WDR78 30196

Name: WDR78	Sequence: fasta or formatted (848aa)		NCBI GI: 46276887
Description: WD repeat domain 78 isoform 1		Referenced in: Dynein and Dynactin WD Repeat Proteins
Other entries for this name: alt prot [545aa] WD repeat domain 78 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 53 3 C cysteine 1.4 12 2 D aspartate 5.3 45 1 E glutamate 7.9 67 5 F phenylalanine 3.2 27 2 G glycine 5.9 50 2 H histidine 2.0 17 1 I isoleucine 5.2 44 2 K lysine 7.2 61 2 L leucine 8.0 68 2 M methionine 2.1 18 2 N asparagine 5.1 43 2 P proline 5.3 45 2 Q glutamine 3.9 33 2 R arginine 3.8 32 1 S serine 9.4 80 3 T threonine 6.6 56 2 V valine 6.5 55 2 W tryptophan 1.9 16 2 Y tyrosine 3.1 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 78 isoform 1 WDR78 0.607 WD repeat domain 78 isoform 2 DNAI1 0.125 dynein, axonemal, intermediate chain 1 DYNC1I2 0.062 dynein, cytoplasmic 1, intermediate chain 2 WDR34 0.054 WD repeat domain 34 DYNC1I1 0.053 dynein, cytoplasmic 1, intermediate chain 1 isoform a... DYNC1I1 0.053 dynein, cytoplasmic 1, intermediate chain 1 isoform... DYNC1I1 0.053 dynein, cytoplasmic 1, intermediate chain 1 isoform... DNAI2 0.046 dynein, axonemal, intermediate polypeptide 2 WDR38 0.016 WD repeat domain 38 GRWD1 0.014 glutamate-rich WD repeat containing 1 CDC40 0.014 cell division cycle 40 homolog CORO2B 0.014 coronin, actin binding protein, 2B SEC13 0.013 SEC13 protein isoform 2 SEC13 0.013 SEC13 protein isoform 1 HIRA 0.012 HIR histone cell cycle regulation defective homolog ... RBBP4 0.012 retinoblastoma binding protein 4 isoform c RBBP4 0.012 retinoblastoma binding protein 4 isoform b RBBP4 0.012 retinoblastoma binding protein 4 isoform a TAF5 0.012 TBP-associated factor 5 TAF5L 0.012 PCAF associated factor 65 beta isoform a RBBP7 0.012 retinoblastoma binding protein 7 WDR70 0.012 WD repeat domain 70 WDR77 0.011 WD repeat domain 77 WDR44 0.011 WD repeat domain 44 protein TBL1XR1 0.011 transducin (beta)-like 1 X-linked receptor 1 TBL1Y 0.011 transducin beta-like 1Y TBL1Y 0.011 transducin beta-like 1Y TBL1Y 0.011 transducin beta-like 1Y WDHD1 0.010 WD repeat and HMG-box DNA binding protein 1 isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.