Guide to the Human Genome
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Name: CORO2B Sequence: fasta or formatted (480aa) NCBI GI: 148529011
Description:

coronin, actin binding protein, 2B

Referenced in:

Cytoskeleton
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         16           1
 C cysteine            2.1         10           1
 D aspartate           5.2         25           1
 E glutamate           7.1         34           3
 F phenylalanine       3.5         17           2
 G glycine             6.7         32           3
 H histidine           2.3         11           1
 I isoleucine          6.5         31           2
 K lysine              6.7         32           2
 L leucine            10.2         49           2
 M methionine          3.1         15           1
 N asparagine          5.6         27           2
 P proline             5.6         27           2
 Q glutamine           2.7         13           2
 R arginine            6.7         32           2
 S serine              5.8         28           2
 T threonine           5.2         25           3
 V valine              6.9         33           3
 W tryptophan          1.7          8           1
 Y tyrosine            3.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coronin, actin binding protein, 2B 
CORO2A                0.671   coronin, actin binding protein, 2A 
CORO2A                0.671   coronin, actin binding protein, 2A 
CORO1C                0.408   coronin, actin binding protein, 1C isoform 1 
CORO6                 0.401   coronin 6 
CORO1A                0.399   coronin, actin binding protein, 1A 
CORO1B                0.395   coronin, actin binding protein, 1B 
CORO1B                0.395   coronin, actin binding protein, 1B 
CORO7                 0.191   coronin 7 
WDR5                  0.057   WD repeat domain 5 
WDR5                  0.057   WD repeat domain 5 
WDR5B                 0.051   WD repeat domain 5B 
TBL1XR1               0.047   transducin (beta)-like 1 X-linked receptor 1 
RBBP7                 0.044   retinoblastoma binding protein 7 
RBBP4                 0.044   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.044   retinoblastoma binding protein 4 isoform b 
RBBP4                 0.044   retinoblastoma binding protein 4 isoform a 
TBL1X                 0.043   transducin beta-like 1X isoform b 
TBL1X                 0.043   transducin beta-like 1X isoform b 
TBL1X                 0.043   transducin beta-like 1X isoform a 
TBL1X                 0.043   transducin beta-like 1X isoform a 
TBL1Y                 0.042   transducin beta-like 1Y 
TBL1Y                 0.042   transducin beta-like 1Y 
TBL1Y                 0.042   transducin beta-like 1Y 
WSB1                  0.042   WD repeat and SOCS box-containing 1 isoform 1 
WSB1                  0.042   WD repeat and SOCS box-containing 1 isoform 2 
WDR69                 0.040   WD repeat domain 69 
CDC40                 0.039   cell division cycle 40 homolog 
CIAO1                 0.037   WD repeat domain 39 
PRPF4                 0.036   PRP4 pre-mRNA processing factor 4 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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