Guide to the Human Genome
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Name: OLFML2A Sequence: fasta or formatted (652aa) NCBI GI: 116014339
Description:

olfactomedin-like 2A

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         53           4
 C cysteine            1.7         11           1
 D aspartate           5.7         37           2
 E glutamate           6.4         42           2
 F phenylalanine       2.3         15           1
 G glycine             6.0         39           1
 H histidine           2.3         15           2
 I isoleucine          2.5         16           2
 K lysine              5.8         38           2
 L leucine             9.4         61           4
 M methionine          1.7         11           1
 N asparagine          3.5         23           1
 P proline             6.3         41           2
 Q glutamine           4.4         29           3
 R arginine            6.6         43           2
 S serine              7.5         49           2
 T threonine           7.2         47           4
 V valine              6.6         43           2
 W tryptophan          1.7         11           1
 Y tyrosine            4.3         28           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactomedin-like 2A 
OLFML2B               0.420   olfactomedin-like 2B 
LPHN3                 0.129   latrophilin 3 precursor 
OLFM2                 0.127   olfactomedin 2 
LPHN1                 0.126   latrophilin 1 isoform 1 precursor 
LPHN1                 0.126   latrophilin 1 isoform 2 precursor 
LPHN2                 0.126   latrophilin 2 precursor 
OLFM1                 0.118   olfactomedin related ER localized protein isoform 1 ...
MYOC                  0.113   myocilin 
OLFM3                 0.107   olfactomedin 3 
OLFML1                0.072   olfactomedin-like 1 
GLDN                  0.071   gliomedin 
OLFML3                0.070   olfactomedin-like 3 
OLFM4                 0.066   olfactomedin 4 precursor 
TCERG1                0.011   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.011   transcription elongation regulator 1 isoform 1 [Homo...
GGA3                  0.011   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.011   ADP-ribosylation factor binding protein 3 isoform lo...
TET2                  0.010   tet oncogene family member 2 isoform b 
TET2                  0.010   tet oncogene family member 2 isoform a 
LOC728351             0.009   PREDICTED: hypothetical protein 
ARHGEF15              0.009   Rho guanine exchange factor 15 
PCYT1B                0.009   choline phosphate cytidylyltransferase 1 beta isofo...
PCYT1B                0.009   choline phosphate cytidylyltransferase 1 beta isofor...
CEP63                 0.009   centrosomal protein 63 isoform b 
CEP63                 0.009   centrosomal protein 63 isoform a 
CADM1                 0.009   immunoglobulin superfamily, member 4D isoform 1 [Ho...
MAGEE1                0.009   melanoma antigen family E, 1 
MUC17                 0.009   mucin 17 
BAT2D1                0.009   HBxAg transactivated protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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