Guide to the Human Genome
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Search of human proteins with 46409258

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46409258 hypothetical protein LOC57212 [Homo sapiens]
         (201 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46409258 hypothetical protein LOC57212 [Homo sapiens]              412   e-115
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           39   0.004
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    38   0.007
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         37   0.009
gi|4503493 early growth response 1 [Homo sapiens]                      37   0.011
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]                   37   0.015
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]              36   0.025
gi|119943102 CREB binding protein isoform b [Homo sapiens]             36   0.025
gi|119943104 CREB binding protein isoform a [Homo sapiens]             36   0.025
gi|38788260 bromodomain PHD finger transcription factor isoform ...    35   0.033
gi|38788274 bromodomain PHD finger transcription factor isoform ...    35   0.033
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    35   0.043
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    35   0.043
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    35   0.043
gi|116805344 proline rich, lacrimal 1 [Homo sapiens]                   35   0.043
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         35   0.043
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          35   0.043
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          35   0.043
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          35   0.043
gi|163965366 nascent polypeptide-associated complex alpha subuni...    35   0.043
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     35   0.056
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     35   0.056
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ...    35   0.056
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]    35   0.056
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]     35   0.056
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]     35   0.056
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]    35   0.056
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]    35   0.056
gi|16554449 zonadhesin isoform 3 [Homo sapiens]                        35   0.056
gi|27881494 zonadhesin isoform 6 [Homo sapiens]                        35   0.056

>gi|46409258 hypothetical protein LOC57212 [Homo sapiens]
          Length = 201

 Score =  412 bits (1059), Expect = e-115
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP 60
           MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP
Sbjct: 1   MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP 60

Query: 61  PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120
           PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP
Sbjct: 61  PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120

Query: 121 RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL 180
           RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL
Sbjct: 121 RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL 180

Query: 181 GQHQSGSGTGCRHCPQRPAAL 201
           GQHQSGSGTGCRHCPQRPAAL
Sbjct: 181 GQHQSGSGTGCRHCPQRPAAL 201


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%)

Query: 35  ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSARED----ATPSASTGHLSVFPA 90
           I S SPS  +   PA G   +  V+  ++STTTS  +A         P AS    S  PA
Sbjct: 556 ITSASPSTDSASKPAFGF-GINSVSSSSVSTTTSTATAASQPFLFGAPQASAA--SFTPA 612

Query: 91  ----FQV-KIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDF 126
               FQ  K PA+P+  T  +FS++ H  +P      + DF
Sbjct: 613 MGSIFQFGKPPALPTTTTVTTFSQSLHTAVPTATSSSAADF 653


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 32/118 (27%), Positives = 44/118 (37%), Gaps = 17/118 (14%)

Query: 25  PLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSAST-- 82
           PLP+   P  ++   P +G   PPA    S     PPA     +  +A     P+ +T  
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPS-----PPAAPAPAAPAAAPPPPPPAPATLA 281

Query: 83  ---GHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLG 137
              GH +  P     +P   + Q   S   A       GGP       AGV+G  G G
Sbjct: 282 RPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP-------AGVSGQPGPG 332



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 40  PSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVP 99
           PS   VPPPA G  + LP    A    T  LS     TP+A+T  +       V  P +P
Sbjct: 384 PSPAAVPPPAPGTPTGLPKG--AAGAVTQSLS----RTPTATTSGIRATLTPTVLAPRLP 437

Query: 100 SEQTSQSFSEASHRVLPGG 118
             Q  Q+ +   +  LP G
Sbjct: 438 --QPPQNPTNIQNFQLPPG 454


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 14/110 (12%)

Query: 14  ATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLS-A 72
           A + TAHP        P  +L+ +  P  G  PP A  H  L    PP      S +  +
Sbjct: 317 APAYTAHP--------PGHRLVPAAPPGPGPRPPGAESHGCLPATRPPGSDLRESRVQRS 368

Query: 73  REDA--TPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120
           R D+  +P+A+T  +   P+   + P +P   TS S S +S+  L G  P
Sbjct: 369 RMDSSVSPAATTACVPYAPS---RPPGLPGTTTSSSSSSSSNTGLRGVEP 415



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 16/95 (16%)

Query: 25  PLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGH 84
           PLPR P        SP+     PP V  T  LP  PP+     +  S R   +P      
Sbjct: 583 PLPRPP--------SPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRPRVS- 633

Query: 85  LSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGG 119
              FP    K P V         S+A   V PG G
Sbjct: 634 ---FP----KTPEVGPGPPPGPLSKAPQPVPPGVG 661


>gi|4503493 early growth response 1 [Homo sapiens]
          Length = 543

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 7   SAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTT 66
           S  +  A +SL+++P  P     P P  + +  PS  T   P+   TS    + P  ST 
Sbjct: 429 SVVASSATSSLSSYPS-PVATSYPSP--VTTSYPSPATTSYPSPVPTSF---SSPGSSTY 482

Query: 67  TSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111
            S + +   + PS +T + SV PAF  ++ + PS   + SFS ++
Sbjct: 483 PSPVHSGFPS-PSVATTYSSVPPAFPAQVSSFPSSAVTNSFSAST 526


>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
          Length = 337

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 7   SAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTT 66
           + A+   AT     P  PP P  P P L+LSG+P +  +PP A G         PA+   
Sbjct: 29  TGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGL-PLPPGAAG--------SPAVLRE 79

Query: 67  TSDLSAREDATPSASTGHLSVFPAFQ 92
             +   R  A  +   G ++V  A Q
Sbjct: 80  AVEAVVRSFAKHTQGYGRVNVVEALQ 105


>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
          Length = 2639

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 18/126 (14%)

Query: 5    SSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVG------HTSLLPV 58
            S++       T++TA P   P   Q    + +S + ++   P P  G      HTS  P+
Sbjct: 1609 STTVTPITTTTTVTATPT--PTGTQTPTMIPISTTTTVTPTPTPTTGSTGPPTHTSTAPI 1666

Query: 59   ------NPPAISTTTSDLSAREDATP-SASTGHLSVF-PAFQVKIPAVPSEQTSQSFSEA 110
                  NPP  S+T    ++R  ++P + ST  LS   PA ++   A PS  T+ + +  
Sbjct: 1667 AELTTSNPPPESSTPQ--TSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSG 1724

Query: 111  SHRVLP 116
             H + P
Sbjct: 1725 GHTLSP 1730



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 20/93 (21%)

Query: 25   PLPRQPQPQLI------LSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78
            P P    PQ        L+ S ++ +  PPA+  TS  P + P   TTTS          
Sbjct: 1674 PPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSG--------- 1724

Query: 79   SASTGH-LSVFPAFQVKIPAVPSEQTSQSFSEA 110
                GH LS  P+     P  P+  T+   S A
Sbjct: 1725 ----GHTLSPPPSTTTSPPGTPTRGTTTGSSSA 1753


>gi|119943102 CREB binding protein isoform b [Homo sapiens]
          Length = 2404

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 22/125 (17%)

Query: 9   ASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTS 68
           AS L    +T  P HP     P P    +G PS+    PP  G T   P  P   ST  S
Sbjct: 802 ASQLPCPPVTQSPLHPT----PPPASTAAGMPSLQHTTPP--GMTPPQPAAPTQPSTPVS 855

Query: 69  DLSAREDATP----------------SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASH 112
                   TP                +A+   ++  P   V+ P+V + Q+SQ      H
Sbjct: 856 SSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVH 915

Query: 113 RVLPG 117
              PG
Sbjct: 916 AQPPG 920


>gi|119943104 CREB binding protein isoform a [Homo sapiens]
          Length = 2442

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 22/125 (17%)

Query: 9   ASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTS 68
           AS L    +T  P HP     P P    +G PS+    PP  G T   P  P   ST  S
Sbjct: 840 ASQLPCPPVTQSPLHPT----PPPASTAAGMPSLQHTTPP--GMTPPQPAAPTQPSTPVS 893

Query: 69  DLSAREDATP----------------SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASH 112
                   TP                +A+   ++  P   V+ P+V + Q+SQ      H
Sbjct: 894 SSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVH 953

Query: 113 RVLPG 117
              PG
Sbjct: 954 AQPPG 958


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 12/72 (16%)

Query: 12   LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLL--PVNPPAISTTTSD 69
            LA  +  A PC P  P  P P      +P     PPPAV HT LL  P  P A     S 
Sbjct: 2643 LAQATAVAAPCPPVTPAPPAPP-----APPPSPPPPPAVQHTGLLSTPTLPAA-----SQ 2692

Query: 70   LSAREDATPSAS 81
               RE+   S+S
Sbjct: 2693 KRKREEEKDSSS 2704


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 12/72 (16%)

Query: 12   LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLL--PVNPPAISTTTSD 69
            LA  +  A PC P  P  P P      +P     PPPAV HT LL  P  P A     S 
Sbjct: 2660 LAQATAVAAPCPPVTPAPPAPP-----APPPSPPPPPAVQHTGLLSTPTLPAA-----SQ 2709

Query: 70   LSAREDATPSAS 81
               RE+   S+S
Sbjct: 2710 KRKREEEKDSSS 2721


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 14  ATSLTAHPCHPPLP----RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSD 69
           ++S + HPC  PL     + P P L  + SPS   +PP     ++  P  PP +S+++S 
Sbjct: 798 SSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP-GPPTLSSSSSS 856

Query: 70  LSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111
            S+    + S+S+   S  P     + A+ S  +S    EAS
Sbjct: 857 SSSSSSFSSSSSSSSPSPPP-----LSAISSVVSSGDNLEAS 893



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 19  AHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78
           A P  P LP  P P    S SP     P       S LP+  P +S + S +   E    
Sbjct: 782 ATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMS 841

Query: 79  SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120
           +AS G  ++  +         S  +S SFS +S    P   P
Sbjct: 842 AASPGPPTLSSSSS-------SSSSSSSFSSSSSSSSPSPPP 876


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 14   ATSLTAHPCHPPLP----RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSD 69
            ++S + HPC  PL     + P P L  + SPS   +PP     ++  P  PP +S+++S 
Sbjct: 999  SSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP-GPPTLSSSSSS 1057

Query: 70   LSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111
             S+    + S+S+   S  P     + A+ S  +S    EAS
Sbjct: 1058 SSSSSSFSSSSSSSSPSPPP-----LSAISSVVSSGDNLEAS 1094



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 19   AHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78
            A P  P LP  P P    S SP     P       S LP+  P +S + S +   E    
Sbjct: 983  ATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMS 1042

Query: 79   SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120
            +AS G  ++  +         S  +S SFS +S    P   P
Sbjct: 1043 AASPGPPTLSSSSS-------SSSSSSSFSSSSSSSSPSPPP 1077


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 14   ATSLTAHPCHPPLP----RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSD 69
            ++S + HPC  PL     + P P L  + SPS   +PP     ++  P  PP +S+++S 
Sbjct: 999  SSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASP-GPPTLSSSSSS 1057

Query: 70   LSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111
             S+    + S+S+   S  P     + A+ S  +S    EAS
Sbjct: 1058 SSSSSSFSSSSSSSSPSPPP-----LSAISSVVSSGDNLEAS 1094



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 19   AHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATP 78
            A P  P LP  P P    S SP     P       S LP+  P +S + S +   E    
Sbjct: 983  ATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMS 1042

Query: 79   SASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 120
            +AS G  ++  +         S  +S SFS +S    P   P
Sbjct: 1043 AASPGPPTLSSSSS-------SSSSSSSFSSSSSSSSPSPPP 1077


>gi|116805344 proline rich, lacrimal 1 [Homo sapiens]
          Length = 248

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 26/108 (24%)

Query: 21  PCHPPLP---------RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLS 71
           P  PP+P           P+PQ+ ++ +              + +  NPP  +T T+  S
Sbjct: 122 PPFPPIPFFLAIYLPISNPEPQINITTA-------------DTTITTNPPTTATATTSTS 168

Query: 72  AREDATPSASTGHLSVFP----AFQVKIPAVPSEQTSQSFSEASHRVL 115
            +   T S+ST  +S  P    +     PA  +E T+Q  +   H VL
Sbjct: 169 TKPTMTISSSTVPISSTPEPATSISAATPAASTENTTQILANRPHTVL 216


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 10   SDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLL-PVN-------PP 61
            S L   S T+ P  P L  +P P   +  SP+    PPP  G +SLL P+        PP
Sbjct: 1088 SPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPA----PPP--GSSSLLKPLTVPPGYTFPP 1141

Query: 62   A----ISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPG 117
            A     STTT+  +      P+ +   L + P  Q ++P+       Q  S A   V   
Sbjct: 1142 AAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANA 1201

Query: 118  GGPR 121
            GG +
Sbjct: 1202 GGSK 1205



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 27   PRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLS 86
            P+ P P   LS +P+   VP PA   T  L   PP   T T  L+      P++  G   
Sbjct: 1707 PQGPFPTQTLSLTPASSLVPTPA--QTLSLAPGPPLGPTQTLSLAPAPPLAPASPVG--- 1761

Query: 87   VFPAFQVKIPAVPSEQTSQSFSEASHRVL 115
              PA    +   P+  ++   + AS + L
Sbjct: 1762 --PAPAHTLTLAPASSSASLLAPASVQTL 1788



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 25   PLPRQPQPQLILSGSPSIGTVPP--PAVGHTSLLPVNPPAI 63
            P+P +P P   LS  P+ G VP   PA    S  P  PP I
Sbjct: 1021 PVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLI 1061


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSL-LPVNPPAISTTTSDL 70
           L A  L  HP  PP P    PQ     +P +GT P  A  HTSL LP +  A+    S  
Sbjct: 303 LQAGPLLQHP-GPPQPFGLPPQASQGQAP-LGTSPAAAYPHTSLQLPASQSALQ---SQQ 357

Query: 71  SAREDATPSASTGHLSVFPAFQVKIPAVPSEQ 102
             RE   P A      + P     IP +P+ Q
Sbjct: 358 PPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQ 389


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSL-LPVNPPAISTTTSDL 70
           L A  L  HP  PP P    PQ     +P +GT P  A  HTSL LP +  A+    S  
Sbjct: 857 LQAGPLLQHP-GPPQPFGLPPQASQGQAP-LGTSPAAAYPHTSLQLPASQSALQ---SQQ 911

Query: 71  SAREDATPSASTGHLSVFPAFQVKIPAVPSEQ 102
             RE   P A      + P     IP +P+ Q
Sbjct: 912 PPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQ 943


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSL-LPVNPPAISTTTSDL 70
           L A  L  HP  PP P    PQ     +P +GT P  A  HTSL LP +  A+    S  
Sbjct: 857 LQAGPLLQHP-GPPQPFGLPPQASQGQAP-LGTSPAAAYPHTSLQLPASQSALQ---SQQ 911

Query: 71  SAREDATPSASTGHLSVFPAFQVKIPAVPSEQ 102
             RE   P A      + P     IP +P+ Q
Sbjct: 912 PPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQ 943


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 24   PPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSAST- 82
            PP P+         G+P+   V PP+   T  LP   P+     +  S++E  TP A+T 
Sbjct: 1317 PPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376

Query: 83   ---GHLSVFPAFQVKIPAVPS 100
               G  ++ P    + PA+PS
Sbjct: 1377 SHKGGPAMTPPSPKRGPAIPS 1397



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)

Query: 30  PQPQLILSGSPS-------IGTVPPPAVGHTSLLPVNPPAISTT-TSDLSAREDATPSAS 81
           P   LIL  SP+       +  +P  +VG T L+  NP  I+   T+        +P  S
Sbjct: 409 PTTSLILKSSPNATYHYPLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMS 468

Query: 82  TGHLS----VFPAFQVKIPAVPSEQTSQ 105
           +G +S      PA  V  P  P E ++Q
Sbjct: 469 SGPISNIEPTSPAALVMAPVAPKEPSTQ 496



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 10/68 (14%)

Query: 38   GSPSIGTVPPPAVGHTSLLPVNPPA---ISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94
            G P++  V PP+       P  PPA   ++T++S   A     P  +    +V P+   +
Sbjct: 1463 GDPTLPAVTPPS-------PKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKE 1515

Query: 95   IPAVPSEQ 102
            +PA PS +
Sbjct: 1516 VPATPSSR 1523



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 31/131 (23%)

Query: 4   LSSSAASDLAATSLTAHPCHPPLPR-QPQPQLILSGSPSIGTVPP-------------PA 49
           LS   + D  AT+   H   PP P+  P P  +   SP   T+PP             P 
Sbjct: 841 LSFQGSKDSPATT---HSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPK 897

Query: 50  VGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSE 109
            G  +  P   PA+S T+S    +  ATP+               IPA PS + + +   
Sbjct: 898 EGPATPAPKQAPALSMTSSS-PKKARATPAPK------------GIPASPSPKGAPT-PP 943

Query: 110 ASHRVLPGGGP 120
           A+    P GGP
Sbjct: 944 AATPPSPKGGP 954



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 24   PPLPRQPQP--QLILSGSPSIGTVPPPAVGHTSL---LPVNPPAISTTTSDLSAREDATP 78
            PP P++P    Q+  S SP      P  +G  +L   +P +P  +  T S  S R+   P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPS--SRRDPIAP 1529

Query: 79   SAS 81
            +A+
Sbjct: 1530 TAT 1532


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 18  TAHPCHPPLP---RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPP 61
           TA P  PPLP   R P P   L GS  I   PPP  G   + P  PP
Sbjct: 664 TAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPP 710


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 18  TAHPCHPPLP---RQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPP 61
           TA P  PPLP   R P P   L GS  I   PPP  G   + P  PP
Sbjct: 673 TAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPP 719


>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
           sapiens]
          Length = 834

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 35  ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSARED----ATPSASTGHLSVFPA 90
           I S SPS  +   PA G   +  V+  ++STTTS  +A         P AS    S  PA
Sbjct: 405 ITSASPSTDSASKPAFGF-GINSVSSSSVSTTTSTATAASQPFLFGAPQASAA--SFTPA 461

Query: 91  ----FQV-KIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDF 126
               FQ  K PA+P+  T  +FS++    +P      + DF
Sbjct: 462 MGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAADF 502



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 14/130 (10%)

Query: 35  ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94
           + + +P+  + P     +TS    N P  S+  S L +   A P  + G     P    K
Sbjct: 509 LATSAPATSSQPTLTFSNTSTPTFNIPFGSSAKSPLPSYPGANPQPAFGAAEGQPPGAAK 568

Query: 95  IPAVPSEQTSQSFSEASH-------------RVLPGGGPR-CSRDFGAGVAGHLGLGIFG 140
               PS  +S +F  ++              +++P   P      FG       GL    
Sbjct: 569 PALTPSFGSSFTFGNSAAPAAAPTPAPPSMIKIVPAHVPTPIQPTFGGATHSAFGLKATA 628

Query: 141 VGFGSPALLQ 150
             FG+PA  Q
Sbjct: 629 SAFGAPASSQ 638


>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%)

Query: 38  GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85
           G+P  G  PPPA  H  ++ ++  ++           D   +    PSA TG L      
Sbjct: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479

Query: 86  ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141
                  P F      V   + +   +  SH   PGG P      GAG+  +  L     
Sbjct: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 536

Query: 142 GFGSPALLQSVV 153
           G     L+Q V+
Sbjct: 537 GLVGQLLMQPVL 548



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63
           L AT     P  PP P  P P+   +   GSPS G   P  +G  SL P     V    +
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 703

Query: 64  STTTSDLSAREDATPS 79
           S+    L AR  ++ S
Sbjct: 704 SSLLGSLGARAGSSES 719



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%)

Query: 31  QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90
           QP L+  G+P +   P PA    S    N    +       A+   TP  S   L     
Sbjct: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 599

Query: 91  FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150
                           FS+    +L   GP      GAG +G     I     G PA LQ
Sbjct: 600 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 638

Query: 151 SVVD 154
            + D
Sbjct: 639 GMTD 642


>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%)

Query: 38  GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85
           G+P  G  PPPA  H  ++ ++  ++           D   +    PSA TG L      
Sbjct: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479

Query: 86  ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141
                  P F      V   + +   +  SH   PGG P      GAG+  +  L     
Sbjct: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 536

Query: 142 GFGSPALLQSVV 153
           G     L+Q V+
Sbjct: 537 GLVGQLLMQPVL 548



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63
           L AT     P  PP P  P P+   +   GSPS G   P  +G  SL P     V    +
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 703

Query: 64  STTTSDLSAREDATPS 79
           S+    L AR  ++ S
Sbjct: 704 SSLLGSLGARAGSSES 719



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%)

Query: 31  QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90
           QP L+  G+P +   P PA    S    N    +       A+   TP  S   L     
Sbjct: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 599

Query: 91  FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150
                           FS+    +L   GP      GAG +G     I     G PA LQ
Sbjct: 600 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 638

Query: 151 SVVD 154
            + D
Sbjct: 639 GMTD 642


>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%)

Query: 38  GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85
           G+P  G  PPPA  H  ++ ++  ++           D   +    PSA TG L      
Sbjct: 420 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 479

Query: 86  ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141
                  P F      V   + +   +  SH   PGG P      GAG+  +  L     
Sbjct: 480 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 536

Query: 142 GFGSPALLQSVV 153
           G     L+Q V+
Sbjct: 537 GLVGQLLMQPVL 548



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63
           L AT     P  PP P  P P+   +   GSPS G   P  +G  SL P     V    +
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 703

Query: 64  STTTSDLSAREDATPS 79
           S+    L AR  ++ S
Sbjct: 704 SSLLGSLGARAGSSES 719



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%)

Query: 31  QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90
           QP L+  G+P +   P PA    S    N    +       A+   TP  S   L     
Sbjct: 545 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 599

Query: 91  FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150
                           FS+    +L   GP      GAG +G     I     G PA LQ
Sbjct: 600 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 638

Query: 151 SVVD 154
            + D
Sbjct: 639 GMTD 642


>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
          Length = 1132

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 19/132 (14%)

Query: 38  GSPSIGTVPPPAVGHTSLLPVNPPAISTTT------SDLSAREDATPSASTGHL------ 85
           G+P  G  PPPA  H  ++ ++  ++           D   +    PSA TG L      
Sbjct: 426 GAPPPGPAPPPATSHPRVIRISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHG 485

Query: 86  ----SVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGV 141
                  P F      V   + +   +  SH   PGG P      GAG+  +  L     
Sbjct: 486 QTLGQQVPGFPTAPTRVVIARPTPPQARPSH---PGGPPVSGTLQGAGLGTNASLAQMVS 542

Query: 142 GFGSPALLQSVV 153
           G     L+Q V+
Sbjct: 543 GLVGQLLMQPVL 554



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 12  LAATSLTAHPCHPPLPRQPQPQ---LILSGSPSIGTVPPPAVGHTSLLP-----VNPPAI 63
           L AT     P  PP P  P P+   +   GSPS G   P  +G  SL P     V    +
Sbjct: 650 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQGVL 709

Query: 64  STTTSDLSAREDATPS 79
           S+    L AR  ++ S
Sbjct: 710 SSLLGSLGARAGSSES 725



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 26/124 (20%)

Query: 31  QPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPA 90
           QP L+  G+P +   P PA    S    N    +       A+   TP  S   L     
Sbjct: 551 QPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADL----- 605

Query: 91  FQVKIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDFGAGVAGHLGLGIFGVGFGSPALLQ 150
                           FS+    +L   GP      GAG +G     I     G PA LQ
Sbjct: 606 ---------------QFSQLLGNLLGPAGP------GAGGSGVASPTITVAMPGVPAFLQ 644

Query: 151 SVVD 154
            + D
Sbjct: 645 GMTD 648


>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
          Length = 987

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 35  ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSARED----ATPSASTGHLSVFPA 90
           I S SPS  +   PA G   +  V+  ++STTTS  +A         P AS    S  PA
Sbjct: 556 ITSASPSTDSASKPAFGF-GINSVSSSSVSTTTSTATAASQPFLFGAPQASAA--SFTPA 612

Query: 91  ----FQV-KIPAVPSEQTSQSFSEASHRVLPGGGPRCSRDF 126
               FQ  K PA+P+  T  +FS++    +P      + DF
Sbjct: 613 MGSIFQFGKPPALPTTTTVTTFSQSLPTAVPTATSSSAADF 653


>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
          Length = 2812

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 56  LPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111
           +P   P I T    +S  E  TP+  T   +  P+  ++ P +P+E+T+ S  E +
Sbjct: 782 IPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETT 837



 Score = 34.3 bits (77), Expect = 0.073
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 27  PRQPQPQ-LILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHL 85
           P  P  +  I S  P+I T  P        +P   P IST    +   E  TP+  T   
Sbjct: 612 PNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTS 671

Query: 86  SVFPAFQVKIPAVPSEQTS 104
              P    + P++P+E+ S
Sbjct: 672 MEEPVIPTEKPSIPTEKPS 690



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 40  PSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVP 99
           PS+ T  P        +P   P IST    + + +   PS      S  P    + P +P
Sbjct: 577 PSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIP 636

Query: 100 SEQ 102
           SE+
Sbjct: 637 SEK 639



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/75 (22%), Positives = 29/75 (38%)

Query: 35  ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94
           I +  P+I +  P        +P   P I T    + + +   PS      +  P    +
Sbjct: 600 ISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTE 659

Query: 95  IPAVPSEQTSQSFSE 109
            P  P+E+T+ S  E
Sbjct: 660 EPTTPTEETTTSMEE 674



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 24  PPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTG 83
           P +P++     I +  P+I T  P        +P   P I +    +   +   PS    
Sbjct: 584 PTVPKEKPT--IPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPT 641

Query: 84  HLSVFPAFQVKIPAVPSEQ----TSQSFSEASHRVLPGGGP 120
             S  P    + P VP+E+    T ++ +     V+P   P
Sbjct: 642 IPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKP 682


>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
          Length = 2721

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 56  LPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEAS 111
           +P   P I T    +S  E  TP+  T   +  P+  ++ P +P+E+T+ S  E +
Sbjct: 782 IPTEKPTIPTEKPTISTEEPTTPTEETTISTEKPSIPMEKPTLPTEETTTSVEETT 837



 Score = 34.3 bits (77), Expect = 0.073
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 27  PRQPQPQ-LILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHL 85
           P  P  +  I S  P+I T  P        +P   P IST    +   E  TP+  T   
Sbjct: 612 PNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTEEPTTPTEETTTS 671

Query: 86  SVFPAFQVKIPAVPSEQTS 104
              P    + P++P+E+ S
Sbjct: 672 MEEPVIPTEKPSIPTEKPS 690



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 40  PSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVP 99
           PS+ T  P        +P   P IST    + + +   PS      S  P    + P +P
Sbjct: 577 PSVTTEKPTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIP 636

Query: 100 SEQ 102
           SE+
Sbjct: 637 SEK 639



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/75 (22%), Positives = 29/75 (38%)

Query: 35  ILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTGHLSVFPAFQVK 94
           I +  P+I +  P        +P   P I T    + + +   PS      +  P    +
Sbjct: 600 ISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPTIPSEKPTISTEKPTVPTE 659

Query: 95  IPAVPSEQTSQSFSE 109
            P  P+E+T+ S  E
Sbjct: 660 EPTTPTEETTTSMEE 674



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 24  PPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNPPAISTTTSDLSAREDATPSASTG 83
           P +P++     I +  P+I T  P        +P   P I +    +   +   PS    
Sbjct: 584 PTVPKEKPT--IPTEKPTISTEKPTIPSEKPNMPSEKPTIPSEKPTILTEKPTIPSEKPT 641

Query: 84  HLSVFPAFQVKIPAVPSEQ----TSQSFSEASHRVLPGGGP 120
             S  P    + P VP+E+    T ++ +     V+P   P
Sbjct: 642 IPSEKPTISTEKPTVPTEEPTTPTEETTTSMEEPVIPTEKP 682


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,748,131
Number of Sequences: 37866
Number of extensions: 540850
Number of successful extensions: 3744
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 3050
Number of HSP's gapped (non-prelim): 880
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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