Guide to the Human Genome
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Name: MIA2 Sequence: fasta or formatted (654aa) NCBI GI: 46094009
Description:

melanoma inhibitory activity 2

Referenced in:

Auditory and Vestibular Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         27           1
 C cysteine            0.9          6           1
 D aspartate           7.6         50           2
 E glutamate          13.5         88           2
 F phenylalanine       5.2         34           1
 G glycine             4.7         31           3
 H histidine           1.1          7           1
 I isoleucine          6.9         45           2
 K lysine              6.4         42           2
 L leucine             7.8         51           3
 M methionine          1.4          9           1
 N asparagine          4.4         29           2
 P proline             5.5         36           2
 Q glutamine           3.5         23           2
 R arginine            2.3         15           1
 S serine             10.1         66           3
 T threonine           5.0         33           1
 V valine              5.2         34           3
 W tryptophan          0.9          6           1
 Y tyrosine            3.4         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma inhibitory activity 2 
MIA3                  0.069   melanoma inhibitory activity family, member 3 [Homo...
OTOR                  0.037   otoraplin precursor 
MIA                   0.033   melanoma inhibitory activity 
C3orf63               0.014   retinoblastoma-associated protein 140 isoform b [Ho...
RP1L1                 0.012   retinitis pigmentosa 1-like 1 
TRIM44                0.011   DIPB protein 
PCDH15                0.010   protocadherin 15 isoform CD2-1 precursor 
IWS1                  0.009   IWS1 homolog 
PPP1R12B              0.009   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.009   protein phosphatase 1, regulatory (inhibitor) subunit...
MYT1L                 0.009   myelin transcription factor 1-like 
CMYA5                 0.009   cardiomyopathy associated 5 
ALPK2                 0.009   heart alpha-kinase 
ZNF462                0.008   zinc finger protein 462 
TP53BP1               0.008   tumor protein p53 binding protein 1 isoform 1 [Homo...
TP53BP1               0.008   tumor protein p53 binding protein 1 isoform 2 [Homo...
TP53BP1               0.008   tumor protein p53 binding protein 1 isoform 3 
FCHSD2                0.008   FCH and double SH3 domains 2 
G3BP2                 0.007   Ras-GTPase activating protein SH3 domain-binding pro...
AEBP2                 0.007   AE binding protein 2 isoform b 
AEBP2                 0.007   AE binding protein 2 isoform a 
SPTY2D1               0.007   SPT2, Suppressor of Ty, domain containing 1 
SMARCA2               0.007   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.007   SWI/SNF-related matrix-associated actin-dependent re...
SLC26A8               0.007   solute carrier family 26, member 8 isoform a 
RBM33                 0.007   RNA binding motif protein 33 
SLC26A8               0.007   solute carrier family 26, member 8 isoform b 
UPF3B                 0.007   UPF3 regulator of nonsense transcripts homolog B iso...
C13orf38              0.006   hypothetical protein LOC728591 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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