BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|46409258 hypothetical protein LOC57212 [Homo sapiens] (201 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|46409258 hypothetical protein LOC57212 [Homo sapiens] 412 e-115 gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 39 0.004 gi|110832843 TBP-associated factor 4 [Homo sapiens] 38 0.007 gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 37 0.009 gi|4503493 early growth response 1 [Homo sapiens] 37 0.011 gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 37 0.015 gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 36 0.025 gi|119943102 CREB binding protein isoform b [Homo sapiens] 36 0.025 gi|119943104 CREB binding protein isoform a [Homo sapiens] 36 0.025 gi|38788260 bromodomain PHD finger transcription factor isoform ... 35 0.033 gi|38788274 bromodomain PHD finger transcription factor isoform ... 35 0.033 gi|55953110 retinoblastoma protein-binding zinc finger protein i... 35 0.043 gi|20336260 retinoblastoma protein-binding zinc finger protein i... 35 0.043 gi|20336258 retinoblastoma protein-binding zinc finger protein i... 35 0.043 gi|116805344 proline rich, lacrimal 1 [Homo sapiens] 35 0.043 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.043 gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.043 gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.043 gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.043 gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.043 gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 35 0.056 gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 35 0.056 gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 35 0.056 gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 35 0.056 gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 35 0.056 gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 35 0.056 gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 35 0.056 gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 35 0.056 gi|16554449 zonadhesin isoform 3 [Homo sapiens] 35 0.056 gi|27881494 zonadhesin isoform 6 [Homo sapiens] 35 0.056 >gi|46409258 hypothetical protein LOC57212 [Homo sapiens] Length = 201 Score = 412 bits (1059), Expect = e-115 Identities = 201/201 (100%), Positives = 201/201 (100%) Query: 1 MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP 60 MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP Sbjct: 1 MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP 60 Query: 61 PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120 PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP Sbjct: 61 PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120 Query: 121 RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL 180 RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL Sbjct: 121 RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL 180 Query: 181 GQHQSGSGTGCRHCPQRPAAL 201 GQHQSGSGTGCRHCPQRPAAL Sbjct: 181 GQHQSGSGTGCRHCPQRPAAL 201 >gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] Length = 984 Score = 38.5 bits (88), Expect = 0.004 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Query: 35 ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSARED----ATPSASTGHLSVFPA 90 I S SPS + PA G + V+ ++STTTS +A P AS S PA Sbjct: 556 ITSASPSTDSASKPAFGF-GINSVSSSSVSTTTSTATAASQPFLFGAPQASAA--SFTPA 612 Query: 91 ----FQV-KIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDF 126 FQ K PA+P+ T +FS++ H +P + DF Sbjct: 613 MGSIFQFGKPPALPTTTTVTTFSQSLHTAVPTATSSSAADF 653 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 37.7 bits (86), Expect = 0.007 Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 17/118 (14%) Query: 25 PLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSAST-- 82 PLP+ P ++ P +G PPA S PPA + +A P+ +T Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPS-----PPAAPAPAAPAAAPPPPPPAPATLA 281 Query: 83 ---GHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLG 137 GH + P +P + Q S A GGP AGV+G G G Sbjct: 282 RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP-------AGVSGQPGPG 332 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 40 PSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVP 99 PS VPPPA G + LP A T LS TP+A+T + V P +P Sbjct: 384 PSPAAVPPPAPGTPTGLPKG--AAGAVTQSLS----RTPTATTSGIRATLTPTVLAPRLP 437 Query: 100 SEQTSQSFSEASHRVLPGG 118 Q Q+ + + LP G Sbjct: 438 --QPPQNPTNIQNFQLPPG 454 >gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] Length = 1682 Score = 37.4 bits (85), Expect = 0.009 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 14/110 (12%) Query: 14 ATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLS-A 72 A + TAHP P +L+ + P G PP A H L PP S + + Sbjct: 317 APAYTAHP--------PGHRLVPAAPPGPGPRPPGAESHGCLPATRPPGSDLRESRVQRS 368 Query: 73 REDA--TPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120 R D+ +P+A+T + P+ + P +P TS S S +S+ L G P Sbjct: 369 RMDSSVSPAATTACVPYAPS---RPPGLPGTTTSSSSSSSSNTGLRGVEP 415 Score = 28.1 bits (61), Expect = 5.2 Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 16/95 (16%) Query: 25 PLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGH 84 PLPR P SP+ PP V T LP PP+ + S R +P Sbjct: 583 PLPRPP--------SPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVS- 633 Query: 85 LSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGG 119 FP K P V S+A V PG G Sbjct: 634 ---FP----KTPEVGPGPPPGPLSKAPQPVPPGVG 661 >gi|4503493 early growth response 1 [Homo sapiens] Length = 543 Score = 37.0 bits (84), Expect = 0.011 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 7 SAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTT 66 S + A +SL+++P P P P + + PS T P+ TS + P ST Sbjct: 429 SVVASSATSSLSSYPS-PVATSYPSP--VTTSYPSPATTSYPSPVPTSF---SSPGSSTY 482 Query: 67 TSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111 S + + + PS +T + SV PAF ++ + PS + SFS ++ Sbjct: 483 PSPVHSGFPS-PSVATTYSSVPPAFPAQVSSFPSSAVTNSFSAST 526 >gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] Length = 337 Score = 36.6 bits (83), Expect = 0.015 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%) Query: 7 SAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTT 66 + A+ AT P PP P P P L+LSG+P + +PP A G PA+ Sbjct: 29 TGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGL-PLPPGAAG--------SPAVLRE 79 Query: 67 TSDLSAREDATPSASTGHLSVFPAFQ 92 + R A + G ++V A Q Sbjct: 80 AVEAVVRSFAKHTQGYGRVNVVEALQ 105 >gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] Length = 2639 Score = 35.8 bits (81), Expect = 0.025 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 18/126 (14%) Query: 5 SSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVG------HTSLLPV 58 S++ T++TA P P Q + +S + ++ P P G HTS P+ Sbjct: 1609 STTVTPITTTTTVTATPT--PTGTQTPTMIPISTTTTVTPTPTPTTGSTGPPTHTSTAPI 1666 Query: 59 ------NPPAISTTTSDLSAREDATP-SASTGHLSVF-PAFQVKIPAVPSEQTSQSFSEA 110 NPP S+T ++R ++P + ST LS PA ++ A PS T+ + + Sbjct: 1667 AELTTSNPPPESSTPQ--TSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSG 1724 Query: 111 SHRVLP 116 H + P Sbjct: 1725 GHTLSP 1730 Score = 28.5 bits (62), Expect = 4.0 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 20/93 (21%) Query: 25 PLPRQPQPQLI------LSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78 P P PQ L+ S ++ + PPA+ TS P + P TTTS Sbjct: 1674 PPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSG--------- 1724 Query: 79 SASTGH-LSVFPAFQVKIPAVPSEQTSQSFSEA 110 GH LS P+ P P+ T+ S A Sbjct: 1725 ----GHTLSPPPSTTTSPPGTPTRGTTTGSSSA 1753 >gi|119943102 CREB binding protein isoform b [Homo sapiens] Length = 2404 Score = 35.8 bits (81), Expect = 0.025 Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 22/125 (17%) Query: 9 ASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTS 68 AS L +T P HP P P +G PS+ PP G T P P ST S Sbjct: 802 ASQLPCPPVTQSPLHPT----PPPASTAAGMPSLQHTTPP--GMTPPQPAAPTQPSTPVS 855 Query: 69 DLSAREDATP----------------SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASH 112 TP +A+ ++ P V+ P+V + Q+SQ H Sbjct: 856 SSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVH 915 Query: 113 RVLPG 117 PG Sbjct: 916 AQPPG 920 >gi|119943104 CREB binding protein isoform a [Homo sapiens] Length = 2442 Score = 35.8 bits (81), Expect = 0.025 Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 22/125 (17%) Query: 9 ASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTS 68 AS L +T P HP P P +G PS+ PP G T P P ST S Sbjct: 840 ASQLPCPPVTQSPLHPT----PPPASTAAGMPSLQHTTPP--GMTPPQPAAPTQPSTPVS 893 Query: 69 DLSAREDATP----------------SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASH 112 TP +A+ ++ P V+ P+V + Q+SQ H Sbjct: 894 SSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVH 953 Query: 113 RVLPG 117 PG Sbjct: 954 AQPPG 958 >gi|38788260 bromodomain PHD finger transcription factor isoform 2 [Homo sapiens] Length = 2903 Score = 35.4 bits (80), Expect = 0.033 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 12/72 (16%) Query: 12 LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLL--PVNPPAISTTTSD 69 LA + A PC P P P P +P PPPAV HT LL P P A S Sbjct: 2643 LAQATAVAAPCPPVTPAPPAPP-----APPPSPPPPPAVQHTGLLSTPTLPAA-----SQ 2692 Query: 70 LSAREDATPSAS 81 RE+ S+S Sbjct: 2693 KRKREEEKDSSS 2704 >gi|38788274 bromodomain PHD finger transcription factor isoform 1 [Homo sapiens] Length = 2920 Score = 35.4 bits (80), Expect = 0.033 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 12/72 (16%) Query: 12 LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLL--PVNPPAISTTTSD 69 LA + A PC P P P P +P PPPAV HT LL P P A S Sbjct: 2660 LAQATAVAAPCPPVTPAPPAPP-----APPPSPPPPPAVQHTGLLSTPTLPAA-----SQ 2709 Query: 70 LSAREDATPSAS 81 RE+ S+S Sbjct: 2710 KRKREEEKDSSS 2721 >gi|55953110 retinoblastoma protein-binding zinc finger protein isoform c [Homo sapiens] Length = 1481 Score = 35.0 bits (79), Expect = 0.043 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Query: 14 ATSLTAHPCHPPLP----RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSD 69 ++S + HPC PL + P P L + SPS +PP ++ P PP +S+++S Sbjct: 798 SSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP-GPPTLSSSSSS 856 Query: 70 LSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111 S+ + S+S+ S P + A+ S +S EAS Sbjct: 857 SSSSSSFSSSSSSSSPSPPP-----LSAISSVVSSGDNLEAS 893 Score = 30.4 bits (67), Expect = 1.1 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 19 AHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78 A P P LP P P S SP P S LP+ P +S + S + E Sbjct: 782 ATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMS 841 Query: 79 SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120 +AS G ++ + S +S SFS +S P P Sbjct: 842 AASPGPPTLSSSSS-------SSSSSSSFSSSSSSSSPSPPP 876 >gi|20336260 retinoblastoma protein-binding zinc finger protein isoform b [Homo sapiens] Length = 1682 Score = 35.0 bits (79), Expect = 0.043 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Query: 14 ATSLTAHPCHPPLP----RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSD 69 ++S + HPC PL + P P L + SPS +PP ++ P PP +S+++S Sbjct: 999 SSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP-GPPTLSSSSSS 1057 Query: 70 LSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111 S+ + S+S+ S P + A+ S +S EAS Sbjct: 1058 SSSSSSFSSSSSSSSPSPPP-----LSAISSVVSSGDNLEAS 1094 Score = 30.4 bits (67), Expect = 1.1 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 19 AHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78 A P P LP P P S SP P S LP+ P +S + S + E Sbjct: 983 ATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMS 1042 Query: 79 SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120 +AS G ++ + S +S SFS +S P P Sbjct: 1043 AASPGPPTLSSSSS-------SSSSSSSFSSSSSSSSPSPPP 1077 >gi|20336258 retinoblastoma protein-binding zinc finger protein isoform a [Homo sapiens] Length = 1718 Score = 35.0 bits (79), Expect = 0.043 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Query: 14 ATSLTAHPCHPPLP----RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSD 69 ++S + HPC PL + P P L + SPS +PP ++ P PP +S+++S Sbjct: 999 SSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP-GPPTLSSSSSS 1057 Query: 70 LSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111 S+ + S+S+ S P + A+ S +S EAS Sbjct: 1058 SSSSSSFSSSSSSSSPSPPP-----LSAISSVVSSGDNLEAS 1094 Score = 30.4 bits (67), Expect = 1.1 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 19 AHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78 A P P LP P P S SP P S LP+ P +S + S + E Sbjct: 983 ATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMS 1042 Query: 79 SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120 +AS G ++ + S +S SFS +S P P Sbjct: 1043 AASPGPPTLSSSSS-------SSSSSSSFSSSSSSSSPSPPP 1077 >gi|116805344 proline rich, lacrimal 1 [Homo sapiens] Length = 248 Score = 35.0 bits (79), Expect = 0.043 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 26/108 (24%) Query: 21 PCHPPLP---------RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLS 71 P PP+P P+PQ+ ++ + + + NPP +T T+ S Sbjct: 122 PPFPPIPFFLAIYLPISNPEPQINITTA-------------DTTITTNPPTTATATTSTS 168 Query: 72 AREDATPSASTGHLSVFP----AFQVKIPAVPSEQTSQSFSEASHRVL 115 + T S+ST +S P + PA +E T+Q + H VL Sbjct: 169 TKPTMTISSSTVPISSTPEPATSISAATPAASTENTTQILANRPHTVL 216 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 35.0 bits (79), Expect = 0.043 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 18/124 (14%) Query: 10 SDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLL-PVN-------PP 61 S L S T+ P P L +P P + SP+ PPP G +SLL P+ PP Sbjct: 1088 SPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPA----PPP--GSSSLLKPLTVPPGYTFPP 1141 Query: 62 A----ISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPG 117 A STTT+ + P+ + L + P Q ++P+ Q S A V Sbjct: 1142 AAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANA 1201 Query: 118 GGPR 121 GG + Sbjct: 1202 GGSK 1205 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%) Query: 27 PRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLS 86 P+ P P LS +P+ VP PA T L PP T T L+ P++ G Sbjct: 1707 PQGPFPTQTLSLTPASSLVPTPA--QTLSLAPGPPLGPTQTLSLAPAPPLAPASPVG--- 1761 Query: 87 VFPAFQVKIPAVPSEQTSQSFSEASHRVL 115 PA + P+ ++ + AS + L Sbjct: 1762 --PAPAHTLTLAPASSSASLLAPASVQTL 1788 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Query: 25 PLPRQPQPQLILSGSPSIGTVPP--PAVGHTSLLPVNPPAI 63 P+P +P P LS P+ G VP PA S P PP I Sbjct: 1021 PVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLI 1061 >gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] Length = 1012 Score = 35.0 bits (79), Expect = 0.043 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Query: 12 LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSL-LPVNPPAISTTTSDL 70 L A L HP PP P PQ +P +GT P A HTSL LP + A+ S Sbjct: 303 LQAGPLLQHP-GPPQPFGLPPQASQGQAP-LGTSPAAAYPHTSLQLPASQSALQ---SQQ 357 Query: 71 SAREDATPSASTGHLSVFPAFQVKIPAVPSEQ 102 RE P A + P IP +P+ Q Sbjct: 358 PPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQ 389 >gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 35.0 bits (79), Expect = 0.043 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Query: 12 LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSL-LPVNPPAISTTTSDL 70 L A L HP PP P PQ +P +GT P A HTSL LP + A+ S Sbjct: 857 LQAGPLLQHP-GPPQPFGLPPQASQGQAP-LGTSPAAAYPHTSLQLPASQSALQ---SQQ 911 Query: 71 SAREDATPSASTGHLSVFPAFQVKIPAVPSEQ 102 RE P A + P IP +P+ Q Sbjct: 912 PPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQ 943 >gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 35.0 bits (79), Expect = 0.043 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Query: 12 LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSL-LPVNPPAISTTTSDL 70 L A L HP PP P PQ +P +GT P A HTSL LP + A+ S Sbjct: 857 LQAGPLLQHP-GPPQPFGLPPQASQGQAP-LGTSPAAAYPHTSLQLPASQSALQ---SQQ 911 Query: 71 SAREDATPSASTGHLSVFPAFQVKIPAVPSEQ 102 RE P A + P IP +P+ Q Sbjct: 912 PPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQ 943 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 35.0 bits (79), Expect = 0.043 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 24 PPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSAST- 82 PP P+ G+P+ V PP+ T LP P+ + S++E TP A+T Sbjct: 1317 PPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376 Query: 83 ---GHLSVFPAFQVKIPAVPS 100 G ++ P + PA+PS Sbjct: 1377 SHKGGPAMTPPSPKRGPAIPS 1397 Score = 33.5 bits (75), Expect = 0.12 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%) Query: 30 PQPQLILSGSPS-------IGTVPPPAVGHTSLLPVNPPAISTT-TSDLSAREDATPSAS 81 P LIL SP+ + +P +VG T L+ NP I+ T+ +P S Sbjct: 409 PTTSLILKSSPNATYHYPLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMS 468 Query: 82 TGHLS----VFPAFQVKIPAVPSEQTSQ 105 +G +S PA V P P E ++Q Sbjct: 469 SGPISNIEPTSPAALVMAPVAPKEPSTQ 496 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 38 GSPSIGTVPPPAVGHTSLLPVNPPA---ISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94 G P++ V PP+ P PPA ++T++S A P + +V P+ + Sbjct: 1463 GDPTLPAVTPPS-------PKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKE 1515 Query: 95 IPAVPSEQ 102 +PA PS + Sbjct: 1516 VPATPSSR 1523 Score = 30.0 bits (66), Expect = 1.4 Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 31/131 (23%) Query: 4 LSSSAASDLAATSLTAHPCHPPLPR-QPQPQLILSGSPSIGTVPP-------------PA 49 LS + D AT+ H PP P+ P P + SP T+PP P Sbjct: 841 LSFQGSKDSPATT---HSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPK 897 Query: 50 VGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSE 109 G + P PA+S T+S + ATP+ IPA PS + + + Sbjct: 898 EGPATPAPKQAPALSMTSSS-PKKARATPAPK------------GIPASPSPKGAPT-PP 943 Query: 110 ASHRVLPGGGP 120 A+ P GGP Sbjct: 944 AATPPSPKGGP 954 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%) Query: 24 PPLPRQPQP--QLILSGSPSIGTVPPPAVGHTSL---LPVNPPAISTTTSDLSAREDATP 78 PP P++P Q+ S SP P +G +L +P +P + T S S R+ P Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPS--SRRDPIAP 1529 Query: 79 SAS 81 +A+ Sbjct: 1530 TAT 1532 >gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] Length = 1263 Score = 34.7 bits (78), Expect = 0.056 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Query: 18 TAHPCHPPLP---RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPP 61 TA P PPLP R P P L GS I PPP G + P PP Sbjct: 664 TAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPP 710 >gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] Length = 1272 Score = 34.7 bits (78), Expect = 0.056 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Query: 18 TAHPCHPPLP---RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPP 61 TA P PPLP R P P L GS I PPP G + P PP Sbjct: 673 TAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPP 719 >gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo sapiens] Length = 834 Score = 34.7 bits (78), Expect = 0.056 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%) Query: 35 ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSARED----ATPSASTGHLSVFPA 90 I S SPS + PA G + V+ ++STTTS +A P AS S PA Sbjct: 405 ITSASPSTDSASKPAFGF-GINSVSSSSVSTTTSTATAASQPFLFGAPQASAA--SFTPA 461 Query: 91 ----FQV-KIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDF 126 FQ K PA+P+ T +FS++ +P + DF Sbjct: 462 MGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAADF 502 Score = 27.3 bits (59), Expect = 9.0 Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 14/130 (10%) Query: 35 ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94 + + +P+ + P +TS N P S+ S L + A P + G P K Sbjct: 509 LATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAK 568 Query: 95 IPAVPSEQTSQSFSEASH-------------RVLPGGGPR-CSRDFGAGVAGHLGLGIFG 140 PS +S +F ++ +++P P FG GL Sbjct: 569 PALTPSFGSSFTFGNSAAPAAAPTPAPPSMIKIVPAHVPTPIQPTFGGATHSAFGLKATA 628 Query: 141 VGFGSPALLQ 150 FG+PA Q Sbjct: 629 SAFGAPASSQ 638 >gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] Length = 1126 Score = 34.7 bits (78), Expect = 0.056 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%) Query: 38 GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85 G+P G PPPA H ++ ++ ++ D + PSA TG L Sbjct: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479 Query: 86 ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141 P F V + + + SH PGG P GAG+ + L Sbjct: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 536 Query: 142 GFGSPALLQSVV 153 G L+Q V+ Sbjct: 537 GLVGQLLMQPVL 548 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 12 LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63 L AT P PP P P P+ + GSPS G P +G SL P V + Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 703 Query: 64 STTTSDLSAREDATPS 79 S+ L AR ++ S Sbjct: 704 SSLLGSLGARAGSSES 719 Score = 28.5 bits (62), Expect = 4.0 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%) Query: 31 QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90 QP L+ G+P + P PA S N + A+ TP S L Sbjct: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 599 Query: 91 FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150 FS+ +L GP GAG +G I G PA LQ Sbjct: 600 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 638 Query: 151 SVVD 154 + D Sbjct: 639 GMTD 642 >gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] Length = 1126 Score = 34.7 bits (78), Expect = 0.056 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%) Query: 38 GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85 G+P G PPPA H ++ ++ ++ D + PSA TG L Sbjct: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479 Query: 86 ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141 P F V + + + SH PGG P GAG+ + L Sbjct: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 536 Query: 142 GFGSPALLQSVV 153 G L+Q V+ Sbjct: 537 GLVGQLLMQPVL 548 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 12 LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63 L AT P PP P P P+ + GSPS G P +G SL P V + Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 703 Query: 64 STTTSDLSAREDATPS 79 S+ L AR ++ S Sbjct: 704 SSLLGSLGARAGSSES 719 Score = 28.5 bits (62), Expect = 4.0 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%) Query: 31 QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90 QP L+ G+P + P PA S N + A+ TP S L Sbjct: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 599 Query: 91 FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150 FS+ +L GP GAG +G I G PA LQ Sbjct: 600 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 638 Query: 151 SVVD 154 + D Sbjct: 639 GMTD 642 >gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] Length = 1126 Score = 34.7 bits (78), Expect = 0.056 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%) Query: 38 GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85 G+P G PPPA H ++ ++ ++ D + PSA TG L Sbjct: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479 Query: 86 ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141 P F V + + + SH PGG P GAG+ + L Sbjct: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 536 Query: 142 GFGSPALLQSVV 153 G L+Q V+ Sbjct: 537 GLVGQLLMQPVL 548 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 12 LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63 L AT P PP P P P+ + GSPS G P +G SL P V + Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 703 Query: 64 STTTSDLSAREDATPS 79 S+ L AR ++ S Sbjct: 704 SSLLGSLGARAGSSES 719 Score = 28.5 bits (62), Expect = 4.0 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%) Query: 31 QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90 QP L+ G+P + P PA S N + A+ TP S L Sbjct: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 599 Query: 91 FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150 FS+ +L GP GAG +G I G PA LQ Sbjct: 600 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 638 Query: 151 SVVD 154 + D Sbjct: 639 GMTD 642 >gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] Length = 1132 Score = 34.7 bits (78), Expect = 0.056 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%) Query: 38 GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85 G+P G PPPA H ++ ++ ++ D + PSA TG L Sbjct: 426 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 485 Query: 86 ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141 P F V + + + SH PGG P GAG+ + L Sbjct: 486 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 542 Query: 142 GFGSPALLQSVV 153 G L+Q V+ Sbjct: 543 GLVGQLLMQPVL 554 Score = 29.3 bits (64), Expect = 2.4 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 12 LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63 L AT P PP P P P+ + GSPS G P +G SL P V + Sbjct: 650 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 709 Query: 64 STTTSDLSAREDATPS 79 S+ L AR ++ S Sbjct: 710 SSLLGSLGARAGSSES 725 Score = 28.5 bits (62), Expect = 4.0 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%) Query: 31 QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90 QP L+ G+P + P PA S N + A+ TP S L Sbjct: 551 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 605 Query: 91 FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150 FS+ +L GP GAG +G I G PA LQ Sbjct: 606 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 644 Query: 151 SVVD 154 + D Sbjct: 645 GMTD 648 >gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] Length = 987 Score = 34.7 bits (78), Expect = 0.056 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%) Query: 35 ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSARED----ATPSASTGHLSVFPA 90 I S SPS + PA G + V+ ++STTTS +A P AS S PA Sbjct: 556 ITSASPSTDSASKPAFGF-GINSVSSSSVSTTTSTATAASQPFLFGAPQASAA--SFTPA 612 Query: 91 ----FQV-KIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDF 126 FQ K PA+P+ T +FS++ +P + DF Sbjct: 613 MGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAADF 653 >gi|16554449 zonadhesin isoform 3 [Homo sapiens] Length = 2812 Score = 34.7 bits (78), Expect = 0.056 Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 56 LPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111 +P P I T +S E TP+ T + P+ ++ P +P+E+T+ S E + Sbjct: 782 IPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETT 837 Score = 34.3 bits (77), Expect = 0.073 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Query: 27 PRQPQPQ-LILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHL 85 P P + I S P+I T P +P P IST + E TP+ T Sbjct: 612 PNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTS 671 Query: 86 SVFPAFQVKIPAVPSEQTS 104 P + P++P+E+ S Sbjct: 672 MEEPVIPTEKPSIPTEKPS 690 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/63 (26%), Positives = 25/63 (39%) Query: 40 PSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVP 99 PS+ T P +P P IST + + + PS S P + P +P Sbjct: 577 PSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIP 636 Query: 100 SEQ 102 SE+ Sbjct: 637 SEK 639 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/75 (22%), Positives = 29/75 (38%) Query: 35 ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94 I + P+I + P +P P I T + + + PS + P + Sbjct: 600 ISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTE 659 Query: 95 IPAVPSEQTSQSFSE 109 P P+E+T+ S E Sbjct: 660 EPTTPTEETTTSMEE 674 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 24 PPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTG 83 P +P++ I + P+I T P +P P I + + + PS Sbjct: 584 PTVPKEKPT--IPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPT 641 Query: 84 HLSVFPAFQVKIPAVPSEQ----TSQSFSEASHRVLPGGGP 120 S P + P VP+E+ T ++ + V+P P Sbjct: 642 IPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKP 682 >gi|27881494 zonadhesin isoform 6 [Homo sapiens] Length = 2721 Score = 34.7 bits (78), Expect = 0.056 Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 56 LPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111 +P P I T +S E TP+ T + P+ ++ P +P+E+T+ S E + Sbjct: 782 IPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETT 837 Score = 34.3 bits (77), Expect = 0.073 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Query: 27 PRQPQPQ-LILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHL 85 P P + I S P+I T P +P P IST + E TP+ T Sbjct: 612 PNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTS 671 Query: 86 SVFPAFQVKIPAVPSEQTS 104 P + P++P+E+ S Sbjct: 672 MEEPVIPTEKPSIPTEKPS 690 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/63 (26%), Positives = 25/63 (39%) Query: 40 PSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVP 99 PS+ T P +P P IST + + + PS S P + P +P Sbjct: 577 PSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIP 636 Query: 100 SEQ 102 SE+ Sbjct: 637 SEK 639 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/75 (22%), Positives = 29/75 (38%) Query: 35 ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94 I + P+I + P +P P I T + + + PS + P + Sbjct: 600 ISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTE 659 Query: 95 IPAVPSEQTSQSFSE 109 P P+E+T+ S E Sbjct: 660 EPTTPTEETTTSMEE 674 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 24 PPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTG 83 P +P++ I + P+I T P +P P I + + + PS Sbjct: 584 PTVPKEKPT--IPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPT 641 Query: 84 HLSVFPAFQVKIPAVPSEQ----TSQSFSEASHRVLPGGGP 120 S P + P VP+E+ T ++ + V+P P Sbjct: 642 IPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKP 682 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.132 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,748,131 Number of Sequences: 37866 Number of extensions: 540850 Number of successful extensions: 3744 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 252 Number of HSP's that attempted gapping in prelim test: 3050 Number of HSP's gapped (non-prelim): 880 length of query: 201 length of database: 18,247,518 effective HSP length: 97 effective length of query: 104 effective length of database: 14,574,516 effective search space: 1515749664 effective search space used: 1515749664 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.