPG A V E+ Sbjct: 893 GLK-GNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEK----- 946 Query: 122 TELGPPAPPRPRNGYQ-------PHRPPGGGG 146 P P R+G Q P PPG G Sbjct: 947 ----GPIGPTGRDGVQGPVGLPGPAGPPGVAG 974 Score = 34.3 bits (77), Expect = 0.40 Identities = 36/136 (26%), Positives = 47/136 (34%), Gaps = 21/136 (15%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESP----- 70 PP P+ G G P ++ +G++ GP P PA G + P Sbjct: 1044 PPGPI-----GLQGLPGPSGEKGETGDVGPMGPPGP----PGPRGPAGPNGADGPQGPPG 1094 Query: 71 GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPP 130 G G + + G P Q GE + P G GE+ G E GPP P Sbjct: 1095 GVGNLGPPGEKGEPGESGSPGIQ--GEPGVKGPRGER-----GEKGESGQPGEPGPPGPK 1147 Query: 131 RPRNGYQPHRPPGGGG 146 P P PG G Sbjct: 1148 GPTGDDGPKGNPGPVG 1163 Score = 30.4 bits (67), Expect = 5.7 Identities = 36/132 (27%), Positives = 43/132 (32%), Gaps = 20/132 (15%) Query: 17 PPPLKDESGGGGGPTVP--PHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA 74 PP L E G G P +P P ++ G L PG S A + +S Sbjct: 678 PPGLMGEKGKLGVPGLPGYPGRQGPKGSLGF-----PGFPGASGEKGARGLSGKSGPRGE 732 Query: 75 TSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRN 134 +GP+ Q RG G S G PP E G P P P Sbjct: 733 RGPTGPRGQ--RGPRGATGKSGAKGTSGGDGPHGPPG-----------ERGLPGPQGPNG 779 Query: 135 GYQPHRPPGGGG 146 P PPG G Sbjct: 780 FPGPKGPPGPPG 791 >gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo sapiens] Length = 1736 Score = 50.8 bits (120), Expect = 4e-06 Identities = 46/143 (32%), Positives = 53/143 (37%), Gaps = 21/143 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 PA PP + E G G P + + G PG P G P AA PGA Sbjct: 1073 PAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGP-VGQPGAAGADGEPGAR 1131 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTELGPPAP 129 GPQ G G + PPG + P GE+ G +GPP P Sbjct: 1132 -----GPQGHFGAKG-----DEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP 1181 Query: 130 PRPR-----NGYQ-PHRPPGGGG 146 P PR NG P PPGG G Sbjct: 1182 PGPRGPAGPNGADGPQGPPGGVG 1204 Score = 49.7 bits (117), Expect = 9e-06 Identities = 44/147 (29%), Positives = 55/147 (37%), Gaps = 31/147 (21%) Query: 14 PAPPPPLKDESGGGG-----------GPTVPPHQEAASGEL-RGGTERGPGRCAPSAGSP 61 P PP + G G GP PP ++ G + GT+ PG P Sbjct: 920 PPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPG--------P 971 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG 121 A G++ P A G + GGP + G S PPG A P GE G G Sbjct: 972 PGAPGKDGP-AGLRGFPGERGLPGTAGGPGLK--GNEGPSGPPGPAGSP--GERGAAGSG 1026 Query: 122 TELGPPAPPRPRNGYQPHRPPGGGGGK 148 +GPP P P+ PPG G K Sbjct: 1027 GPIGPPGRPGPQG------PPGAAGEK 1047 Score = 39.3 bits (90), Expect = 0.012 Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 24/154 (15%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERG-PGRCAPSA-GSPAAAVGRESPGAA 73 P PP G GGP Q+ A G+ E G PG P+ P +G+ P A Sbjct: 1275 PGPP------GEGGPR---GQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGP-AG 1324 Query: 74 ATSSSGPQAQQHRGGGPQAQSH-------GEARLSDPPG----RAAPPDVGEERRGGGGT 122 + S G Q + G P A G A + PG R P VG++ R G Sbjct: 1325 SPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRPGATG 1384 Query: 123 ELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVG 156 + GPP P P G R G G++ + +G Sbjct: 1385 QAGPPGPVGP-PGLPGLRGDAGAKGEKGHPGLIG 1417 Score = 36.6 bits (83), Expect = 0.080 Identities = 56/185 (30%), Positives = 65/185 (35%), Gaps = 29/185 (15%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + LV PP P G G PP + G + ERGP A GS Sbjct: 387 EPAVLEPGMLVEGPPGP-----EGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDG 441 Query: 63 AAVGRESPGAAATSSSGPQAQQHRGG--GP-----QAQSHG---EARLS--DPPG----R 106 A PG TS P GG GP +AQ+ +ARL+ PPG Sbjct: 442 A------PGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYT 495 Query: 107 AAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPA 166 P +G+ G E G P PR PPG G RR G G P Sbjct: 496 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAG--RRGRAGADGARGMPGDPG 553 Query: 167 FKRRR 171 K R Sbjct: 554 VKGDR 558 Score = 35.0 bits (79), Expect = 0.23 Identities = 47/163 (28%), Positives = 58/163 (35%), Gaps = 34/163 (20%) Query: 7 EKEPFLVPAPPPPLKDESGGGGGPTVPP-----HQEAASGELRGGTERGPGRCAPSAGSP 61 E+ VP + E G GG T PP + + R TE GP A +A S Sbjct: 314 EQTDLQVPPTADRFQAEEYGEGG-TDPPEGPYDYTYGYGDDYREETELGPALSAETAHSG 372 Query: 62 AAAVGRE------------SPGAAATSSSGPQAQQHRGGGPQAQSH----GEARLSDPPG 105 AAA G PG GP+ G P Q + G+ PPG Sbjct: 373 AAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPG 432 Query: 106 RAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGK 148 RA P G++ G P PP + P R GGG K Sbjct: 433 RAGLP----------GSD-GAPGPP-GTSLMLPFRFGSGGGDK 463 Score = 34.3 bits (77), Expect = 0.40 Identities = 44/152 (28%), Positives = 54/152 (35%), Gaps = 34/152 (22%) Query: 14 PAPPPPL----------KDESGGGGGPTVPPHQEAASGELRGGT-ERG-PGRCAPSAGSP 61 P PP P K+ + G GP P ++ +G LRG ERG PG +AG P Sbjct: 945 PGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAG-LRGFPGERGLPG----TAGGP 999 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGG 121 G E P + P + G G G PPG A V E+ Sbjct: 1000 GLK-GNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEK----- 1053 Query: 122 TELGPPAPPRPRNGYQ-------PHRPPGGGG 146 P P R+G Q P PPG G Sbjct: 1054 ----GPIGPTGRDGVQGPVGLPGPAGPPGVAG 1081 Score = 34.3 bits (77), Expect = 0.40 Identities = 36/136 (26%), Positives = 47/136 (34%), Gaps = 21/136 (15%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESP----- 70 PP P+ G G P ++ +G++ GP P PA G + P Sbjct: 1151 PPGPI-----GLQGLPGPSGEKGETGDVGPMGPPGP----PGPRGPAGPNGADGPQGPPG 1201 Query: 71 GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPP 130 G G + + G P Q GE + P G GE+ G E GPP P Sbjct: 1202 GVGNLGPPGEKGEPGESGSPGIQ--GEPGVKGPRGER-----GEKGESGQPGEPGPPGPK 1254 Query: 131 RPRNGYQPHRPPGGGG 146 P P PG G Sbjct: 1255 GPTGDDGPKGNPGPVG 1270 Score = 30.4 bits (67), Expect = 5.7 Identities = 36/132 (27%), Positives = 43/132 (32%), Gaps = 20/132 (15%) Query: 17 PPPLKDESGGGGGPTVP--PHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA 74 PP L E G G P +P P ++ G L PG S A + +S Sbjct: 785 PPGLMGEKGKLGVPGLPGYPGRQGPKGSLGF-----PGFPGASGEKGARGLSGKSGPRGE 839 Query: 75 TSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRN 134 +GP+ Q RG G S G PP E G P P P Sbjct: 840 RGPTGPRGQ--RGPRGATGKSGAKGTSGGDGPHGPPG-----------ERGLPGPQGPNG 886 Query: 135 GYQPHRPPGGGG 146 P PPG G Sbjct: 887 FPGPKGPPGPPG 898 >gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens] Length = 2161 Score = 50.4 bits (119), Expect = 5e-06 Identities = 53/171 (30%), Positives = 61/171 (35%), Gaps = 45/171 (26%) Query: 10 PFLVPAPPPPLKDESGGGGGPT----VPPHQEAASGELRGGTERGPG----RCAPSAGSP 61 P L P P L+ GGG PT P H +A G GG+ +GP + P A S Sbjct: 1037 PRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG--GGGSSQGPALRYFQLPPRAASA 1094 Query: 62 AAAV------GRESPGAAATSSSGPQAQQHRGGG--PQAQSHGEARLSDPPGRAAP---- 109 A V GR+ P T G + +GGG P A PP AAP Sbjct: 1095 AMYVPARSGRGRKGPLVKQTKVEG---EPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKN 1151 Query: 110 -----------PDVGEERRG--GGGTELGPPAPPRPRNGYQPHRPPGGGGG 147 P R G TE PP P P G GGGGG Sbjct: 1152 SIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGG-------GGGGG 1195 Score = 48.1 bits (113), Expect = 3e-05 Identities = 99/387 (25%), Positives = 132/387 (34%), Gaps = 73/387 (18%) Query: 15 APPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA 74 A PP + +GGGGG P A + P +PS PA GAA Sbjct: 1179 AEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPSPSPVPTPASPS--GPATLDFTSQFGAAL 1236 Query: 75 TSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRN 134 ++ R GG Q ++ + L D G+E G GG LG A P PR Sbjct: 1237 VGAA------RREGGWQNEARRRSTL------FLSTDAGDEDGGDGG--LGTGAAPGPRL 1282 Query: 135 GYQPHRPPG-----------------GGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDC 177 + G G GG S GGGGG +F R Sbjct: 1283 RHSKSIDEGMFSAEPYLRLESAGSGAGYGGYGAGSRAYGGGGGSSAFTSFLPPR------ 1336 Query: 178 DSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPKDITD 237 P L G DP + L R L + R P P+ Sbjct: 1337 ----PLVHPLTGKALDPASPLGLALAARERALKESSEGGGAPQPPPRPP----SPRYEAP 1388 Query: 238 PLSLNTCTDEGH--VVL----ASPLKTGRKRHRHRGQHHQQQQ-------AAGGSESHPV 284 P + + + H VL ASP R+ +R Q++ AA S H + Sbjct: 1389 PPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRL 1448 Query: 285 PPTAP-LTPLLHGEGASQQPRHRGQNRD----APQ-----PYELNTAINCRDEVVSPLPS 334 PPTAP + PLL G H G ++ AP+ P + NC+ +P+ S Sbjct: 1449 PPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPR--APVTS 1506 Query: 335 ALQGPS-GSLSAPPAASVISAPPSSSS 360 PS PP + S PPS +S Sbjct: 1507 GRGPPSEDGPGVPPPSPRRSVPPSPTS 1533 Score = 42.7 bits (99), Expect = 0.001 Identities = 94/440 (21%), Positives = 140/440 (31%), Gaps = 79/440 (17%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAP-SAGSPAAAVGRESPGAAA 74 PPP P VP + RGG PG P A SPA+ G P Sbjct: 922 PPPTTSPPEPPYSTPPVPSSSGRLTPSPRGGPFN-PGSGGPLPASSPASFDGPSPPDTRV 980 Query: 75 TSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRA---APPDVGEERRGGGGTELGPPAPPR 131 S ++ H G P A H PP APP PP PP Sbjct: 981 GSRE--KSLYHSGPLPPAHHH-------PPHHHHHHAPPPQPHHHHAH------PPHPPE 1025 Query: 132 PRNGYQPHRPP---------------GG------GGGKRRNSCNVGGGGGGFKHPAFKRR 170 G P PP GG G + + GGGGG + PA + Sbjct: 1026 METGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYF 1085 Query: 171 RRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEIL 230 + + + G PL + ++ E + S PA + P + Sbjct: 1086 QLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVA 1145 Query: 231 IPKDITDPLSLNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPL 290 P + + + + T +++ +P + R ++ GS + PPT P Sbjct: 1146 APSE-KNSIPIPT------IIIKAPSTSSSGR------------SSQGSSTEAEPPTQPE 1186 Query: 291 TPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSG-SLSAPPAA 349 G G S + P P + P P++ GP+ ++ A Sbjct: 1187 PTGGGGGGGSSPSPAPAMSPVPPSPSPV------------PTPASPSGPATLDFTSQFGA 1234 Query: 350 SVISAPPSSSSRHRKRRRTSS---KSEAGARGGGQGSKEKGRGSWGGRHHHHHPLPAAGF 406 +++ A + RR S+ ++AG GG G G G R H + F Sbjct: 1235 ALVGAARREGGWQNEARRRSTLFLSTDAGDEDGGDGGLGTGAAP-GPRLRHSKSIDEGMF 1293 Query: 407 KKQQ--RKFQYGNYCKYYGY 424 + R G+ Y GY Sbjct: 1294 SAEPYLRLESAGSGAGYGGY 1313 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 50.1 bits (118), Expect = 7e-06 Identities = 37/133 (27%), Positives = 50/133 (37%), Gaps = 15/133 (11%) Query: 16 PPPPLKDESG---GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRES--P 70 PPPP K + GG P PP G +GP + SP + G+ P Sbjct: 72 PPPPGKPQGPPPQGGNKPQGPPPP---------GKPQGPPPQGDKSRSPRSPPGKPQGPP 122 Query: 71 GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGR-AAPPDVGEERRGGGGTELGPPAP 129 GP + GP Q + + PPG+ PP G+ + + G P Sbjct: 123 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG 182 Query: 130 PRPRNGYQPHRPP 142 P P+ G QP PP Sbjct: 183 PPPQGGNQPQGPP 195 Score = 46.2 bits (108), Expect = 1e-04 Identities = 41/155 (26%), Positives = 54/155 (34%), Gaps = 31/155 (20%) Query: 16 PPPPLKDESG---GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 PPPP K + GG P PP G+ +G +G + + P G P Sbjct: 195 PPPPGKPQGPPPQGGNKPQGPP----PPGKPQGPPPQGDNKSQSARSPPGKPQG--PPPQ 248 Query: 73 AATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGR--AAPPDVGEERRG------------ 118 GP + GP Q + + PPG+ PP G + R Sbjct: 249 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPP 308 Query: 119 --GGGTELGPPAPPR------PRNGYQPHRPPGGG 145 GG GPP PP P+ G +P PP G Sbjct: 309 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 343 Score = 46.2 bits (108), Expect = 1e-04 Identities = 39/155 (25%), Positives = 52/155 (33%), Gaps = 11/155 (7%) Query: 16 PPPPLKDESG---GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 PPPP K + GG P PP G+ +G +G + S P G P Sbjct: 257 PPPPGKPQGPPPQGGNKPQGPP----PPGKPQGPPPQGGSKSRSSRSPPGKPQG--PPPQ 310 Query: 73 AATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGR--AAPPDVGEERRGGGGTELGPPAPP 130 GP + GP Q + + PPG+ PP G + R P PP Sbjct: 311 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPP 370 Query: 131 RPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHP 165 + PP GG ++ G G P Sbjct: 371 QQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 405 Score = 45.8 bits (107), Expect = 1e-04 Identities = 41/155 (26%), Positives = 54/155 (34%), Gaps = 31/155 (20%) Query: 16 PPPPLKDESG---GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 PPPP K + GG P PP G+ +G +G + S P G P Sbjct: 133 PPPPGKPQGPPPQGGNKPQGPP----PPGKPQGPPPQGDNKSRSSRSPPGKPQG--PPPQ 186 Query: 73 AATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRA-APPDVGEERRG------------- 118 GP + GP Q + + PPG+ PP G+ + Sbjct: 187 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPP 246 Query: 119 --GGGTELGPPAPPR------PRNGYQPHRPPGGG 145 GG GPP PP P+ G +P PP G Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 281 Score = 42.0 bits (97), Expect = 0.002 Identities = 37/145 (25%), Positives = 50/145 (34%), Gaps = 11/145 (7%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGG-GPTVPPHQEAASGELRGGTERGPGRCAPSAGSP 61 +++ E+ P L+ P + G GP PP + G +GP P G P Sbjct: 22 DVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGP---PPPPGKP 78 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRA-APPDVGEERRGGG 120 P GP + GP Q PPG+ PP G + G Sbjct: 79 QGP-----PPQGGNKPQGPPPPG-KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP 132 Query: 121 GTELGPPAPPRPRNGYQPHRPPGGG 145 G P P P+ G +P PP G Sbjct: 133 PPPPGKPQGPPPQGGNKPQGPPPPG 157 Score = 33.5 bits (75), Expect = 0.67 Identities = 34/134 (25%), Positives = 39/134 (29%), Gaps = 8/134 (5%) Query: 277 GGSESHPVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSAL 336 G P PP P P G+ SQ R P P N P Sbjct: 209 GNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 268 Query: 337 QGPSGSLSAPPAASVISAPPSSSSRHRKRRRTSSKSEAGARGGG---QG-----SKEKGR 388 QG + PP PP S+ R R K + GG QG K +G Sbjct: 269 QGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 328 Query: 389 GSWGGRHHHHHPLP 402 GG P P Sbjct: 329 PPQGGNKPQGPPPP 342 Score = 29.6 bits (65), Expect = 9.7 Identities = 29/129 (22%), Positives = 38/129 (29%), Gaps = 2/129 (1%) Query: 277 GGSESHPVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSAL 336 G P PP P P G S+ R P P N P Sbjct: 271 GNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330 Query: 337 QGPSGSLSAPPAASVISAPPSSSSRHRKRRRTSSKSEAGARGGGQGSKEKGRGSWGGRHH 396 QG + PP PP S+ R R K + + +G+ +G G + Sbjct: 331 QGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQ--QEGNNPQGPPPPAGGNP 388 Query: 397 HHHPLPAAG 405 P AG Sbjct: 389 QQPQAPPAG 397 >gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] Length = 753 Score = 49.7 bits (117), Expect = 9e-06 Identities = 57/234 (24%), Positives = 86/234 (36%), Gaps = 26/234 (11%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAAT 75 P PP SGGGGG + ++S GG G G+ + + ++V +SP A Sbjct: 388 PRPPSVQPSGGGGGGSGGGGSSSSSNSSAGG---GAGK--QNGATSYSSVVADSPAEVAL 442 Query: 76 SSSGPQAQQHRGGGPQAQSHGEA-RLSDPPGRAAPPDVGEERRGGGGTELGP----PAPP 130 SSSG + GP + H S P AAP G G G GP P P Sbjct: 443 SSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPV 502 Query: 131 RPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRVNSDCDSVLPSNFLLGGN 190 P P P + + G P K ++S + + Sbjct: 503 NP-----PSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSS--LKSMAERAAISSG 555 Query: 191 IFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPKDITDPLSLNTC 244 I DP+ L + ++ + +S PA + P+++ ++ PLSL C Sbjct: 556 IEDPVPTLHLTERDIILS------STSAPPASAQPPLQL---SEVNIPLSLGVC 600 Score = 43.1 bits (100), Expect = 9e-04 Identities = 54/202 (26%), Positives = 70/202 (34%), Gaps = 35/202 (17%) Query: 198 NSLLDEEV---SRTLNAETPKSSPLPAKGRDPVEILIPKDITDPLSLNTCTDEGHVVLAS 254 +S +++E+ S + T SSP+P + ++ D TD V S Sbjct: 246 HSHMEDEIFNQSSSTPTSTTSSSPIPPSPAN----CTTENSEDDKKRGRSTDSE--VSQS 299 Query: 255 PLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQ 314 P K G K H QH Q S VPPT P P S P + G A Sbjct: 300 PAKNGSKPV-HSNQHPQ---------SPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAP 349 Query: 315 PYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSRHRKRRRTSSKSEA 374 P L P A PS + P + APP+ S + R S + Sbjct: 350 PSALG-------------PKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPS 396 Query: 375 GARGGGQ---GSKEKGRGSWGG 393 G GGG GS S GG Sbjct: 397 GGGGGGSGGGGSSSSSNSSAGG 418 Score = 35.4 bits (80), Expect = 0.18 Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 30/133 (22%) Query: 30 PTVPPHQEAASGELRGGTERGPG-RCAPSAGSPAAAVGRESPGAAATSSSGPQAQQHRGG 88 P VPP + PG P+ +P +A+G ++ A + +S P Sbjct: 317 PAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPAPSHNSGTP-------- 368 Query: 89 GPQAQSHGEARLSDP-PGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGG 147 P AQ+ S P + PP V GGGG+ GGGG Sbjct: 369 APYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGS--------------------GGGGS 408 Query: 148 KRRNSCNVGGGGG 160 ++ + GGG G Sbjct: 409 SSSSNSSAGGGAG 421 >gi|13994287 BTE-binding protein 4 [Homo sapiens] Length = 252 Score = 49.3 bits (116), Expect = 1e-05 Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAAS--GELRGGTERGPGRCAPSAGSPAAAVGRESPG 71 P PPPP SG G G PH AAS +LRGG PG +P++ S AA+ S G Sbjct: 56 PGPPPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPASSSSAAS--SPSSG 113 Query: 72 AAATSSSGPQAQQHR 86 A ++ A+ HR Sbjct: 114 RAPGAAPSAAAKSHR 128 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 49.3 bits (116), Expect = 1e-05 Identities = 37/123 (30%), Positives = 44/123 (35%), Gaps = 11/123 (8%) Query: 6 AEKEPFLVPAPPPPLKDESGGGGG----------PTVPPHQEAASGELRGGTERGPGRCA 55 AE P P PPP + GGGG P VP + +LR E G CA Sbjct: 79 AEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCA 138 Query: 56 PSAGSPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEE 115 P + A A G E A +GP A R G G PG+ A P + Sbjct: 139 PVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGP-GPGPGKPAGPGAAQT 197 Query: 116 RRG 118 G Sbjct: 198 LNG 200 Score = 48.9 bits (115), Expect = 2e-05 Identities = 44/151 (29%), Positives = 58/151 (38%), Gaps = 16/151 (10%) Query: 6 AEKEPFLVPAPPPPL-----KDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGS 60 A P P PPPP + G PT P + GG+ AP+AG Sbjct: 262 APAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGG 321 Query: 61 PAAAVGRESPGAAATS-SSGPQAQQHR----GGGPQAQSHGEARLSDPPGRAAPPDVGEE 115 PA G+ PGAAA + + G +A+ + P AQ+ S P AA +G Sbjct: 322 PAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQT---LAASGPASTAASMVIGPT 378 Query: 116 RRGGGGTELGPPAPPRPRNGYQPHRPPGGGG 146 +G + P A P P G P G G Sbjct: 379 MQGALPS---PAAVPPPAPGTPTGLPKGAAG 406 Score = 38.1 bits (87), Expect = 0.027 Identities = 42/140 (30%), Positives = 50/140 (35%), Gaps = 23/140 (16%) Query: 30 PTVPPHQEAASGELRGGT-------ERGPGRCAPSAGSPAAA-----VGRESPGAAATSS 77 P P + AA+G L G G AP+ G+P AA GR PG Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQR 104 Query: 78 SGPQAQQHRGGGPQAQSHGEARLSDPP----GRAAP-PDVGEERRGGGGTELGPPAPPRP 132 GP + + R P + A+L PP G AP P G GP P P Sbjct: 105 PGPPSPR-RPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGP 163 Query: 133 -----RNGYQPHRPPGGGGG 147 R G P PG G G Sbjct: 164 AALAARAGPGPGPGPGPGPG 183 >gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo sapiens] Length = 309 Score = 49.3 bits (116), Expect = 1e-05 Identities = 42/137 (30%), Positives = 47/137 (34%), Gaps = 20/137 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PPP GG PP G G + G P G P P Sbjct: 183 PEGPPP----QGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-PPRPGKPEGP-----PSQG 232 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRA-APPDVGEERRGGGGTELGPPA---- 128 GP + GP Q + + PPGR PP G G L PPA Sbjct: 233 GNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPG----GNPQQPLPPPAGKPQ 288 Query: 129 -PPRPRNGYQPHRPPGG 144 PP P G +PHRPP G Sbjct: 289 GPPPPPQGGRPHRPPQG 305 Score = 46.2 bits (108), Expect = 1e-04 Identities = 38/134 (28%), Positives = 48/134 (35%), Gaps = 12/134 (8%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PPP GG PP G G + G P G P P Sbjct: 141 PEGPPP----QGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-PPHPGKPEGP-----PPQG 190 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDP-PGRA-APPDVGEERRGGGGTELGPPAPPR 131 S GP + + GP Q +++ P PG+ PP G + G G P P Sbjct: 191 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPP 250 Query: 132 PRNGYQPHRPPGGG 145 P+ G +P RPP G Sbjct: 251 PQEGNKPQRPPPPG 264 Score = 44.7 bits (104), Expect = 3e-04 Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 18/136 (13%) Query: 16 PPPPLKDE----SGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPG 71 PPPP K E GG PP G G + G P G P P Sbjct: 51 PPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-PPRPGKPEG-----QPP 104 Query: 72 AAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAP-- 129 S GP + + GP Q +++ PP R P+ G +GG ++ PP P Sbjct: 105 QGGNQSQGPPPRPGKPEGPPPQGGNQSQ--GPPPRPGKPE-GPPPQGGNQSQGPPPRPGK 161 Query: 130 ---PRPRNGYQPHRPP 142 P P+ G Q PP Sbjct: 162 PEGPPPQGGNQSQGPP 177 Score = 42.7 bits (99), Expect = 0.001 Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 19/147 (12%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTE-RGPGRCAPSAGSP 61 +++ E+ P ++ P + + G T PP + +GG + +GP P G P Sbjct: 22 DVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGP---PPRPGKP 78 Query: 62 AAAVGRESPGAAATSSSGPQAQQHRGGGPQAQS-HGEARLSDPPGRAAPPDVGEERRGGG 120 P S GP R G P+ Q G + PP R P+ G +GG Sbjct: 79 EGP-----PPQGGNQSQGPPP---RPGKPEGQPPQGGNQSQGPPPRPGKPE-GPPPQGGN 129 Query: 121 GTELGPPAP-----PRPRNGYQPHRPP 142 ++ PP P P P+ G Q PP Sbjct: 130 QSQGPPPRPGKPEGPPPQGGNQSQGPP 156 Score = 42.0 bits (97), Expect = 0.002 Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 12/131 (9%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PPP GG PP G+ G + G P G P P Sbjct: 78 PEGPPP----QGGNQSQGPPPRPGKPEGQPPQGGNQSQGP-PPRPGKPEGP-----PPQG 127 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDP-PGRA-APPDVGEERRGGGGTELGPPAPPR 131 S GP + + GP Q +++ P PG+ PP G + G G P P Sbjct: 128 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPP 187 Query: 132 PRNGYQPHRPP 142 P+ G Q PP Sbjct: 188 PQGGNQSQGPP 198 Score = 41.2 bits (95), Expect = 0.003 Identities = 41/149 (27%), Positives = 50/149 (33%), Gaps = 22/149 (14%) Query: 16 PPPPLKDES----GGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPG 71 PP P K E GG PP G G + G P G P P Sbjct: 93 PPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-PPRPGKPEGP-----PP 146 Query: 72 AAATSSSGPQAQQHRGGGPQAQSHGEARLSDP-PGRA-APPDVGEERRGGGGTELGPPAP 129 S GP + + GP Q +++ P PG+ PP G + G G P Sbjct: 147 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG 206 Query: 130 PRPRNGYQ----------PHRPPGGGGGK 148 P P+ G Q P PP GG K Sbjct: 207 PPPQGGNQSQGPPPRPGKPEGPPSQGGNK 235 Score = 40.4 bits (93), Expect = 0.006 Identities = 36/134 (26%), Positives = 48/134 (35%), Gaps = 18/134 (13%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PPP GG PP G G + G P G P P Sbjct: 120 PEGPPP----QGGNQSQGPPPRPGKPEGPPPQGGNQSQGP-PPRPGKPEGP-----PPQG 169 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRP- 132 S GP + GP Q +++ PP R P+ G +GG ++ PP P +P Sbjct: 170 GNQSQGPPPHPGKPEGPPPQGGNQSQ--GPPPRPGKPE-GPPPQGGNQSQGPPPRPGKPE 226 Query: 133 ----RNGYQPHRPP 142 + G +P PP Sbjct: 227 GPPSQGGNKPQGPP 240 >gi|32171233 BCDIN3 domain containing [Homo sapiens] Length = 292 Score = 48.9 bits (115), Expect = 2e-05 Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 70/226 (30%) Query: 415 YGNYCKYYGYRNPSCEDGRLRVLKPEWFRGRDV----------LDLGCNVGHLTLSIACK 464 +GN+ Y + P + RLR+L PE R LD+GCN G L++++ Sbjct: 31 FGNFPHYSRFHPP---EQRLRLLPPELLRQLFPESPENGPILGLDVGCNSGDLSVAL--- 84 Query: 465 WGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFP 524 +H+LS LP G + + R C Sbjct: 85 ----------------------YKHFLS----LPD-------GETCSDASREFRLLCCDI 111 Query: 525 ASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQT-------PEYDV 577 + R P FP+ + F+T +++ R V + +D+ Sbjct: 112 DPVLVKRAEKECP-----------FPDALTFITLDFMNQRTRKVLLSSFLSQFGRSVFDI 160 Query: 578 VLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY 623 C+S+T W+HLN GD GL + L++EPQPW Y Sbjct: 161 GFCMSITMWIHLNHGDHGLWEFLAHLSSLCH---YLLVEPQPWKCY 203 >gi|87196339 collagen, type VI, alpha 1 precursor [Homo sapiens] Length = 1028 Score = 48.9 bits (115), Expect = 2e-05 Identities = 50/148 (33%), Positives = 57/148 (38%), Gaps = 30/148 (20%) Query: 17 PPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAATS 76 PP K E+G G P + A GE G ERGP G+P R PG A Sbjct: 402 PPGEKGEAGDEGNPG----PDGAPGERGGPGERGP------RGTPGTRGPRGDPGEA--- 448 Query: 77 SSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGY 136 GPQ Q R G + PG A P +G +G G E GPP R Sbjct: 449 --GPQGDQGR--------EGPVGVPGDPGEAGP--IGP--KGYRGDE-GPPGSEGARGAP 493 Query: 137 QPHRPPGGGG--GKRRNSCNVGGGGGGF 162 P PPG G G+R G G GF Sbjct: 494 GPAGPPGDPGLMGERGEDGPAGNGTEGF 521 Score = 35.0 bits (79), Expect = 0.23 Identities = 40/147 (27%), Positives = 47/147 (31%), Gaps = 21/147 (14%) Query: 13 VPAPPPP--------LKDESG--GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 + PP P LK E G G G P SG+ E GP P A Sbjct: 354 IQGPPGPKGDPGAFGLKGEKGEPGADGEAGRPGSSGPSGDEGQPGEPGP----PGEKGEA 409 Query: 63 AAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPP-DVGEERRGGGG 121 G P A GP + RG G+ PG A P D G E G Sbjct: 410 GDEGNPGPDGAPGERGGPGERGPRGTPGTRGPRGD------PGEAGPQGDQGREGPVGVP 463 Query: 122 TELGPPAPPRPRNGYQPHRPPGGGGGK 148 + G P P+ PPG G + Sbjct: 464 GDPGEAGPIGPKGYRGDEGPPGSEGAR 490 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 48.5 bits (114), Expect = 2e-05 Identities = 91/365 (24%), Positives = 132/365 (36%), Gaps = 86/365 (23%) Query: 19 PLKDESGGGGGPTVPPHQEAASGELRGGT-ERGPGRCAPSA--GSPAAAVGRESPG---- 71 PL + +GG GG T+P A GT R P P++ G A SPG Sbjct: 57 PLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSS 116 Query: 72 ---AAATSSSGPQAQQ----------HRGGGPQAQ-----SHGEARLSDPPGRAAPPDVG 113 A+ T+ GP Q+ RG +A S G R + P P Sbjct: 117 PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176 Query: 114 EERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRRRV 173 R GTE+G PRP +P RPP G K +S + P+ RRR Sbjct: 177 ARRSRAAGTEVG---LPRPAPSARP-RPPTEGPRKSVSSAS----EHSTTEPSPAARRRP 228 Query: 174 NSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKGRDPVEILIPK 233 ++ P++ L + PL+ + T A S P P KG ++ L P Sbjct: 229 SAGGGLQRPASRSLSSSA-TPLSSPARSGPSARGTPRAPAHPSQPKP-KG---LQALRPP 283 Query: 234 DITDPLSLNTCTDEGHVVLASPLKTGRKRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPL 293 +T P + +SPL T AA S++ PPT P TP Sbjct: 284 QVTPP--RKDAAPALGPLSSSPLAT------------PSPSAALQSQA---PPTLPATP- 325 Query: 294 LHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPSALQGPSGSLSAPPAASVIS 353 ++++ C ++ +PLP A P SAPP+ + Sbjct: 326 ------------------------HSSSLTC--QLATPLPLAPPSP----SAPPSLQTLP 355 Query: 354 APPSS 358 +PP++ Sbjct: 356 SPPAT 360 Score = 36.6 bits (83), Expect = 0.080 Identities = 44/166 (26%), Positives = 57/166 (34%), Gaps = 35/166 (21%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASG---ELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 PPPP + S GP + H +A+ ELR G + GP A ++ P A + P A Sbjct: 612 PPPPSRSPSSTLSGPDLAGHSSSATSTPEELR-GYDSGPEGGAAASPPPDAELAACHPAA 670 Query: 73 AATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGG-------GGTELG 125 + + P A + G P PP G G G E Sbjct: 671 WSRGPAPPLAFRGAPGAPLPW---------------PPATGPGSADGLCTIYETEGPESA 715 Query: 126 PPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRR 171 PAP P PG GGK G G G + K+ R Sbjct: 716 TPAP----GALDPGPSPGTSGGKA-----AAGAGAGASSRSPKQAR 752 Score = 36.2 bits (82), Expect = 0.10 Identities = 36/136 (26%), Positives = 46/136 (33%), Gaps = 13/136 (9%) Query: 10 PFLVPAPPP--PLKDESGGGGGPTVPPHQEAASG-ELRGGTERGPGRCAPSAGSPAAAVG 66 P P PP P K S T P A GG +R R S+ +P ++ Sbjct: 194 PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 253 Query: 67 RESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGP 126 R P A T + Q + G QA + PP + A P +G P Sbjct: 254 RSGPSARGTPRAPAHPSQPKPKGLQALRPPQV---TPPRKDAAPALGP-------LSSSP 303 Query: 127 PAPPRPRNGYQPHRPP 142 A P P Q PP Sbjct: 304 LATPSPSAALQSQAPP 319 Score = 29.6 bits (65), Expect = 9.7 Identities = 44/155 (28%), Positives = 55/155 (35%), Gaps = 39/155 (25%) Query: 277 GGSESHPVPPTAPLT---PLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRD------- 326 GG+ + P PP A L P G + RG AP P+ T D Sbjct: 651 GGAAASP-PPDAELAACHPAAWSRGPAPPLAFRGAP-GAPLPWPPATGPGSADGLCTIYE 708 Query: 327 ----EVVSPLPSALQ-GPSGSLSAPPAASVISAPPSSSSRHRKR---------------- 365 E +P P AL GPS S AA+ A SS S + R Sbjct: 709 TEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQH 768 Query: 366 --RRT----SSKSEAGARGGGQGSKEKGRGSWGGR 394 RT +++ AG GGG G E G + G R Sbjct: 769 LLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGAR 803 >gi|38788260 bromodomain PHD finger transcription factor isoform 2 [Homo sapiens] Length = 2903 Score = 48.5 bits (114), Expect = 2e-05 Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 10/132 (7%) Query: 43 LRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSD 102 +RG R P + A A A P + G +HRG + +A ++ Sbjct: 1 MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVA- 59 Query: 103 PPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGF 162 P R + P R G PP PP P + P R GGGG R GGGGGG Sbjct: 60 PKTRLSSP-----RGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTG----GGGGGGH 110 Query: 163 KHPAFKRRRRVN 174 RR VN Sbjct: 111 LARTTAARRAVN 122 Score = 37.4 bits (85), Expect = 0.047 Identities = 39/128 (30%), Positives = 46/128 (35%), Gaps = 23/128 (17%) Query: 266 RGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCR 325 RG+ +Q A P PP P P G + RHRG +R + A R Sbjct: 5 RGRPPKQPAAPAAERCAPAPPPPPPPPT-SGPIGGLRSRHRGSSRGRWAAAQAEVAPKTR 63 Query: 326 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSRHRKRRRTSSKSEAGARGGGQGSKE 385 L S G S PP APPS+S+ R G RGGG G Sbjct: 64 ------LSSPRGGSSSRRKPPPPP---PAPPSTSAPGR-----------GGRGGGGG--R 101 Query: 386 KGRGSWGG 393 G G GG Sbjct: 102 TGGGGGGG 109 >gi|38788274 bromodomain PHD finger transcription factor isoform 1 [Homo sapiens] Length = 2920 Score = 48.5 bits (114), Expect = 2e-05 Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 10/132 (7%) Query: 43 LRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSD 102 +RG R P + A A A P + G +HRG + +A ++ Sbjct: 1 MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVA- 59 Query: 103 PPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGF 162 P R + P R G PP PP P + P R GGGG R GGGGGG Sbjct: 60 PKTRLSSP-----RGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTG----GGGGGGH 110 Query: 163 KHPAFKRRRRVN 174 RR VN Sbjct: 111 LARTTAARRAVN 122 Score = 37.4 bits (85), Expect = 0.047 Identities = 39/128 (30%), Positives = 46/128 (35%), Gaps = 23/128 (17%) Query: 266 RGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCR 325 RG+ +Q A P PP P P G + RHRG +R + A R Sbjct: 5 RGRPPKQPAAPAAERCAPAPPPPPPPPT-SGPIGGLRSRHRGSSRGRWAAAQAEVAPKTR 63 Query: 326 DEVVSPLPSALQGPSGSLSAPPAASVISAPPSSSSRHRKRRRTSSKSEAGARGGGQGSKE 385 L S G S PP APPS+S+ R G RGGG G Sbjct: 64 ------LSSPRGGSSSRRKPPPPP---PAPPSTSAPGR-----------GGRGGGGG--R 101 Query: 386 KGRGSWGG 393 G G GG Sbjct: 102 TGGGGGGG 109 >gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] Length = 2303 Score = 48.1 bits (113), Expect = 3e-05 Identities = 43/141 (30%), Positives = 59/141 (41%), Gaps = 32/141 (22%) Query: 12 LVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPG 71 LVPAP P +D+S P + +A+ L T +GP R P G PA GR+ P Sbjct: 1376 LVPAPAPAQEDDSCTDSAEGTPVNFSSAAS-LSDETLQGPPRDQP--GGPA---GRQRPT 1429 Query: 72 AAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELG------ 125 TS+ +H+ GG GR+A E+ RG G G Sbjct: 1430 GRPTSARQAMGHRHKAGG--------------AGRSA-----EQSRGAGKNRAGLELPLG 1470 Query: 126 -PPAPPRPRNGYQPHRPPGGG 145 PP+ P ++G +P R G G Sbjct: 1471 RPPSAPADKDGSKPGRTRGDG 1491 Score = 32.0 bits (71), Expect = 2.0 Identities = 35/130 (26%), Positives = 46/130 (35%), Gaps = 33/130 (25%) Query: 13 VPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGA 72 VP+P P + + G GP P + A P PAA SPG Sbjct: 1796 VPSPAP--RAQPKGTPGPRATPRKVAP----------------PCLAQPAAPAKVPSPGQ 1837 Query: 73 AATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRP 132 + S HR A++ A LS PP A PP + ++ P + P P Sbjct: 1838 QRSRSL------HR----PAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLP 1887 Query: 133 RNGYQPHRPP 142 R RPP Sbjct: 1888 RK-----RPP 1892 >gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo sapiens] Length = 247 Score = 48.1 bits (113), Expect = 3e-05 Identities = 44/151 (29%), Positives = 51/151 (33%), Gaps = 22/151 (14%) Query: 16 PPPPLKDES----GGGGGPTVPPHQ------EAASGELRGGTERGPG---RCAPSAGS-- 60 PPPP K E GG PPH G GT PG R P G+ Sbjct: 72 PPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQS 131 Query: 61 ----PAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLS-DPPGRAAPPDVGEE 115 P P S GP + GP Q ++R + PPG+ P E Sbjct: 132 HRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEG 191 Query: 116 RRGGGGTELGPPAPPRPRNG--YQPHRPPGG 144 + G G P P P G QP PP G Sbjct: 192 NKPQGPPPPGKPQGPPPAGGNPQQPQAPPAG 222 Score = 40.8 bits (94), Expect = 0.004 Identities = 41/140 (29%), Positives = 52/140 (37%), Gaps = 25/140 (17%) Query: 16 PPPPLKDE----SGGGGG--PTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRES 69 PPPP K E GG P PP + G +GP P G P +E Sbjct: 114 PPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGP---PPHPGKPEGPPPQE- 169 Query: 70 PGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRA-APPDVG----EERRGGGGTEL 124 G + S+ P + GP Q + + PPG+ PP G + + G Sbjct: 170 -GNKSRSARSPPGKPQ---GPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQ 225 Query: 125 GPPAPP------RPRNGYQP 138 GPP PP RP G QP Sbjct: 226 GPPPPPQGGRPPRPAQGQQP 245 Score = 40.0 bits (92), Expect = 0.007 Identities = 32/114 (28%), Positives = 40/114 (35%), Gaps = 6/114 (5%) Query: 40 SGELRGGTERG---PGRCAPSAGSPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHG 96 SG+ G +G P R P G P G G + P + G PQ + Sbjct: 33 SGKPEGRRPQGGNQPQRPPPPPGKPQ---GPPPQGGNQSQGPPPPPGKPEGRPPQGGNQS 89 Query: 97 EARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRR 150 + P PP G + G G P P P+ G Q HRPP G R Sbjct: 90 QGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPER 143 Score = 37.4 bits (85), Expect = 0.047 Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 17/146 (11%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 +++ E+ FL+ P + + GG P PP G+ +G +G + P Sbjct: 22 DVSQEESLFLISGKPEGRRPQ--GGNQPQRPP---PPPGKPQGPPPQGGNQSQGPPPPPG 76 Query: 63 AAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEAR-LSDPPGRAAPPDVGEERRGGGG 121 GR P S GP + P Q +++ PPG+ P +GG Sbjct: 77 KPEGR--PPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPP----QGGNQ 130 Query: 122 TELGPPAP-----PRPRNGYQPHRPP 142 + PP P P P+ G Q PP Sbjct: 131 SHRPPPPPGKPERPPPQGGNQSQGPP 156 Score = 35.0 bits (79), Expect = 0.23 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 277 GGSESH--PVPPTAPLTPLLHGEGASQQPRHRGQNRDAPQPYELNTAINCRDEVVSPLPS 334 GG++SH P PP P P G SQ P + P P E N + + R P Sbjct: 127 GGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGP 186 Query: 335 ALQGPSGSLSAPPAASVISAPPSSSSRHRKRRRTSSKSE 373 Q + PP PP+ + + + + K + Sbjct: 187 PQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQ 225 Score = 30.8 bits (68), Expect = 4.4 Identities = 30/102 (29%), Positives = 36/102 (35%), Gaps = 19/102 (18%) Query: 77 SSGPQAQQHRGGG-PQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPR---- 131 S P+ ++ +GG PQ R PPG+ P GG GPP PP Sbjct: 33 SGKPEGRRPQGGNQPQ-------RPPPPPGKPQGPPPQ-----GGNQSQGPPPPPGKPEG 80 Query: 132 --PRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFKRRR 171 P+ G Q PP G R G G P K R Sbjct: 81 RPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPER 122 >gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo sapiens] Length = 1818 Score = 47.8 bits (112), Expect = 3e-05 Identities = 48/166 (28%), Positives = 59/166 (35%), Gaps = 26/166 (15%) Query: 10 PFLVPAPPPPLKDESGGGG-GPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRE 68 P +P P P G G P Q+ + G+ GP G+P A G Sbjct: 1121 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDG 1180 Query: 69 SPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTEL 124 PG P+ QQ G Q G PPG + P GE+ G + Sbjct: 1181 EPG--------PRGQQGMFG--QKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPM 1230 Query: 125 GPPAPPRPR-----NGYQ-PHRPPG-----GGGGKRRNSCNVGGGG 159 GPP PP PR NG P PPG GG G++ G G Sbjct: 1231 GPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG 1276 Score = 43.9 bits (102), Expect = 5e-04 Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 22/133 (16%) Query: 26 GGGGPTVPPHQEAASGELRGGTERG----PGRCAPSAGSPAAAVGRESPGAAATSSSGPQ 81 GG GP PP + GE G PGR P G P A + +PG GPQ Sbjct: 1057 GGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ-GPPGPAGEKGAPG-----EKGPQ 1110 Query: 82 AQQHRGGGPQAQSHGEARLSDPPGRAAPP-------DVGEERRGGGGTELGPPAPPRPRN 134 R G G L P G A P ++GE + G + G PP P Sbjct: 1111 GPAGRDG-----VQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPG 1165 Query: 135 GYQPHRPPGGGGG 147 P PG GG Sbjct: 1166 LQGPVGAPGIAGG 1178 Score = 42.0 bits (97), Expect = 0.002 Identities = 52/186 (27%), Positives = 61/186 (32%), Gaps = 38/186 (20%) Query: 10 PFLVPAPPPPLKDES-GGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA-AAVGR 67 P P PP P + G GP PP + G + G E+G A + G P A VG Sbjct: 1229 PMGPPGPPGPRGPQGPNGADGPQGPP---GSVGSVGGVGEKGEPGEAGNPGPPGEAGVGG 1285 Query: 68 ES-----------PGAAAT-SSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPP----- 110 PGAA + GP G P G PPG P Sbjct: 1286 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV--GFPGDPGPPGEPGPAGQDGV 1343 Query: 111 --------DVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGF 162 D G+ G E GPP PP R PPG G + R G G Sbjct: 1344 GGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG------PPGAAGAEGRQGEKGAKGEAGA 1397 Query: 163 KHPAFK 168 + P K Sbjct: 1398 EGPPGK 1403 Score = 40.0 bits (92), Expect = 0.007 Identities = 45/174 (25%), Positives = 51/174 (29%), Gaps = 26/174 (14%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + LV PP P G G PP + +G +RGP G P Sbjct: 442 EPAVVEPGMLVEGPPGP-----AGPAGIMGPPGLQGPTGPPGDPGDRGP------PGRPG 490 Query: 63 AAVGRESPGAAAT-----------SSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RA 107 PG T S GP L PPG Sbjct: 491 LPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG 550 Query: 108 APPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGG 161 P VG G E G P P PR P P G G + R + G G G Sbjct: 551 RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPG 604 Score = 39.7 bits (91), Expect = 0.009 Identities = 48/168 (28%), Positives = 58/168 (34%), Gaps = 44/168 (26%) Query: 15 APPPPLKDESGGGGGPTV------PPHQEAASGELRGGTERG-------PGRCAPS--AG 59 A PP D G GP PP + +G+ G ++G PG PS AG Sbjct: 1307 AKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1366 Query: 60 SPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG-------------- 105 P R PGAA G + +Q G + GEA PPG Sbjct: 1367 PPGPPGKRGPPGAA-----GAEGRQGEKG-----AKGEAGAEGPPGKTGPVGPQGPAGKP 1416 Query: 106 -----RAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGK 148 R P VGE+ G + GPP P P PG G K Sbjct: 1417 GPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1464 Score = 39.3 bits (90), Expect = 0.012 Identities = 44/159 (27%), Positives = 54/159 (33%), Gaps = 12/159 (7%) Query: 13 VPAPPP-----PLKDESGGGGGPTVPPHQEAASGELRGG--TERGPGRCAPSAGSPAAAV 65 +P PP P + G GPT+ + A L+ RGP G P Sbjct: 497 LPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVG 556 Query: 66 GRESPGAAATSSS-GPQAQQHRGG--GPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGT 122 G S GA S GPQ + G GP + R GR P + G + G Sbjct: 557 GPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDG 616 Query: 123 ELGPPAPPRPRNGYQPHRPPG--GGGGKRRNSCNVGGGG 159 G P R P PPG G G R +G G Sbjct: 617 LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRG 655 Score = 38.9 bits (89), Expect = 0.016 Identities = 49/173 (28%), Positives = 56/173 (32%), Gaps = 32/173 (18%) Query: 26 GGGGPTVPPHQEAASGELRGGTERG-PGRCAP-----------SAGSPAAAVGRESPGAA 73 G GP PP + GE RG PG P + G P A PG Sbjct: 631 GPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPK 690 Query: 74 AT----SSSGPQAQQHRGG-----GPQAQ--------SHGEARLSDPPGRAAPPD-VGEE 115 GP QQ G GPQ G+ L+ PG PP G+E Sbjct: 691 GNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKE 750 Query: 116 RRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFK 168 + G LGPP P P P G G + G GF P FK Sbjct: 751 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF--PGFK 801 Score = 36.2 bits (82), Expect = 0.10 Identities = 40/131 (30%), Positives = 48/131 (36%), Gaps = 22/131 (16%) Query: 26 GGGGPTVPPHQEAASGELRG-----GTERGPGRCAP--SAGSPAAAVGRESPGAAATSSS 78 G GPT P +GE +G G PGR P S G P GA + Sbjct: 829 GRAGPTGDPGPSGQAGE-KGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGK 887 Query: 79 -GPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQ 137 GP+ Q+ GP G P G+ P +G G + GPP PP R Sbjct: 888 PGPRGQR----GPTGP-RGSRGARGPTGKPGP-------KGTSGGD-GPPGPPGERGPQG 934 Query: 138 PHRPPGGGGGK 148 P P G G K Sbjct: 935 PQGPVGFPGPK 945 Score = 36.2 bits (82), Expect = 0.10 Identities = 39/135 (28%), Positives = 48/135 (35%), Gaps = 20/135 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PP P+ G G PP ++ +G++ G PG P G + P A Sbjct: 1203 PGPPGPI-----GLQGLPGPPGEKGENGDV--GPMGPPG--------PPGPRGPQGPNGA 1247 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133 P + GG + GEA PPG A ER G E GPP P Sbjct: 1248 DGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGER--GEKGEAGPPGAAGPP 1305 Query: 134 NGYQPHRPPGGGGGK 148 PPG G K Sbjct: 1306 GA---KGPPGDDGPK 1317 Score = 34.3 bits (77), Expect = 0.40 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 11/99 (11%) Query: 18 PPLKDESGGGG--GPTVPPHQEAASGELRG--GTERGPGRCAPSAGSPAAAVGRESPGAA 73 P K E G G G PP ++ G+ RG GT+ PG G P A PG Sbjct: 1458 PGSKGEKGHPGLIGLIGPPGEQGEKGD-RGLPGTQGSPG-AKGDGGIPGPAGPLGPPGPP 1515 Query: 74 ATSSSGPQAQQHRGG--GPQAQSHGEARLSDPPGRAAPP 110 GPQ + G GP Q G++ L PPG PP Sbjct: 1516 GLP--GPQGPKGNKGSTGPAGQK-GDSGLPGPPGSPGPP 1551 Score = 32.7 bits (73), Expect = 1.2 Identities = 50/179 (27%), Positives = 59/179 (32%), Gaps = 41/179 (22%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAP-----SAGSPA-------- 62 P PP K G G ++ A GE G E PG+ P AG P Sbjct: 1368 PGPPGKRGPPGAAGAEGRQGEKGAKGE--AGAEGPPGKTGPVGPQGPAGKPGPEGLRGIP 1425 Query: 63 AAVGRES-PGAAATSSS----GPQAQQHRGGGPQAQSH----GEARLSDPPG-------R 106 VG + PGAA GP G P ++ G L PPG R Sbjct: 1426 GPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDR 1485 Query: 107 AAPPDVGEE-RRGGGGTE-----LGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGG 159 P G +G GG LGPP PP G + P G G + G G Sbjct: 1486 GLPGTQGSPGAKGDGGIPGPAGPLGPPGPP----GLPGPQGPKGNKGSTGPAGQKGDSG 1540 >gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo sapiens] Length = 1767 Score = 47.8 bits (112), Expect = 3e-05 Identities = 48/166 (28%), Positives = 59/166 (35%), Gaps = 26/166 (15%) Query: 10 PFLVPAPPPPLKDESGGGG-GPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRE 68 P +P P P G G P Q+ + G+ GP G+P A G Sbjct: 1070 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDG 1129 Query: 69 SPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTEL 124 PG P+ QQ G Q G PPG + P GE+ G + Sbjct: 1130 EPG--------PRGQQGMFG--QKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPM 1179 Query: 125 GPPAPPRPR-----NGYQ-PHRPPG-----GGGGKRRNSCNVGGGG 159 GPP PP PR NG P PPG GG G++ G G Sbjct: 1180 GPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG 1225 Score = 43.9 bits (102), Expect = 5e-04 Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 22/133 (16%) Query: 26 GGGGPTVPPHQEAASGELRGGTERG----PGRCAPSAGSPAAAVGRESPGAAATSSSGPQ 81 GG GP PP + GE G PGR P G P A + +PG GPQ Sbjct: 1006 GGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ-GPPGPAGEKGAPG-----EKGPQ 1059 Query: 82 AQQHRGGGPQAQSHGEARLSDPPGRAAPP-------DVGEERRGGGGTELGPPAPPRPRN 134 R G G L P G A P ++GE + G + G PP P Sbjct: 1060 GPAGRDG-----VQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPG 1114 Query: 135 GYQPHRPPGGGGG 147 P PG GG Sbjct: 1115 LQGPVGAPGIAGG 1127 Score = 42.0 bits (97), Expect = 0.002 Identities = 52/186 (27%), Positives = 61/186 (32%), Gaps = 38/186 (20%) Query: 10 PFLVPAPPPPLKDES-GGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA-AAVGR 67 P P PP P + G GP PP + G + G E+G A + G P A VG Sbjct: 1178 PMGPPGPPGPRGPQGPNGADGPQGPP---GSVGSVGGVGEKGEPGEAGNPGPPGEAGVGG 1234 Query: 68 ES-----------PGAAAT-SSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPP----- 110 PGAA + GP G P G PPG P Sbjct: 1235 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV--GFPGDPGPPGEPGPAGQDGV 1292 Query: 111 --------DVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGF 162 D G+ G E GPP PP R PPG G + R G G Sbjct: 1293 GGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG------PPGAAGAEGRQGEKGAKGEAGA 1346 Query: 163 KHPAFK 168 + P K Sbjct: 1347 EGPPGK 1352 Score = 40.0 bits (92), Expect = 0.007 Identities = 45/174 (25%), Positives = 51/174 (29%), Gaps = 26/174 (14%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + LV PP P G G PP + +G +RGP G P Sbjct: 391 EPAVVEPGMLVEGPPGP-----AGPAGIMGPPGLQGPTGPPGDPGDRGP------PGRPG 439 Query: 63 AAVGRESPGAAAT-----------SSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RA 107 PG T S GP L PPG Sbjct: 440 LPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG 499 Query: 108 APPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGG 161 P VG G E G P P PR P P G G + R + G G G Sbjct: 500 RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPG 553 Score = 39.7 bits (91), Expect = 0.009 Identities = 48/168 (28%), Positives = 58/168 (34%), Gaps = 44/168 (26%) Query: 15 APPPPLKDESGGGGGPTV------PPHQEAASGELRGGTERG-------PGRCAPS--AG 59 A PP D G GP PP + +G+ G ++G PG PS AG Sbjct: 1256 AKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1315 Query: 60 SPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG-------------- 105 P R PGAA G + +Q G + GEA PPG Sbjct: 1316 PPGPPGKRGPPGAA-----GAEGRQGEKG-----AKGEAGAEGPPGKTGPVGPQGPAGKP 1365 Query: 106 -----RAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGK 148 R P VGE+ G + GPP P P PG G K Sbjct: 1366 GPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1413 Score = 39.3 bits (90), Expect = 0.012 Identities = 44/159 (27%), Positives = 54/159 (33%), Gaps = 12/159 (7%) Query: 13 VPAPPP-----PLKDESGGGGGPTVPPHQEAASGELRGG--TERGPGRCAPSAGSPAAAV 65 +P PP P + G GPT+ + A L+ RGP G P Sbjct: 446 LPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVG 505 Query: 66 GRESPGAAATSSS-GPQAQQHRGG--GPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGT 122 G S GA S GPQ + G GP + R GR P + G + G Sbjct: 506 GPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDG 565 Query: 123 ELGPPAPPRPRNGYQPHRPPG--GGGGKRRNSCNVGGGG 159 G P R P PPG G G R +G G Sbjct: 566 LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRG 604 Score = 38.9 bits (89), Expect = 0.016 Identities = 49/173 (28%), Positives = 56/173 (32%), Gaps = 32/173 (18%) Query: 26 GGGGPTVPPHQEAASGELRGGTERG-PGRCAP-----------SAGSPAAAVGRESPGAA 73 G GP PP + GE RG PG P + G P A PG Sbjct: 580 GPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPK 639 Query: 74 AT----SSSGPQAQQHRGG-----GPQAQ--------SHGEARLSDPPGRAAPPD-VGEE 115 GP QQ G GPQ G+ L+ PG PP G+E Sbjct: 640 GNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKE 699 Query: 116 RRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFK 168 + G LGPP P P P G G + G GF P FK Sbjct: 700 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF--PGFK 750 Score = 36.2 bits (82), Expect = 0.10 Identities = 40/131 (30%), Positives = 48/131 (36%), Gaps = 22/131 (16%) Query: 26 GGGGPTVPPHQEAASGELRG-----GTERGPGRCAP--SAGSPAAAVGRESPGAAATSSS 78 G GPT P +GE +G G PGR P S G P GA + Sbjct: 778 GRAGPTGDPGPSGQAGE-KGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGK 836 Query: 79 -GPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQ 137 GP+ Q+ GP G P G+ P +G G + GPP PP R Sbjct: 837 PGPRGQR----GPTGP-RGSRGARGPTGKPGP-------KGTSGGD-GPPGPPGERGPQG 883 Query: 138 PHRPPGGGGGK 148 P P G G K Sbjct: 884 PQGPVGFPGPK 894 Score = 36.2 bits (82), Expect = 0.10 Identities = 39/135 (28%), Positives = 48/135 (35%), Gaps = 20/135 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PP P+ G G PP ++ +G++ G PG P G + P A Sbjct: 1152 PGPPGPI-----GLQGLPGPPGEKGENGDV--GPMGPPG--------PPGPRGPQGPNGA 1196 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133 P + GG + GEA PPG A ER G E GPP P Sbjct: 1197 DGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGER--GEKGEAGPPGAAGPP 1254 Query: 134 NGYQPHRPPGGGGGK 148 PPG G K Sbjct: 1255 GA---KGPPGDDGPK 1266 Score = 34.3 bits (77), Expect = 0.40 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 11/99 (11%) Query: 18 PPLKDESGGGG--GPTVPPHQEAASGELRG--GTERGPGRCAPSAGSPAAAVGRESPGAA 73 P K E G G G PP ++ G+ RG GT+ PG G P A PG Sbjct: 1407 PGSKGEKGHPGLIGLIGPPGEQGEKGD-RGLPGTQGSPG-AKGDGGIPGPAGPLGPPGPP 1464 Query: 74 ATSSSGPQAQQHRGG--GPQAQSHGEARLSDPPGRAAPP 110 GPQ + G GP Q G++ L PPG PP Sbjct: 1465 GLP--GPQGPKGNKGSTGPAGQK-GDSGLPGPPGSPGPP 1500 Score = 32.7 bits (73), Expect = 1.2 Identities = 50/179 (27%), Positives = 59/179 (32%), Gaps = 41/179 (22%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAP-----SAGSPA-------- 62 P PP K G G ++ A GE G E PG+ P AG P Sbjct: 1317 PGPPGKRGPPGAAGAEGRQGEKGAKGE--AGAEGPPGKTGPVGPQGPAGKPGPEGLRGIP 1374 Query: 63 AAVGRES-PGAAATSSS----GPQAQQHRGGGPQAQSH----GEARLSDPPG-------R 106 VG + PGAA GP G P ++ G L PPG R Sbjct: 1375 GPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDR 1434 Query: 107 AAPPDVGEE-RRGGGGTE-----LGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGG 159 P G +G GG LGPP PP G + P G G + G G Sbjct: 1435 GLPGTQGSPGAKGDGGIPGPAGPLGPPGPP----GLPGPQGPKGNKGSTGPAGQKGDSG 1489 >gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo sapiens] Length = 1806 Score = 47.8 bits (112), Expect = 3e-05 Identities = 48/166 (28%), Positives = 59/166 (35%), Gaps = 26/166 (15%) Query: 10 PFLVPAPPPPLKDESGGGG-GPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRE 68 P +P P P G G P Q+ + G+ GP G+P A G Sbjct: 1109 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDG 1168 Query: 69 SPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RAAPPDVGEERRGGGGTEL 124 PG P+ QQ G Q G PPG + P GE+ G + Sbjct: 1169 EPG--------PRGQQGMFG--QKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPM 1218 Query: 125 GPPAPPRPR-----NGYQ-PHRPPG-----GGGGKRRNSCNVGGGG 159 GPP PP PR NG P PPG GG G++ G G Sbjct: 1219 GPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPG 1264 Score = 43.9 bits (102), Expect = 5e-04 Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 22/133 (16%) Query: 26 GGGGPTVPPHQEAASGELRGGTERG----PGRCAPSAGSPAAAVGRESPGAAATSSSGPQ 81 GG GP PP + GE G PGR P G P A + +PG GPQ Sbjct: 1045 GGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ-GPPGPAGEKGAPG-----EKGPQ 1098 Query: 82 AQQHRGGGPQAQSHGEARLSDPPGRAAPP-------DVGEERRGGGGTELGPPAPPRPRN 134 R G G L P G A P ++GE + G + G PP P Sbjct: 1099 GPAGRDG-----VQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPG 1153 Query: 135 GYQPHRPPGGGGG 147 P PG GG Sbjct: 1154 LQGPVGAPGIAGG 1166 Score = 42.0 bits (97), Expect = 0.002 Identities = 52/186 (27%), Positives = 61/186 (32%), Gaps = 38/186 (20%) Query: 10 PFLVPAPPPPLKDES-GGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA-AAVGR 67 P P PP P + G GP PP + G + G E+G A + G P A VG Sbjct: 1217 PMGPPGPPGPRGPQGPNGADGPQGPP---GSVGSVGGVGEKGEPGEAGNPGPPGEAGVGG 1273 Query: 68 ES-----------PGAAAT-SSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPP----- 110 PGAA + GP G P G PPG P Sbjct: 1274 PKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPV--GFPGDPGPPGEPGPAGQDGV 1331 Query: 111 --------DVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGF 162 D G+ G E GPP PP R PPG G + R G G Sbjct: 1332 GGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG------PPGAAGAEGRQGEKGAKGEAGA 1385 Query: 163 KHPAFK 168 + P K Sbjct: 1386 EGPPGK 1391 Score = 40.0 bits (92), Expect = 0.007 Identities = 45/174 (25%), Positives = 51/174 (29%), Gaps = 26/174 (14%) Query: 3 EMAAEKEPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPA 62 E A + LV PP P G G PP + +G +RGP G P Sbjct: 430 EPAVVEPGMLVEGPPGP-----AGPAGIMGPPGLQGPTGPPGDPGDRGP------PGRPG 478 Query: 63 AAVGRESPGAAAT-----------SSSGPQAQQHRGGGPQAQSHGEARLSDPPG----RA 107 PG T S GP L PPG Sbjct: 479 LPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTG 538 Query: 108 APPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGG 161 P VG G E G P P PR P P G G + R + G G G Sbjct: 539 RPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPG 592 Score = 39.7 bits (91), Expect = 0.009 Identities = 48/168 (28%), Positives = 58/168 (34%), Gaps = 44/168 (26%) Query: 15 APPPPLKDESGGGGGPTV------PPHQEAASGELRGGTERG-------PGRCAPS--AG 59 A PP D G GP PP + +G+ G ++G PG PS AG Sbjct: 1295 AKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAG 1354 Query: 60 SPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPG-------------- 105 P R PGAA G + +Q G + GEA PPG Sbjct: 1355 PPGPPGKRGPPGAA-----GAEGRQGEKG-----AKGEAGAEGPPGKTGPVGPQGPAGKP 1404 Query: 106 -----RAAPPDVGEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGK 148 R P VGE+ G + GPP P P PG G K Sbjct: 1405 GPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1452 Score = 39.3 bits (90), Expect = 0.012 Identities = 44/159 (27%), Positives = 54/159 (33%), Gaps = 12/159 (7%) Query: 13 VPAPPP-----PLKDESGGGGGPTVPPHQEAASGELRGG--TERGPGRCAPSAGSPAAAV 65 +P PP P + G GPT+ + A L+ RGP G P Sbjct: 485 LPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVG 544 Query: 66 GRESPGAAATSSS-GPQAQQHRGG--GPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGT 122 G S GA S GPQ + G GP + R GR P + G + G Sbjct: 545 GPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDG 604 Query: 123 ELGPPAPPRPRNGYQPHRPPG--GGGGKRRNSCNVGGGG 159 G P R P PPG G G R +G G Sbjct: 605 LPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRG 643 Score = 38.9 bits (89), Expect = 0.016 Identities = 49/173 (28%), Positives = 56/173 (32%), Gaps = 32/173 (18%) Query: 26 GGGGPTVPPHQEAASGELRGGTERG-PGRCAP-----------SAGSPAAAVGRESPGAA 73 G GP PP + GE RG PG P + G P A PG Sbjct: 619 GPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPK 678 Query: 74 AT----SSSGPQAQQHRGG-----GPQAQ--------SHGEARLSDPPGRAAPPD-VGEE 115 GP QQ G GPQ G+ L+ PG PP G+E Sbjct: 679 GNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKE 738 Query: 116 RRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHPAFK 168 + G LGPP P P P G G + G GF P FK Sbjct: 739 GQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGF--PGFK 789 Score = 36.2 bits (82), Expect = 0.10 Identities = 40/131 (30%), Positives = 48/131 (36%), Gaps = 22/131 (16%) Query: 26 GGGGPTVPPHQEAASGELRG-----GTERGPGRCAP--SAGSPAAAVGRESPGAAATSSS 78 G GPT P +GE +G G PGR P S G P GA + Sbjct: 817 GRAGPTGDPGPSGQAGE-KGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGK 875 Query: 79 -GPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQ 137 GP+ Q+ GP G P G+ P +G G + GPP PP R Sbjct: 876 PGPRGQR----GPTGP-RGSRGARGPTGKPGP-------KGTSGGD-GPPGPPGERGPQG 922 Query: 138 PHRPPGGGGGK 148 P P G G K Sbjct: 923 PQGPVGFPGPK 933 Score = 36.2 bits (82), Expect = 0.10 Identities = 39/135 (28%), Positives = 48/135 (35%), Gaps = 20/135 (14%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 P PP P+ G G PP ++ +G++ G PG P G + P A Sbjct: 1191 PGPPGPI-----GLQGLPGPPGEKGENGDV--GPMGPPG--------PPGPRGPQGPNGA 1235 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133 P + GG + GEA PPG A ER G E GPP P Sbjct: 1236 DGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGER--GEKGEAGPPGAAGPP 1293 Query: 134 NGYQPHRPPGGGGGK 148 PPG G K Sbjct: 1294 GA---KGPPGDDGPK 1305 Score = 34.3 bits (77), Expect = 0.40 Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 11/99 (11%) Query: 18 PPLKDESGGGG--GPTVPPHQEAASGELRG--GTERGPGRCAPSAGSPAAAVGRESPGAA 73 P K E G G G PP ++ G+ RG GT+ PG G P A PG Sbjct: 1446 PGSKGEKGHPGLIGLIGPPGEQGEKGD-RGLPGTQGSPG-AKGDGGIPGPAGPLGPPGPP 1503 Query: 74 ATSSSGPQAQQHRGG--GPQAQSHGEARLSDPPGRAAPP 110 GPQ + G GP Q G++ L PPG PP Sbjct: 1504 GLP--GPQGPKGNKGSTGPAGQK-GDSGLPGPPGSPGPP 1539 Score = 32.7 bits (73), Expect = 1.2 Identities = 50/179 (27%), Positives = 59/179 (32%), Gaps = 41/179 (22%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAP-----SAGSPA-------- 62 P PP K G G ++ A GE G E PG+ P AG P Sbjct: 1356 PGPPGKRGPPGAAGAEGRQGEKGAKGE--AGAEGPPGKTGPVGPQGPAGKPGPEGLRGIP 1413 Query: 63 AAVGRES-PGAAATSSS----GPQAQQHRGGGPQAQSH----GEARLSDPPG-------R 106 VG + PGAA GP G P ++ G L PPG R Sbjct: 1414 GPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDR 1473 Query: 107 AAPPDVGEE-RRGGGGTE-----LGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGG 159 P G +G GG LGPP PP G + P G G + G G Sbjct: 1474 GLPGTQGSPGAKGDGGIPGPAGPLGPPGPP----GLPGPQGPKGNKGSTGPAGQKGDSG 1528 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 47.8 bits (112), Expect = 3e-05 Identities = 49/155 (31%), Positives = 57/155 (36%), Gaps = 11/155 (7%) Query: 11 FLVPAPPPPLKDESGGGG--GPTVPPHQEAASGEL-RGGTERGPG-RCAPSAGSPAAAVG 66 F PA P + E G G G P A+GE R G GPG R P GSP Sbjct: 490 FRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMP--GSPGGPGS 547 Query: 67 RESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGP 126 PG + + GP+ Q G P G P ER G GG GP Sbjct: 548 DGKPGPPGSQGESGRPGPPGPSGPRGQP-GVMGFPGPKGNDGAPGKNGERGGPGGP--GP 604 Query: 127 PAPPRPRNGYQPHRPPG--GGGGKRRNSCNVGGGG 159 PP P PPG G GG + ++ G G Sbjct: 605 QGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQG 639 Score = 44.7 bits (104), Expect = 3e-04 Identities = 49/175 (28%), Positives = 57/175 (32%), Gaps = 30/175 (17%) Query: 18 PPLKDESGGGGGPTVPPHQ------EAASGELRGGTERGPGRCAPSAGSPAA--AVGRES 69 PP + G GP PP + GE G GP G P A G++ Sbjct: 700 PPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDG 759 Query: 70 PGAAA-----TSSSGPQAQQHRGGGPQAQ-------SHGEARLSDPPGRAAPPDV----- 112 P +G + GG P S GE + PPG A P Sbjct: 760 PRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNG 819 Query: 113 ---GEERRGGGGT--ELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGF 162 G+ RG G E GPP P G P PPG G K G G GF Sbjct: 820 EPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGF 874 Score = 44.3 bits (103), Expect = 4e-04 Identities = 42/163 (25%), Positives = 54/163 (33%), Gaps = 23/163 (14%) Query: 18 PPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCA----------------PSAGSP 61 PP GG GP PP + GE G+ GPG P P Sbjct: 838 PPGVAGPPGGSGPAGPPGPQGVKGE--RGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGP 895 Query: 62 AAAVGRESPGAAATSSSGPQA---QQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRG 118 + + G++ P A ++ P + +G Q G PPG AP +G Sbjct: 896 SGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPG--APGPLGIAGIT 953 Query: 119 GGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGG 161 G GPP P PR P G G N + G G Sbjct: 954 GARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPG 996 Score = 42.0 bits (97), Expect = 0.002 Identities = 43/150 (28%), Positives = 53/150 (35%), Gaps = 12/150 (8%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAP--SAGSPAAAVGRESPG 71 P P P + G G P +P A + G++ PG P +AG P + + G Sbjct: 296 PGPMGP-RGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVG 354 Query: 72 AAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPR 131 A + S Q GPQ G A PPG PP G GG E+GP P Sbjct: 355 PAGSPGSNGAPGQRGEPGPQ----GHAGAQGPPG---PP--GINGSPGGKGEMGPAGIPG 405 Query: 132 PRNGYQPHRPPGGGGGKRRNSCNVGGGGGG 161 PPG G G G G Sbjct: 406 APGLMGARGPPGPAGANGAPGLRGGAGEPG 435 Score = 42.0 bits (97), Expect = 0.002 Identities = 36/129 (27%), Positives = 43/129 (33%), Gaps = 16/129 (12%) Query: 26 GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAA-------TSSS 78 GG GP PP + +G GPG G P + PG Sbjct: 600 GGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEP 659 Query: 79 GPQAQQHRGGGPQAQSH-GEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPRNGYQ 137 GP+ G P + G PPG A P + RGG GPP P + Sbjct: 660 GPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGL----RGGA----GPPGPEGGKGAAG 711 Query: 138 PHRPPGGGG 146 P PPG G Sbjct: 712 PPGPPGAAG 720 Score = 42.0 bits (97), Expect = 0.002 Identities = 46/162 (28%), Positives = 51/162 (31%), Gaps = 15/162 (9%) Query: 15 APPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPG--- 71 AP P G G PP A G G GP +AG P +PG Sbjct: 667 APGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQG 726 Query: 72 ----AAATSSSGPQAQQHRGGGPQAQS-------HGEARLSDPPGRAAPP-DVGEERRGG 119 S GP+ + GGP A G PPG A P D GE G Sbjct: 727 MPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPG 786 Query: 120 GGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGG 161 GP P R P P G G +N G G G Sbjct: 787 LPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERG 828 Score = 40.8 bits (94), Expect = 0.004 Identities = 37/129 (28%), Positives = 45/129 (34%), Gaps = 13/129 (10%) Query: 21 KDESGGGGGPTVPPHQEAAS--GELRGGTERGPGRCAPSAGSPAAAVGRESPGAAATSSS 78 + E+G G P P H G +RG A AG+P A R +PG Sbjct: 1034 RGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGP-----Q 1088 Query: 79 GPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDV-GEERRGGGGTELGPPAPPRPRNGYQ 137 GP RG + G A + G P G G +G P P PR Sbjct: 1089 GP-----RGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVG 1143 Query: 138 PHRPPGGGG 146 P PPG G Sbjct: 1144 PSGPPGKDG 1152 Score = 37.0 bits (84), Expect = 0.061 Identities = 42/142 (29%), Positives = 48/142 (33%), Gaps = 25/142 (17%) Query: 14 PAPPPPL----KDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAV---G 66 P PP P+ K G GP P +G +GP G AA Sbjct: 1049 PGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGH 1108 Query: 67 RESPG-AAATSSSGPQAQQHRGGGP-QAQSHGEARLSDPPGR---------AAPP----- 110 R PG A S GP QQ G P A G S PPG+ PP Sbjct: 1109 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN 1168 Query: 111 --DVGEERRGGGGTELGPPAPP 130 + G E G + GPP PP Sbjct: 1169 RGERGSEGSPGHPGQPGPPGPP 1190 Score = 33.5 bits (75), Expect = 0.67 Identities = 41/159 (25%), Positives = 52/159 (32%), Gaps = 30/159 (18%) Query: 9 EPFLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRE 68 +P P PP + G G P PP +G+ G PG S GSP Sbjct: 90 QPPTAPTRPPNGQGPQGPKGDPG-PPGIPGRNGD--PGIPGQPG----SPGSPGP----- 137 Query: 69 SPGAAATSSSGPQ-------AQQHRGGGPQAQSHGEARLSDPPGRAAPPDV--------- 112 PG + +GPQ + + G G + PPG PP Sbjct: 138 -PGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGS 196 Query: 113 -GEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRR 150 G + G + GP PP P P P G G R Sbjct: 197 PGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGR 235 Score = 32.7 bits (73), Expect = 1.2 Identities = 45/173 (26%), Positives = 54/173 (31%), Gaps = 34/173 (19%) Query: 16 PPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAAAT 75 P PP S G GP P A G +G GSP A +PG Sbjct: 890 PGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGI 949 Query: 76 S-------------------SSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDV---- 112 + S GPQ + G P A +G + PPG P + Sbjct: 950 AGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGA--NGLSGERGPPGPQGLPGLAGTA 1007 Query: 113 GEERRGGGGTELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHP 165 GE R G G P R+G PGG G + N G G P Sbjct: 1008 GEPGRDGNPGSDGLPG----RDG-----SPGGKGDRGENGSPGAPGAPGHPGP 1051 Score = 32.3 bits (72), Expect = 1.5 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 18 PPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCA-PSAGSPAAAVGRESPGAAATS 76 PP KD + G GP PP GE G+E PG P P A G G A + Sbjct: 1147 PPGKDGTSGHPGPIGPPGPRGNRGE--RGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAA 1204 Query: 77 SSGPQAQQHRGGGP 90 +G ++ G P Sbjct: 1205 IAGIGGEKAGGFAP 1218 >gi|33636756 MAP/microtubule affinity-regulating kinase 4 [Homo sapiens] Length = 688 Score = 47.8 bits (112), Expect = 3e-05 Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 23/171 (13%) Query: 254 SPLKTGR---KRHRHRGQHHQQQQAAGGSESHPVPPTAPLTPLLHGEGASQQPRHRGQNR 310 SP TG K R G+ + + GS S +PP++P+ H ++ P R + Sbjct: 438 SPTSTGEAELKEERLPGR--KASCSTAGSGSRGLPPSSPMVSSAHNPNKAEIPERRKDST 495 Query: 311 DAPQ--PYELNTAIN---CRD----EVVSPLPSALQGPSGSLSAPPAA-SVISAPPSSSS 360 P P + T N C + E S LP+ + SG+ PPA+ S S P S Sbjct: 496 STPNNLPPSMMTRRNTYVCTERPGAERPSLLPNGKENSSGTPRVPPASPSSHSLAPPSGE 555 Query: 361 RHRKRRRTSSKS--------EAGARGGGQGSKEKGRGSWGGRHHHHHPLPA 403 R R R ++ +S + A GGG G + G + H PLPA Sbjct: 556 RSRLARGSTIRSTFHGGQVRDRRAGGGGGGGVQNGPPASPTLAHEAAPLPA 606 Score = 33.9 bits (76), Expect = 0.52 Identities = 40/166 (24%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 22 DESGGGGGPTVPPHQEAASGELRGGTERGPGRCA--PSAGSPAAAVGRESPGAAATSSSG 79 D G P P ++GE ER PGR A +AGS + + SP ++ + Sbjct: 424 DFCGPSPAPLHPKRSPTSTGEAELKEERLPGRKASCSTAGSGSRGLPPSSPMVSSAHNPN 483 Query: 80 ----PQAQQHRGGGP------QAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAP 129 P+ ++ P ++ PG P + + GT PPA Sbjct: 484 KAEIPERRKDSTSTPNNLPPSMMTRRNTYVCTERPGAERPSLLPNGKENSSGTPRVPPAS 543 Query: 130 P-----RPRNGYQPHRPPGG------GGGKRRNSCNVGGGGGGFKH 164 P P +G + G GG+ R+ GGGGGG ++ Sbjct: 544 PSSHSLAPPSGERSRLARGSTIRSTFHGGQVRDRRAGGGGGGGVQN 589 >gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo sapiens] Length = 1691 Score = 47.4 bits (111), Expect = 5e-05 Identities = 51/173 (29%), Positives = 60/173 (34%), Gaps = 29/173 (16%) Query: 14 PAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPGRCAPSA--GSPAAAVGRESPG 71 P PP P K SG G P +P G G PG G P A + PG Sbjct: 1127 PGPPGP-KGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPG 1185 Query: 72 AAATSSSGP------QAQQHRGG-----------GPQAQS--HGEARLSDPPGRAAPPDV 112 + GP Q+ GG GP+ + HG + PPG P Sbjct: 1186 QPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGP 1245 Query: 113 GEERRGGGGTELGPPAPPRPRNGYQ----PHRPPG--GGGGKRRNSCNVGGGG 159 E G GPP P P G+Q P PPG G GG + N G G Sbjct: 1246 ALEGPKGNPGPQGPPGRPGP-TGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPG 1297 Score = 34.7 bits (78), Expect = 0.30 Identities = 38/152 (25%), Positives = 49/152 (32%), Gaps = 10/152 (6%) Query: 21 KDESGGGGGPTVP-------PHQEAASGELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 K E G G P +P P G E+G A + G P + PG Sbjct: 599 KGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQT 658 Query: 74 ATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTELGPPAPPRPR 133 T P + G G+ L PG+ P + + G +G P PP P+ Sbjct: 659 ITQPGKPGLPGNPGRDGDVGLPGDPGL---PGQPGLPGIPGSKGEPGIPGIGLPGPPGPK 715 Query: 134 NGYQPHRPPGGGGGKRRNSCNVGGGGGGFKHP 165 PPG G R G GF P Sbjct: 716 GFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGP 747 Score = 33.5 bits (75), Expect = 0.67 Identities = 46/170 (27%), Positives = 58/170 (34%), Gaps = 41/170 (24%) Query: 14 PAPP--PPLKDESG-----------GGGGPTVPPHQEAASGELRGGTERGPGRCAPSAGS 60 P PP P +K E G G G PP + G GP P Sbjct: 146 PGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPG-PPGLMG 204 Query: 61 PAAAVGRESP-GAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERR-- 117 P G P G + GP+ ++ GE L PPG P + E++R Sbjct: 205 PPGPPGLPGPKGNMGLNFQGPKGEK-----------GEQGLQGPPG--PPGQISEQKRPI 251 Query: 118 ------GGGGT--ELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGG 159 G G + GPP PP R P PPGG G++ G G Sbjct: 252 DVEFQKGDQGLPGDRGPPGPPGIRG---PPGPPGGEKGEKGEQGEPGKRG 298 Score = 32.7 bits (73), Expect = 1.2 Identities = 32/119 (26%), Positives = 43/119 (36%), Gaps = 11/119 (9%) Query: 21 KDESGGGG--GPTVPPHQEAASG-----ELRGGTERGPGRCAPSAGSPAAAVGRESPGAA 73 K E G G GP PP Q + E + G + PG P P G P Sbjct: 226 KGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPG--PPGIRGPPGPPGG 283 Query: 74 ATSSSGPQAQQHRGGGPQAQS-HGEARLSDPPGRAA-PPDVGEERRGGGGTELGPPAPP 130 G Q + + G P +G+ + PG P + G + G + GPP PP Sbjct: 284 EKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPP 342 Score = 30.8 bits (68), Expect = 4.4 Identities = 45/157 (28%), Positives = 51/157 (32%), Gaps = 36/157 (22%) Query: 17 PPPLKDESGGGGGPTVPPHQEAASGELRGGT-----ERG-------PGRCAPSAGSPAAA 64 PP L G G P +P H A + G ERG PG P G P Sbjct: 94 PPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPP-GPPGIP 152 Query: 65 VGRESPGAAATSS-SGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGGGGTE 123 + PG+ SS GP+ G P Q L P G P Sbjct: 153 GMKGEPGSIIMSSLPGPKGNPGYPGPPGIQG-----LPGPTGIPGP-------------- 193 Query: 124 LGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGGGGG 160 +GPP PP P PPG G K N G G Sbjct: 194 IGPPGPPGLMG---PPGPPGLPGPKGNMGLNFQGPKG 227 Score = 30.0 bits (66), Expect = 7.5 Identities = 37/131 (28%), Positives = 43/131 (32%), Gaps = 17/131 (12%) Query: 11 FLVPAPPPP-----LKDESGGGG-----GPTVPPHQEAASGELRGGTERGP-GRCAPSAG 59 F +P PP P K G G GP PP + G + GP G+ P Sbjct: 753 FALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGP 812 Query: 60 SPAAAVGRESPGAAATSSSGPQAQQHRGGGPQAQSHGEARLSDPPGRAAPPDVGEERRGG 119 +G + P GP Q G P GE PPG P GE G Sbjct: 813 PGLPGIGVQGP-PGPPGIPGPIGQPGLHGIP-----GEKGDPGPPGLDVPGPPGERGSPG 866 Query: 120 GGTELGPPAPP 130 GP PP Sbjct: 867 IPGAPGPIGPP 877 >gi|53832026 IQ motif and Sec7 domain 2 isoform 2 [Homo sapiens] Length = 949 Score = 47.4 bits (111), Expect = 5e-05 Identities = 44/156 (28%), Positives = 53/156 (33%), Gaps = 21/156 (13%) Query: 11 FLVPAPPPPLKDESGGGGGPTVPPHQEAASGELRGGTERGPG--RCAP----SAGSPAAA 64 F PAP PP+ P P G GT RGPG C +A P Sbjct: 340 FWAPAPLPPV---------PPPVPSGTREDGSREEGTRRGPGCLECRDFRLRAAHLPLLT 390 Query: 65 VGRESPGAAATSSSGPQAQQHRGGGPQAQS---HGEARLSDPPGRAAPPDVGEERRGGGG 121 + S + S + HR +A HG + PPGRA P G Sbjct: 391 IEPPSDSSVDLSDRSDRGSVHRQLVYEADGCSPHGTLKHKGPPGRAPIPHRHYPAPEGPA 450 Query: 122 TELGPPAPPRPRNGYQPHRPPGGGGGKRRNSCNVGG 157 P PP P +G P G GG+R C G Sbjct: 451 PAPPGPLPPAPNSGTGPS---GVAGGRRLGKCEAAG 483 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,207,985 Number of Sequences: 37866 Number of extensions: 2332684 Number of successful extensions: 19005 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 1386 Number of HSP's that attempted gapping in prelim test: 12651 Number of HSP's gapped (non-prelim): 6483 length of query: 689 length of database: 18,247,518 effective HSP length: 109 effective length of query: 580 effective length of database: 14,120,124 effective search space: 8189671920 effective search space used: 8189671920 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.