Guide to the Human Genome
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Name: OLFM3 Sequence: fasta or formatted (458aa) NCBI GI: 166706897
Description:

olfactomedin 3

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         25           1
 C cysteine            1.3          6           1
 D aspartate           5.2         24           2
 E glutamate           5.7         26           2
 F phenylalanine       3.7         17           1
 G glycine             5.2         24           2
 H histidine           2.0          9           1
 I isoleucine          5.2         24           3
 K lysine              6.8         31           2
 L leucine            10.0         46           4
 M methionine          3.3         15           1
 N asparagine          5.7         26           2
 P proline             2.6         12           1
 Q glutamine           5.5         25           1
 R arginine            4.6         21           1
 S serine              7.2         33           2
 T threonine           7.4         34           1
 V valine              5.5         25           2
 W tryptophan          1.7          8           1
 Y tyrosine            5.9         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactomedin 3 
OLFM1                 0.659   olfactomedin related ER localized protein isoform 1 ...
OLFM2                 0.621   olfactomedin 2 
MYOC                  0.194   myocilin 
LPHN3                 0.194   latrophilin 3 precursor 
LPHN2                 0.184   latrophilin 2 precursor 
OLFML2B               0.182   olfactomedin-like 2B 
LPHN1                 0.178   latrophilin 1 isoform 1 precursor 
LPHN1                 0.177   latrophilin 1 isoform 2 precursor 
OLFML2A               0.155   olfactomedin-like 2A 
OLFM4                 0.142   olfactomedin 4 precursor 
OLFM1                 0.139   olfactomedin related ER localized protein isoform 2 [...
OLFML3                0.113   olfactomedin-like 3 
GLDN                  0.105   gliomedin 
OLFML1                0.098   olfactomedin-like 1 
SMC3                  0.018   structural maintenance of chromosomes 3 
MYO18A                0.017   myosin 18A isoform b 
MYO18A                0.017   myosin 18A isoform a 
TMCC1                 0.015   transmembrane and coiled-coil domain family 1 isofor...
TMCC1                 0.015   transmembrane and coiled-coil domain family 1 isofo...
TMCC1                 0.015   transmembrane and coiled-coil domain family 1 isofo...
CENPE                 0.015   centromere protein E 
CCDC144A              0.014   coiled-coil domain containing 144A 
TMCC2                 0.013   transmembrane and coiled-coil domain family 2 
FKBP15                0.013   FK506 binding protein 15, 133kDa 
CCDC73                0.013   sarcoma antigen NY-SAR-79 
CGN                   0.012   cingulin 
GOLGA3                0.012   Golgi autoantigen, golgin subfamily a, 3 
TTC3                  0.012   tetratricopeptide repeat domain 3 
TTC3                  0.012   tetratricopeptide repeat domain 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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