Guide to the Human Genome
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Name: OLFM4 Sequence: fasta or formatted (510aa) NCBI GI: 32313593
Description:

olfactomedin 4 precursor

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         22           2
 C cysteine            1.0          5           1
 D aspartate           5.1         26           2
 E glutamate           5.7         29           2
 F phenylalanine       3.7         19           2
 G glycine             6.7         34           2
 H histidine           1.0          5           1
 I isoleucine          4.3         22           1
 K lysine              5.3         27           2
 L leucine            10.6         54           3
 M methionine          2.2         11           1
 N asparagine          6.9         35           3
 P proline             4.1         21           3
 Q glutamine           3.9         20           1
 R arginine            4.1         21           2
 S serine              9.2         47           4
 T threonine           6.9         35           2
 V valine              8.2         42           2
 W tryptophan          1.2          6           1
 Y tyrosine            5.7         29           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactomedin 4 precursor 
OLFM1                 0.149   olfactomedin related ER localized protein isoform 1 ...
OLFM2                 0.134   olfactomedin 2 
OLFM3                 0.129   olfactomedin 3 
MYOC                  0.117   myocilin 
LPHN3                 0.113   latrophilin 3 precursor 
LPHN2                 0.107   latrophilin 2 precursor 
LPHN1                 0.107   latrophilin 1 isoform 1 precursor 
LPHN1                 0.107   latrophilin 1 isoform 2 precursor 
OLFML2A               0.086   olfactomedin-like 2A 
OLFML2B               0.084   olfactomedin-like 2B 
GLDN                  0.067   gliomedin 
OLFML1                0.061   olfactomedin-like 1 
OLFML3                0.050   olfactomedin-like 3 
AKAP9                 0.015   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.015   A-kinase anchor protein 9 isoform 3 
TAX1BP1               0.014   Tax1 (human T-cell leukemia virus type I) binding p...
TAX1BP1               0.014   Tax1 (human T-cell leukemia virus type I) binding pr...
CXorf15               0.013   gamma-taxilin 
TNRC18                0.012   trinucleotide repeat containing 18 
GCC2                  0.012   GRIP and coiled-coil domain-containing 2 
KCNQ5                 0.012   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.012   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.012   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.012   potassium voltage-gated channel, KQT-like subfamily,...
CDSN                  0.011   corneodesmosin precursor 
CNTLN                 0.011   centlein isoform 1 
C6orf97               0.010   hypothetical protein LOC80129 
RLIM                  0.010   ring finger protein, LIM domain interacting 
RLIM                  0.010   ring finger protein, LIM domain interacting 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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