Guide to the Human Genome
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Name: FCHSD2 Sequence: fasta or formatted (740aa) NCBI GI: 182765466
Description:

FCH and double SH3 domains 2

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         56           3
 C cysteine            1.2          9           1
 D aspartate           5.8         43           3
 E glutamate           9.6         71           2
 F phenylalanine       3.0         22           1
 G glycine             3.4         25           1
 H histidine           2.3         17           1
 I isoleucine          3.4         25           2
 K lysine              7.0         52           3
 L leucine             8.9         66           2
 M methionine          2.0         15           1
 N asparagine          4.6         34           1
 P proline             5.4         40           4
 Q glutamine           6.4         47           2
 R arginine            5.8         43           2
 S serine              8.8         65           4
 T threonine           4.9         36           2
 V valine              5.8         43           2
 W tryptophan          1.1          8           1
 Y tyrosine            3.1         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FCH and double SH3 domains 2 
FCHSD1                0.290   FCH and double SH3 domains 1 
SRGAP2                0.044   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.044   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
ITSN1                 0.041   intersectin 1 isoform ITSN-l 
ITSN1                 0.040   intersectin 1 isoform ITSN-s 
FNBP1L                0.039   formin binding protein 1-like isoform 1 
FNBP1L                0.039   formin binding protein 1-like isoform 2 
TRIP10                0.038   thyroid hormone receptor interactor 10 
SRGAP3                0.038   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.038   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP4               0.037   Rho GTPase activating protein 4 
SRGAP1                0.034   SLIT-ROBO Rho GTPase activating protein 1 
ITSN2                 0.032   intersectin 2 isoform 3 
ITSN2                 0.032   intersectin 2 isoform 1 
ITSN2                 0.032   intersectin 2 isoform 2 
C1orf113              0.032   SH3 domain-containing protein C1orf113 isoform 1 [H...
NCK2                  0.032   NCK adaptor protein 2 isoform A 
NCK2                  0.032   NCK adaptor protein 2 isoform A 
BCAR1                 0.031   breast cancer anti-estrogen resistance 1 
LOC100133063          0.030   PREDICTED: similar to breast cancer anti-estrogen r...
NCK1                  0.030   NCK adaptor protein 1 
CD2AP                 0.029   CD2-associated protein 
FER                   0.028   fer (fps/fes related) tyrosine kinase 
LOC646079             0.028   PREDICTED: similar to breast cancer anti-estrogen r...
LOC646079             0.028   PREDICTED: similar to breast cancer anti-estrogen r...
LOC646079             0.028   PREDICTED: similar to breast cancer anti-estrogen r...
SH3KBP1               0.024   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.024   SH3-domain kinase binding protein 1 isoform a 
PACSIN2               0.023   protein kinase C and casein kinase substrate in neu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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