ISX 33302

Name: ISX	Sequence: fasta or formatted (245aa)		NCBI GI: 57232759
Description: intestine-specific homeobox		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 24 3 C cysteine 3.7 9 2 D aspartate 2.4 6 1 E glutamate 6.9 17 2 F phenylalanine 2.4 6 1 G glycine 6.1 15 1 H histidine 2.9 7 1 I isoleucine 4.9 12 1 K lysine 4.9 12 2 L leucine 9.0 22 2 M methionine 1.2 3 1 N asparagine 2.0 5 1 P proline 11.4 28 3 Q glutamine 5.7 14 2 R arginine 6.9 17 2 S serine 6.9 17 1 T threonine 6.1 15 2 V valine 3.3 8 1 W tryptophan 2.9 7 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 intestine-specific homeobox RAX 0.171 retina and anterior neural fold homeobox ALX4 0.163 aristaless-like homeobox 4 RAX2 0.163 retina and anterior neural fold homeobox 2 ALX3 0.152 aristaless-like homeobox 3 PAX3 0.150 paired box 3 isoform PAX3i PAX3 0.150 paired box 3 isoform PAX3g PAX3 0.150 paired box 3 isoform PAX3h PAX3 0.150 paired box 3 isoform PAX3e PAX3 0.150 paired box 3 isoform PAX3d PAX3 0.150 paired box 3 isoform PAX3 ARX 0.146 aristaless related homeobox ALX1 0.146 cartilage paired-class homeoprotein 1 PRRX2 0.146 paired related homeobox 2 PAX7 0.140 paired box 7 isoform 2 PAX7 0.140 paired box 7 isoform 1 PAX7 0.140 paired box 7 isoform 3 SHOX2 0.138 short stature homeobox 2 isoform a VSX1 0.138 visual system homeobox 1 isoform a PAX6 0.138 paired box gene 6 isoform a PAX6 0.138 paired box gene 6 isoform b PAX6 0.138 paired box gene 6 isoform a OTP 0.136 PREDICTED: orthopedia homeobox PHOX2A 0.136 paired-like homeobox 2a OTP 0.136 orthopedia homeobox PHOX2B 0.134 paired-like homeobox 2b PRRX1 0.134 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.134 paired mesoderm homeobox 1 isoform pmx-1b DRGX 0.134 dorsal root ganglia homeobox VSX2 0.130 visual system homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.