Guide to the Human Genome
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Name: DNAI1 Sequence: fasta or formatted (699aa) NCBI GI: 6912338
Description:

dynein, axonemal, intermediate chain 1

Referenced in:

Dynein and Dynactin
Left-Right Axis
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         46           2
 C cysteine            1.1          8           1
 D aspartate           6.7         47           2
 E glutamate           7.2         50           3
 F phenylalanine       3.4         24           2
 G glycine             5.0         35           1
 H histidine           2.9         20           1
 I isoleucine          4.7         33           3
 K lysine              9.3         65           2
 L leucine             6.7         47           3
 M methionine          2.4         17           1
 N asparagine          4.4         31           2
 P proline             5.3         37           3
 Q glutamine           4.7         33           1
 R arginine            3.7         26           2
 S serine              7.3         51           2
 T threonine           6.0         42           2
 V valine              7.0         49           1
 W tryptophan          1.6         11           1
 Y tyrosine            3.9         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein, axonemal, intermediate chain 1 
WDR78                 0.151   WD repeat domain 78 isoform 1 
DNAI2                 0.074   dynein, axonemal, intermediate polypeptide 2 
DYNC1I2               0.059   dynein, cytoplasmic 1, intermediate chain 2 
DYNC1I1               0.056   dynein, cytoplasmic 1, intermediate chain 1 isoform a...
DYNC1I1               0.056   dynein, cytoplasmic 1, intermediate chain 1 isoform...
DYNC1I1               0.056   dynein, cytoplasmic 1, intermediate chain 1 isoform...
WDR34                 0.046   WD repeat domain 34 
WDR78                 0.031   WD repeat domain 78 isoform 2 
TBL1Y                 0.019   transducin beta-like 1Y 
TBL1Y                 0.019   transducin beta-like 1Y 
TBL1Y                 0.019   transducin beta-like 1Y 
RBBP4                 0.019   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.019   retinoblastoma binding protein 4 isoform b 
RBBP4                 0.019   retinoblastoma binding protein 4 isoform a 
RBBP7                 0.019   retinoblastoma binding protein 7 
TBL1X                 0.018   transducin beta-like 1X isoform b 
TBL1X                 0.018   transducin beta-like 1X isoform b 
TBL1X                 0.018   transducin beta-like 1X isoform a 
TBL1X                 0.018   transducin beta-like 1X isoform a 
TBL1XR1               0.017   transducin (beta)-like 1 X-linked receptor 1 
WDR51B                0.016   WD repeat domain 51B 
ERCC8                 0.015   excision repair cross-complementing rodent repair def...
DCAF13                0.014   WD repeats and SOF1 domain containing 
SEC31A                0.014   SEC31 homolog A isoform 3 
SEC31A                0.014   SEC31 homolog A isoform 1 
SEC31A                0.014   SEC31 homolog A isoform 4 
SEC31A                0.014   SEC31 homolog A isoform 2 
SEC31A                0.014   SEC31 homolog A isoform 1 
WDR17                 0.012   WD repeat domain 17 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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