Guide to the Human Genome
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Name: LOC730036 Sequence: fasta or formatted (664aa) NCBI GI: 239745235
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {562aa} PREDICTED: similar to taste receptor protein 1
alt prot {562aa} PREDICTED: similar to taste receptor protein 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         64           2
 C cysteine            0.6          4           1
 D aspartate           2.9         19           1
 E glutamate           4.7         31           2
 F phenylalanine       3.2         21           2
 G glycine             7.4         49           2
 H histidine           2.0         13           2
 I isoleucine          3.9         26           2
 K lysine              3.0         20           2
 L leucine            13.7         91           3
 M methionine          1.5         10           1
 N asparagine          2.4         16           1
 P proline            10.8         72           2
 Q glutamine           5.4         36           2
 R arginine            4.4         29           2
 S serine              9.6         64           3
 T threonine           5.4         36           2
 V valine              6.6         44           3
 W tryptophan          1.4          9           1
 Y tyrosine            1.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC730036             0.622   PREDICTED: similar to taste receptor protein 1 [Hom...
LOC730036             0.622   PREDICTED: similar to taste receptor protein 1 [Hom...
MYO16                 0.021   myosin heavy chain Myr 8 
MUC7                  0.020   mucin 7, secreted precursor 
MUC7                  0.020   mucin 7, secreted precursor 
MUC7                  0.020   mucin 7, secreted precursor 
MED25                 0.020   mediator complex subunit 25 
IMPG2                 0.019   interphotoreceptor matrix proteoglycan 2 
WBP11                 0.018   WW domain binding protein 11 
KIAA1522              0.017   hypothetical protein LOC57648 
SHANK1                0.017   SH3 and multiple ankyrin repeat domains 1 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
PRAM1                 0.017   PML-RARA regulated adaptor molecule 1 
CASKIN1               0.015   CASK interacting protein 1 
CEL                   0.015   carboxyl ester lipase precursor 
MAGEE1                0.015   melanoma antigen family E, 1 
ZMYM3                 0.015   zinc finger protein 261 
ZMYM3                 0.015   zinc finger protein 261 
BIN2                  0.015   bridging integrator 2 
FLJ22184              0.015   PREDICTED: hypothetical protein LOC80164 
INTS12                0.015   integrator complex subunit 12 
INTS12                0.015   integrator complex subunit 12 
DUSP8                 0.015   dual specificity phosphatase 8 
GRID2IP               0.014   glutamate receptor, ionotropic, delta 2 (Grid2) int...
IMPG1                 0.014   interphotoreceptor matrix proteoglycan 1 
NUP214                0.014   nucleoporin 214kDa 
LOC728888             0.014   PREDICTED: similar to acyl-CoA synthetase medium-ch...
MYPOP                 0.014   Myb protein P42POP 
NACA                  0.014   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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