BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens] (219 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens] 462 e-130 gi|46370064 endothelin 3 isoform 1 preproprotein [Homo sapiens] 419 e-118 gi|4557545 endothelin 3 isoform 1 preproprotein [Homo sapiens] 419 e-118 gi|46370062 endothelin 3 isoform 3 preproprotein [Homo sapiens] 389 e-108 gi|4503463 endothelin 2 preproprotein [Homo sapiens] 89 4e-18 gi|154800437 endothelin 1 [Homo sapiens] 89 4e-18 gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 41 0.001 gi|57232759 intestine-specific homeobox [Homo sapiens] 37 0.017 gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 37 0.017 gi|33286446 opioid growth factor receptor [Homo sapiens] 36 0.029 gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap... 36 0.029 gi|153792780 additional sex combs like 2 [Homo sapiens] 35 0.038 gi|169169677 PREDICTED: hypothetical protein [Homo sapiens] 35 0.050 gi|122937321 UNC homeobox [Homo sapiens] 35 0.065 gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 34 0.085 gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 34 0.085 gi|23397672 homeobox D4 [Homo sapiens] 33 0.19 gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19 gi|6912446 potassium voltage-gated channel, subfamily H, member ... 33 0.25 gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 33 0.25 gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 33 0.25 gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 33 0.25 gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 33 0.25 gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 33 0.25 gi|150378478 PR domain containing 8 [Homo sapiens] 33 0.25 gi|150378439 PR domain containing 8 [Homo sapiens] 33 0.25 gi|239743739 PREDICTED: hypothetical protein XP_002342949 [Homo ... 32 0.32 gi|5031943 nescient helix loop helix 1 [Homo sapiens] 32 0.32 gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 32 0.32 gi|18201900 T-box 6 [Homo sapiens] 32 0.42 >gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens] Length = 219 Score = 462 bits (1188), Expect = e-130 Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG Sbjct: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 Query: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT Sbjct: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 Query: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS Sbjct: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 Query: 181 SNSRTAEKTDKEEEGKVRGANRGLCQRRLKSRTNKASRL 219 SNSRTAEKTDKEEEGKVRGANRGLCQRRLKSRTNKASRL Sbjct: 181 SNSRTAEKTDKEEEGKVRGANRGLCQRRLKSRTNKASRL 219 >gi|46370064 endothelin 3 isoform 1 preproprotein [Homo sapiens] Length = 238 Score = 419 bits (1077), Expect = e-118 Identities = 197/197 (100%), Positives = 197/197 (100%) Query: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG Sbjct: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 Query: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT Sbjct: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 Query: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS Sbjct: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 Query: 181 SNSRTAEKTDKEEEGKV 197 SNSRTAEKTDKEEEGKV Sbjct: 181 SNSRTAEKTDKEEEGKV 197 >gi|4557545 endothelin 3 isoform 1 preproprotein [Homo sapiens] Length = 238 Score = 419 bits (1077), Expect = e-118 Identities = 197/197 (100%), Positives = 197/197 (100%) Query: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG Sbjct: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 Query: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT Sbjct: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 Query: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS Sbjct: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 Query: 181 SNSRTAEKTDKEEEGKV 197 SNSRTAEKTDKEEEGKV Sbjct: 181 SNSRTAEKTDKEEEGKV 197 >gi|46370062 endothelin 3 isoform 3 preproprotein [Homo sapiens] Length = 224 Score = 389 bits (998), Expect = e-108 Identities = 181/192 (94%), Positives = 184/192 (95%) Query: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG Sbjct: 1 MEPGLWLLFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAG 60 Query: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT Sbjct: 61 PGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINT 120 Query: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS Sbjct: 121 PEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVS 180 Query: 181 SNSRTAEKTDKE 192 ++ K+ Sbjct: 181 RQVEVKDQQSKQ 192 >gi|4503463 endothelin 2 preproprotein [Homo sapiens] Length = 178 Score = 88.6 bits (218), Expect = 4e-18 Identities = 58/151 (38%), Positives = 74/151 (49%), Gaps = 26/151 (17%) Query: 62 GEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYCHLDIIWINTP 121 G+G A T Q P A+G H R RRC+C ++ DKECVY+CHLDIIW+NTP Sbjct: 22 GKGQAAATLEQ------PASSSHAQGT--HLRLRRCSCSSWLDKECVYFCHLDIIWVNTP 73 Query: 122 EQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLHFCTQTLDVSS 181 EQT PYGL N +R LP RC C D AC FC + + Sbjct: 74 EQTAPYGLGN-----PPRRRRRSLP----------RRCQCSSARDPACATFCLRRPWTEA 118 Query: 182 NSRTAEKT--DKEEEGKVRGANRGLCQRRLK 210 + + K+ D + GK GA G +RL+ Sbjct: 119 GAVPSRKSPADVFQTGKT-GATTGELLQRLR 148 >gi|154800437 endothelin 1 [Homo sapiens] Length = 212 Score = 88.6 bits (218), Expect = 4e-18 Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 15/145 (10%) Query: 52 GPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDKECVYYC 111 G E V G V + P+P P + + RS+RC+C + DKECVY+C Sbjct: 17 GAPETAVLGAELSAVGENGGEKPTPSPPWRLR---------RSKRCSCSSLMDKECVYFC 67 Query: 112 HLDIIWINTPEQTVPYGLSNYRGSFRGKRSAGPLPGNLQLSHRPHLRCACVGRYDKACLH 171 HLDIIW+NTPE VPYGL GS R KR+ L RC C + DK C + Sbjct: 68 HLDIIWVNTPEHVVPYGL----GSPRSKRALENLLPTKATDREN--RCQCASQKDKKCWN 121 Query: 172 FCTQTLDVSSNSRTAEKTDKEEEGK 196 FC ++ + + + ++GK Sbjct: 122 FCQAGKELRAEDIMEKDWNNHKKGK 146 >gi|71274172 ankyrin repeat domain 56 [Homo sapiens] Length = 793 Score = 40.8 bits (94), Expect = 0.001 Identities = 33/111 (29%), Positives = 40/111 (36%), Gaps = 22/111 (19%) Query: 15 SAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAG-------------PGEETVAGP 61 SA G PCS G Q P R E + EE AG PG ++ P Sbjct: 98 SAGGAAPCSPRGARRGEPPQQQPRRRRREKEPEEEPAGAAARAADAACNGLPGSDSRRAP 157 Query: 62 GEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKDK-ECVYYC 111 G+G G S GSPGQ A R +C K + C + C Sbjct: 158 GKG--------GGSKGSPGQRPPVPAAAAAGAQARASCAAAKTQGRCCWEC 200 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/37 (37%), Positives = 18/37 (48%) Query: 47 EETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQ 83 EE + P E A P G AP + +G G P Q+Q Sbjct: 83 EEGLQRPREPPAAAPSAGGAAPCSPRGARRGEPPQQQ 119 >gi|57232759 intestine-specific homeobox [Homo sapiens] Length = 245 Score = 36.6 bits (83), Expect = 0.017 Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 25/126 (19%) Query: 39 AARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRRCT 98 A RS+ D E GPGEE GPGE + + L+ P ++Q EG R R T Sbjct: 41 ARRSDMDRPE---GPGEE---GPGEAAASGSGLE-----KPPKDQPQEGRKSKRRVR--T 87 Query: 99 CFTYKD----KECVYYCHLDIIWI--------NTPEQTVPYGLSNYRGSFRGKRSAGPLP 146 FT + ++ ++ H + I N PE V N R +R + G L Sbjct: 88 TFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQEKIGNLG 147 Query: 147 GNLQLS 152 QLS Sbjct: 148 APQQLS 153 >gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] Length = 1336 Score = 36.6 bits (83), Expect = 0.017 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Query: 18 GFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPT---ALQGP 74 G P G RG+ P G +E PG ++ GP +G++ P +QGP Sbjct: 821 GHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGP 880 Query: 75 SPGSPGQEQAAEG 87 PG GQ+ A G Sbjct: 881 -PGPQGQQNPARG 892 >gi|33286446 opioid growth factor receptor [Homo sapiens] Length = 677 Score = 35.8 bits (81), Expect = 0.029 Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 28 AGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTV-APTALQGPSPGSPGQEQAAE 86 AG S P A SE EE G GP EGT +P+ GPSP P ++ AE Sbjct: 482 AGSPAPSGHPKAGHSENGVEEDTEGR-----TGPKEGTPGSPSETPGPSPAGPAGDEPAE 536 Query: 87 GAPE 90 E Sbjct: 537 SPSE 540 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 21 PCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEET---VAGPG--EGTVAPTALQGPS 75 P +GD S+ P + +E P E AGP E +P+ GPS Sbjct: 526 PAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPS 585 Query: 76 PGSPGQEQAAEGAPE 90 P P +++ AE E Sbjct: 586 PAGPTRDEPAESPSE 600 >gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sapiens] Length = 501 Score = 35.8 bits (81), Expect = 0.029 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 25 SGDAGRRG--VSQAPTAARSEG--DCEETVAGPGEETVAGPGEGTVAP--TALQGPSPGS 78 SG A RG + AP + G E T+AG G+E A P G+ P T Q P Sbjct: 170 SGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEE 229 Query: 79 PGQEQAAE 86 PG+ +AA+ Sbjct: 230 PGELEAAQ 237 >gi|153792780 additional sex combs like 2 [Homo sapiens] Length = 1435 Score = 35.4 bits (80), Expect = 0.038 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 30 RRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAAEG 87 +R + A AA + T+ GPG GPGEG TA +G SPGS + +G Sbjct: 670 QRAAAAAAAAAAAAASVGGTIPGPGPGGGQGPGEGGEGQTA-RGGSPGSDRVSETGKG 726 >gi|169169677 PREDICTED: hypothetical protein [Homo sapiens] Length = 167 Score = 35.0 bits (79), Expect = 0.050 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 29 GRRGVSQAPTAAR---SEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAA 85 G R + +A T R + G +E AGP EE G G V P +PG QAA Sbjct: 60 GERWLGRAHTLGRVGGAAGPTQEAPAGP-EEVTPGTARGRVRAEGYGRHQPKAPGGRQAA 118 Query: 86 EGAPEHHRSRRCTC 99 P + R C Sbjct: 119 PAMPSNRDQRLAGC 132 >gi|122937321 UNC homeobox [Homo sapiens] Length = 531 Score = 34.7 bits (78), Expect = 0.065 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 31 RGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAAEGAPE 90 R ++ A GDC + AG AGP AP+ GP P SP +E A G PE Sbjct: 461 RDLASAAATEGGGGDCAD--AG-----TAGPAPPPPAPSPRPGPRPPSPAEEPATCGVPE 513 >gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H subunit isoform b [Homo sapiens] Length = 2347 Score = 34.3 bits (77), Expect = 0.085 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 23 SQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPG 80 S+SGD+ RGV + R GD + P GPG G+ A Q +PG PG Sbjct: 717 SESGDSDGRGVYEFTQDVR-HGDRWDPTRPPRATDTPGPGPGSPQRRAQQRAAPGEPG 773 >gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H subunit isoform a [Homo sapiens] Length = 2353 Score = 34.3 bits (77), Expect = 0.085 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 23 SQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPG 80 S+SGD+ RGV + R GD + P GPG G+ A Q +PG PG Sbjct: 717 SESGDSDGRGVYEFTQDVR-HGDRWDPTRPPRATDTPGPGPGSPQRRAQQRAAPGEPG 773 >gi|23397672 homeobox D4 [Homo sapiens] Length = 255 Score = 33.1 bits (74), Expect = 0.19 Identities = 14/31 (45%), Positives = 16/31 (51%) Query: 59 AGPGEGTVAPTALQGPSPGSPGQEQAAEGAP 89 +GPG G+ P G PG PG AA G P Sbjct: 65 SGPGPGSALPARGHGQEPGGPGGHYAAPGEP 95 >gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] Length = 664 Score = 33.1 bits (74), Expect = 0.19 Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 20/104 (19%) Query: 20 VPCSQSGDAGRRGVSQAPTA---------------ARSEGDCEETVAGPGEETVAGPGEG 64 VP +G GR AP+A + G +VAGP EE + PG Sbjct: 108 VPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLV-PGSP 166 Query: 65 TVA----PTALQGPSPGSPGQEQAAEGAPEHHRSRRCTCFTYKD 104 +A P+A GPSP SP A+ R F+++D Sbjct: 167 EIAAPLPPSASLGPSPSSPRVPGGADPIQSSALPYRSQTFSFQD 210 >gi|6912446 potassium voltage-gated channel, subfamily H, member 4 [Homo sapiens] Length = 1017 Score = 32.7 bits (73), Expect = 0.25 Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 7/131 (5%) Query: 28 AGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAAEG 87 A +G P S+G CE T G E + T + L GP P ++ + Sbjct: 32 ANAQGTRGFPIVYCSDGFCELTGYGRTEVM-----QKTCSCRFLYGPETSEPALQRLHKA 86 Query: 88 APEHHRSRRCTCFTYKDKECVYYCHLDIIWINTPEQTVPYGLSNYRG-SFRGKRSAGPLP 146 H R CF KD ++C LD++ I V L +++ + G GP Sbjct: 87 LEGHQEHRAEICFYRKDGS-AFWCLLDMMPIKNEMGEVVLFLFSFKDITQSGSPGLGPQG 145 Query: 147 GNLQLSHRPHL 157 G +H L Sbjct: 146 GRGDSNHENSL 156 >gi|239754668 PREDICTED: mucin 12 [Homo sapiens] Length = 1952 Score = 32.7 bits (73), Expect = 0.25 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + GP+ SPG A+ P Sbjct: 580 GVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGP 639 Query: 90 EH 91 E+ Sbjct: 640 EY 641 >gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] Length = 861 Score = 32.7 bits (73), Expect = 0.25 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + GP+ SPG A+ P Sbjct: 515 GVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGP 574 Query: 90 EH 91 E+ Sbjct: 575 EY 576 >gi|239743293 PREDICTED: mucin 12 [Homo sapiens] Length = 5478 Score = 32.7 bits (73), Expect = 0.25 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + GP+ SPG A+ P Sbjct: 659 GVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGP 718 Query: 90 EH 91 E+ Sbjct: 719 EY 720 Score = 29.3 bits (64), Expect = 2.7 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + G + SPG A+ P Sbjct: 1714 GVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGP 1773 Query: 90 E 90 E Sbjct: 1774 E 1774 Score = 29.3 bits (64), Expect = 2.7 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + G + SPG A+ P Sbjct: 3271 GVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGP 3330 Query: 90 E 90 E Sbjct: 3331 E 3331 >gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo sapiens] Length = 2036 Score = 32.7 bits (73), Expect = 0.25 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + GP+ SPG A+ P Sbjct: 146 GVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGP 205 Query: 90 EH 91 E+ Sbjct: 206 EY 207 Score = 29.3 bits (64), Expect = 2.7 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 32 GVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPG--SPGQEQAAEGAP 89 GVS+ T + S T A PG T+ G + + A + G + SPG A+ P Sbjct: 1201 GVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGP 1260 Query: 90 E 90 E Sbjct: 1261 E 1261 >gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] Length = 2944 Score = 32.7 bits (73), Expect = 0.25 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Query: 21 PCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPS-PGSP 79 P GD G RG P A +GD + GE GPGEG +AP P PGSP Sbjct: 1378 PRGPLGDPGPRGPPGLPGTAM-KGDKGDR----GERGPPGPGEGGIAPGEPGLPGLPGSP 1432 Query: 80 GQE 82 G + Sbjct: 1433 GPQ 1435 >gi|150378478 PR domain containing 8 [Homo sapiens] Length = 689 Score = 32.7 bits (73), Expect = 0.25 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 12/93 (12%) Query: 9 FGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEE-TVAGPG---EETVAGPGEG 64 FGL P ++G+A R + AAR+ EE T G G E+ AG G G Sbjct: 362 FGLEENGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGG 421 Query: 65 TVAPTA--------LQGPSPGSPGQEQAAEGAP 89 + P A L P PG P + G+P Sbjct: 422 SSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSP 454 Score = 28.1 bits (61), Expect = 6.1 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 15 SAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGP 74 +A G S+ DAG G S P AA + G E + P G P+ L+G Sbjct: 403 TADGAGVASEDQDAGGGGGSSTPAAA----------SPVGAEKLLAPRPGGPLPSRLEG- 451 Query: 75 SPGSPGQEQAAEGAPE 90 GSP + A P+ Sbjct: 452 --GSPARGSAFTSVPQ 465 >gi|150378439 PR domain containing 8 [Homo sapiens] Length = 689 Score = 32.7 bits (73), Expect = 0.25 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 12/93 (12%) Query: 9 FGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEE-TVAGPG---EETVAGPGEG 64 FGL P ++G+A R + AAR+ EE T G G E+ AG G G Sbjct: 362 FGLEENGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGG 421 Query: 65 TVAPTA--------LQGPSPGSPGQEQAAEGAP 89 + P A L P PG P + G+P Sbjct: 422 SSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSP 454 Score = 28.1 bits (61), Expect = 6.1 Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 15 SAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGP 74 +A G S+ DAG G S P AA + G E + P G P+ L+G Sbjct: 403 TADGAGVASEDQDAGGGGGSSTPAAA----------SPVGAEKLLAPRPGGPLPSRLEG- 451 Query: 75 SPGSPGQEQAAEGAPE 90 GSP + A P+ Sbjct: 452 --GSPARGSAFTSVPQ 465 >gi|239743739 PREDICTED: hypothetical protein XP_002342949 [Homo sapiens] Length = 94 Score = 32.3 bits (72), Expect = 0.32 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 8 LFGLTVTSAAGFVPCSQSGDAGRRGVSQAPTAARSEGDCEETVAGPGEETVAGPGEGTVA 67 + +TVT AA ++G+A S AP + + + G+ AG G + Sbjct: 1 MVAVTVTKAAARASRMRTGEAD----SPAPPPLTRQSQAADLLKNGGDAAAAGTGAAVLE 56 Query: 68 PTALQGPSPGSPGQEQAAEGA 88 A PG+ G ++ GA Sbjct: 57 VAAAAAAQPGAAGGKRTTRGA 77 >gi|5031943 nescient helix loop helix 1 [Homo sapiens] Length = 133 Score = 32.3 bits (72), Expect = 0.32 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 37 PTAARSEGDCEETVAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQAAEGAPEHHRSRR 96 PT + +E + G G + G G G +GP PG PG++ + E R RR Sbjct: 14 PTHSETESGFSDCGGGAGPD---GAGPGGPGGGQARGPEPGEPGRKDLQHLSREERRRRR 70 Query: 97 CTCFTYK 103 Y+ Sbjct: 71 RATAKYR 77 >gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sapiens] Length = 402 Score = 32.3 bits (72), Expect = 0.32 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Query: 25 SGDAGRRGVSQAPTAARSEGDCEETVAGPG-EETVAGPGEGTVAPTALQGPSPGSPGQEQ 83 +GD+G G + P AA ++G E+ AG G E G G+ + S S G +Q Sbjct: 99 AGDSGE-GPRRLPEAAAAKGGPGESEAGAGGERERRGAGDQPETRSVCSSRSSSSGGGDQ 157 Query: 84 AAEGAPEHHRSRRCTCF 100 A +HH+ CF Sbjct: 158 RAGHQHQHHQPICKICF 174 >gi|18201900 T-box 6 [Homo sapiens] Length = 436 Score = 32.0 bits (71), Expect = 0.42 Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 11/76 (14%) Query: 31 RGVSQAPTAARSEGD-----CEETVAGPGEET----VAGPGEGTVAPTAL-QGPSPGSPG 80 RG A T A GD C+ T+ G E+ PGE T AP L GPS + Sbjct: 291 RGPEPAATEAYGSGDTPGGPCDSTLGGDIRESDPEQAPAPGEATAAPAPLCGGPSAEAYL 350 Query: 81 QEQAA-EGAPEHHRSR 95 AA GAP H +R Sbjct: 351 LHPAAFHGAPSHLPTR 366 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.133 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,509,538 Number of Sequences: 37866 Number of extensions: 558004 Number of successful extensions: 3301 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 170 Number of HSP's that attempted gapping in prelim test: 3006 Number of HSP's gapped (non-prelim): 440 length of query: 219 length of database: 18,247,518 effective HSP length: 98 effective length of query: 121 effective length of database: 14,536,650 effective search space: 1758934650 effective search space used: 1758934650 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.